mRNA_C-tenellus_contig7473.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7473.1.1 vs. uniprot
Match: D7FVB1_ECTSI (ABC transporter, ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB1_ECTSI) HSP 1 Score: 298 bits (762), Expect = 1.150e-94 Identity = 152/190 (80.00%), Postives = 163/190 (85.79%), Query Frame = 1 Query: 1 PEVKKARPANIRLPIPPSCHEEQLSLSKASFGWGDGPPTVKGVDLNLQKGQTWAILGPNGAGKSTLLKALAGSLPLSEGERKEGEGLQIGVFTQDLAQDLPQDAVALELVLERVREYDIGVSDEQTRATLGGLGLTGPKALRKIGVLSGGEKARVALAIFVMIPYNMLMLDEPSNHLDVETLYSLVDAIK 570 PE K + A +RLP PP+CH Q+ L ASFGWGD PPT GV+L L+KGQT AILGPNGAGKSTLLKALAG LPLS GERKEGEGL+IGVFTQDLAQDLPQDA+ALELVL+RVRE+D VSDEQ R LG LGL GPKALRKIGVLSGGEKARVALAIFVMIPYN+LMLDEPSNHLD ETL SLVDAIK Sbjct: 327 PEGKSSFRAKMRLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSLGLQGPKALRKIGVLSGGEKARVALAIFVMIPYNLLMLDEPSNHLDAETLNSLVDAIK 516
BLAST of mRNA_C-tenellus_contig7473.1.1 vs. uniprot
Match: A0A835Z7Z5_9STRA (ABC transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z5_9STRA) HSP 1 Score: 251 bits (642), Expect = 7.090e-77 Identity = 133/203 (65.52%), Postives = 152/203 (74.88%), Query Frame = 1 Query: 10 KKARPANIRLPIPPSCHEEQLSLSKASFGWGDGPPTVKGVDLNLQKGQT---------WAILGPNGAGKSTLLKALAGSLPLSEGERKEGEGLQIGVFTQDLAQDLPQDAVALELVLERVREYDIGVSDEQTRATLGGLGLTGPKALRKIGVLSGGEKARVALAIFVMIPYNMLMLDEPSNHLDV-------ETLYSLVDAIK 570 +K A +RLP PPSCH++Q++L A++GWG PTV GVDL L KGQ ILGPNGAGKST L+A+AG LPL G R EGEGL +GVFTQDLAQDLPQDAVALE VL +VREYD +SDEQ R LGGLGLTGPKALR IG LSGGEKARVALAIF MIP+N+L+LDEPSNHLD +TL SLV+A+K Sbjct: 397 RKVMKARMRLPAPPSCHKDQITLKDAAYGWGGDAPTVAGVDLKLLKGQVALALCLPGRLVILGPNGAGKSTTLRAIAGLLPLQSGSRVEGEGLNMGVFTQDLAQDLPQDAVALEHVLHKVREYDTTISDEQARNVLGGLGLTGPKALRPIGWLSGGEKARVALAIFSMIPHNLLLLDEPSNHLDTGAWNALRKTLESLVEAVK 599
BLAST of mRNA_C-tenellus_contig7473.1.1 vs. uniprot
Match: W7TQL6_9STRA (Atp-binding cassette superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQL6_9STRA) HSP 1 Score: 206 bits (523), Expect = 4.860e-59 Identity = 105/183 (57.38%), Postives = 132/183 (72.13%), Query Frame = 1 Query: 28 NIRLPIPPSCHEEQLSLSKASFGWGDGPPTVKGVDLNLQKGQTWAILGPNGAGKSTLLKALAGSLPLSEG---ERKEGEGLQIGVFTQDLAQDLPQDAVALELVLERVREYDIGVSDEQTRATLGGLGLTGPKALRKIGVLSGGEKARVALAIFVMIPYNMLMLDEPSNHLDVETLYSLVDAI 567 ++R P PP E + L ASFG+ P VK VD L +G +LGPNG GKST+LKAL GSLP G ER GEGL++GVFTQDLAQDLPQ+ +AL+ VL VR+ D+ VSD+Q R LG LGLTG KA+R I LSGGEKARVAL++F ++P+N+L+LDEPSNHLDV T+ +L +A+ Sbjct: 377 HLRFPPPPKVMPELVKLQNASFGYPPAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQDLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGALGLTGEKAMRPISALSGGEKARVALSVFALLPHNLLVLDEPSNHLDVATMETLSEAL 559
