mRNA_C-tenellus_contig7456.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7456.1.1
Unique NamemRNA_C-tenellus_contig7456.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7456.1.1 vs. uniprot
Match: R4X846_TAPDE (Uncharacterized protein n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4X846_TAPDE)

HSP 1 Score: 98.2 bits (243), Expect = 3.770e-22
Identity = 53/121 (43.80%), Postives = 73/121 (60.33%), Query Frame = 1
Query:    1 YTY-QGCFTDEVDDRRITIGFVENEAMTIEMCASICSKKGTSFFALEYASECFCGADDTNLTGTSKACTTPCSGDGSQLCGGNFAMSIYSFDYVITRETADVEGSTL--VGCLTDNIGARR 354
            Y Y +GCF D V+ R +   + E++AMT+E C + CS  G S+  LEYA++CFCG  +T   G    CTTPCSG+ ++ CGGN