BLAST of mRNA_C-tenellus_contig7473.1.1 vs. uniprot
Match: A0A7S0E8K4_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E8K4_9CRYP) HSP 1 Score: 195 bits (495), Expect = 4.830e-58 Identity = 94/188 (50.00%), Postives = 134/188 (71.28%), Query Frame = 1 Query: 7 VKKARPANIRLPIPPSCHEEQLSLSKASFGWGDGPPTVKGVDLNLQKGQTWAILGPNGAGKSTLLKALAGSLPLSEGERKEGEGLQIGVFTQDLAQDLPQDAVALELVLERVREYDIGVSDEQTRATLGGLGLTGPKALRKIGVLSGGEKARVALAIFVMIPYNMLMLDEPSNHLDVETLYSLVDAIK 570 ++ R + LP PP C + + + A GW P + + L++ +G ILGPNG GKSTLL ALAG LPLS+G R +GL +G+FTQDLAQ+L + AL++V+E V+E D ++ E+ RA +G LGLTG KAL++IG LSGGEKARVAL++FV++P+N+L+LDEPSNHLD+ T+ +L +A++ Sbjct: 30 LQTGRRPKLVLPEPPKCRMDMVVMKGAEVGWSTEKPLYRDLSLSITRGMRIVILGPNGCGKSTLLWALAGRLPLSKGSRTTTDGLSLGLFTQDLAQELDPSSTALDVVMESVQEVDPTINTERARAAMGALGLTGEKALQQIGTLSGGEKARVALSMFVLVPHNLLLLDEPSNHLDIPTIDALTEALR 217
BLAST of mRNA_C-tenellus_contig7473.1.1 vs. uniprot
Match: A0A7S0LZZ7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZZ7_9CRYP) HSP 1 Score: 197 bits (500), Expect = 6.490e-58 Identity = 98/189 (51.85%), Postives = 142/189 (75.13%), Query Frame = 1 Query: 4 EVKKARPANIRLPIPPSCHEEQLSLSKASFGWGDGPPTVKGVDLNLQKGQTWAILGPNGAGKSTLLKALAGSLPLSEGERKEGEGLQIGVFTQDLAQDLPQDAVALELVLERVREYDIGVSDEQTRATLGGLGLTGPKALRKIGVLSGGEKARVALAIFVMIPYNMLMLDEPSNHLDVETLYSLVDAIK 570 + + RP+ +R P P C + ++L+ A++GW +G P G + +++G AILGPNG GKSTLL AL+G LPL EG+R+ E L++GVFTQDLAQ+LP DAVAL++VL+ + D+ ++ E+ R +G LGL+G KAL+KIG +SGGEKARVAL++FV++P+N+L+LDEPSNHLDV T+ L +A++ Sbjct: 180 DTQADRPS-LRFPRPQFCEQRMVALAGAAWGW-NGRPLYSGCSVEVERGMRLAILGPNGCGKSTLLAALSGRLPLLEGKRETAEHLEMGVFTQDLAQELPLDAVALDVVLKHAQAKDMTINAERCRNVMGALGLSGSKALQKIGTMSGGEKARVALSMFVLVPHNLLLLDEPSNHLDVGTVEVLTEALQ 366
BLAST of mRNA_C-tenellus_contig7473.1.1 vs. uniprot
Match: A0A7S4JYL6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JYL6_GUITH) HSP 1 Score: 195 bits (496), Expect = 2.920e-55 Identity = 93/188 (49.47%), Postives = 134/188 (71.28%), Query Frame = 1 Query: 7 VKKARPANIRLPIPPSCHEEQLSLSKASFGWGDGPPTVKGVDLNLQKGQTWAILGPNGAGKSTLLKALAGSLPLSEGERKEGEGLQIGVFTQDLAQDLPQDAVALELVLERVREYDIGVSDEQTRATLGGLGLTGPKALRKIGVLSGGEKARVALAIFVMIPYNMLMLDEPSNHLDVETLYSLVDAIK 570 ++ R + LP PP C E + + A GW + P + + L++ +G ILGPNG GKSTLL ALAG LPL +G R +GL +G+FTQDLAQ+L + AL++V+E V+E D ++ E+ RA +G LGLTG K+L++IG LSGGEKARVAL++FV++P+N+L+LDEPSNHLD+ T+ +L +A++ Sbjct: 385 LQTGRRPKLVLPEPPKCRMEMVVMKDAEIGWSEEKPLYRDLSLSITRGMRVVILGPNGCGKSTLLWALAGRLPLIKGSRTTTDGLSLGLFTQDLAQELDPSSTALDVVMETVQEVDPSINTEKARAAMGALGLTGEKSLQQIGTLSGGEKARVALSMFVLVPHNLLLLDEPSNHLDIPTIDALTEALR 572
BLAST of mRNA_C-tenellus_contig7473.1.1 vs. uniprot
Match: A0A7S1ELZ7_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1ELZ7_HEMAN) HSP 1 Score: 194 bits (493), Expect = 4.330e-55 Identity = 99/178 (55.62%), Postives = 127/178 (71.35%), Query Frame = 1 Query: 37 LPIPPSCHEEQLSLSKASFGWGDGPPTVKGVDLNLQKGQTWAILGPNGAGKSTLLKALAGSLPLSEGERKEGEGLQIGVFTQDLAQDLPQDAVALELVLERVREYDIGVSDEQTRATLGGLGLTGPKALRKIGVLSGGEKARVALAIFVMIPYNMLMLDEPSNHLDVETLYSLVDAIK 570 P PP C LSLSKA+FGW + K +D+ ++KG ILGPNG GKSTLL AL+G L L G RK E L +G+FTQDLAQ+LP D AL +VLE + D + E+ RA +G LGLTG KAL+KIG +SGGEKARVAL++FV++P+N+L+LDEPSNHLDV T+ L +A++ Sbjct: 442 FPRPPVCETAMLSLSKATFGWNN-EAIYKDMDIEIEKGMRMCILGPNGCGKSTLLSALSGRLNLMSGTRKVSEQLDMGLFTQDLAQELPLDREALAVVLEHAQRKDPNIISERARAVMGALGLTGSKALQKIGTMSGGEKARVALSMFVLVPHNLLILDEPSNHLDVGTVEVLTEALQ 618
BLAST of mRNA_C-tenellus_contig7473.1.1 vs. uniprot
Match: A0A835WD87_9CHLO (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835WD87_9CHLO) HSP 1 Score: 193 bits (491), Expect = 4.090e-54 Identity = 102/190 (53.68%), Postives = 132/190 (69.47%), Query Frame = 1 Query: 16 ARPANIRLPIPPSCHEEQLSLSKASFGWGD-----GPPTVKGVDLNLQKGQTWAILGPNGAGKSTLLKALAGSLPLSEGERKEGEGLQIGVFTQDLAQDLPQDAVALELVLERVREYDIGVSDEQTRATLGGLGLTGPKALRKIGVLSGGEKARVALAIFVMIPYNMLMLDEPSNHLDVETLYSLVDAIK 570 AR ++LP P C+ E + L A+ GWG P + GV++ +++GQ +LGPNGAGKSTLLKA+AG+LPL GER G+G+++ VF+QDLAQDLP D ALE V R D G++ E+ R LG LGLTG AL+KIGVLSGGEKARVALA F ++P N+L+LDE SNHLD +T+ L A+K Sbjct: 453 ARKVALKLPRAPPCYTEAIKLKNAAVGWGTPGEPGSKPLINGVNVVIRRGQRVLVLGPNGAGKSTLLKAVAGNLPLWAGERVLGDGVRLAVFSQDLAQDLPLDMPALEYVEAVARANDPGITLEKCRQALGALGLTGTMALQKIGVLSGGEKARVALAAFALVPANVLLLDEASNHLDAQTIEVLTGALK 642
BLAST of mRNA_C-tenellus_contig7473.1.1 vs. uniprot
Match: A0A2V0NWY1_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NWY1_9CHLO) HSP 1 Score: 192 bits (488), Expect = 7.320e-54 Identity = 101/189 (53.44%), Postives = 128/189 (67.72%), Query Frame = 1 Query: 16 ARPANIRLPIPPSCHEEQLSLSKASFGWGDG----PPTVKGVDLNLQKGQTWAILGPNGAGKSTLLKALAGSLPLSEGERKEGEGLQIGVFTQDLAQDLPQDAVALELVLERVREYDIGVSDEQTRATLGGLGLTGPKALRKIGVLSGGEKARVALAIFVMIPYNMLMLDEPSNHLDVETLYSLVDAIK 570 AR ++LP PP C + + L + GWG+ P V GV+ +QKGQ +LGPNGAGKSTLLK + G L EG K GEG ++GVF+QDLAQ+LPQD VALE V ER RE D ++ E+ R LG LGLTG A++ IG LSGGEKARVALA+F ++P N+L+LDE SNHLD T+ L A++ Sbjct: 389 ARKVTLKLPTPPPCFTDVIELQGVAAGWGEPGEGRTPIVSGVNAVIQKGQRVLVLGPNGAGKSTLLKTVGGGLAPWEGRVKLGEGAKLGVFSQDLAQELPQDRVALEYVSERAREVDATITLEKCRQALGALGLTGSMAMQTIGSLSGGEKARVALAVFALVPANVLLLDEASNHLDAATIDVLTGALR 577
BLAST of mRNA_C-tenellus_contig7473.1.1 vs. uniprot
Match: A0A7S0RWN8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RWN8_9CHLO) HSP 1 Score: 191 bits (486), Expect = 7.400e-54 Identity = 101/183 (55.19%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 31 IRLPIPPSCHEEQLSLSKASFGWGDG---PPTVKGVDLNLQKGQTWAILGPNGAGKSTLLKALAGSLPLSEGERKEGEGLQIGVFTQDLAQDLPQDAVALELVLERVREYDIGVSDEQTRATLGGLGLTGPKALRKIGVLSGGEKARVALAIFVMIPYNMLMLDEPSNHLDVETLYSLVDAIK 570 ++LP P C + L L AS GWG PP + VDL ++KGQ +LGPNGAGKSTLLKAL G L L G RKEGEG+++ VF+QDLAQDLP AL+ V + R YD ++ E+ RA LG LGL G AL++IGVLSGGEKARVALA F ++P N+L+LDE SNHLD T+ L A++ Sbjct: 426 LKLPRAPPCFTDVLMLKGASVGWGTPGVLPPLLTNVDLTIKKGQRVLVLGPNGAGKSTLLKALGGQLALWSGSRKEGEGVKMAVFSQDLAQDLPLHKTALQYVEDTARAYDPNITLEKCRAALGALGLVGSMALQEIGVLSGGEKARVALAAFALVPSNVLLLDEASNHLDAATINVLTGALQ 608 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7473.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7473.1.1 >prot_C-tenellus_contig7473.1.1 ID=prot_C-tenellus_contig7473.1.1|Name=mRNA_C-tenellus_contig7473.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=190bp PEVKKARPANIRLPIPPSCHEEQLSLSKASFGWGDGPPTVKGVDLNLQKGback to top mRNA from alignment at C-tenellus_contig7473:27..4471+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7473.1.1 ID=mRNA_C-tenellus_contig7473.1.1|Name=mRNA_C-tenellus_contig7473.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4445bp|location=Sequence derived from alignment at C-tenellus_contig7473:27..4471+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7473:27..4471+ >mRNA_C-tenellus_contig7473.1.1 ID=mRNA_C-tenellus_contig7473.1.1|Name=mRNA_C-tenellus_contig7473.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=570bp|location=Sequence derived from alignment at C-tenellus_contig7473:27..4471+ (Choristocarpus tenellus KU2346)back to top |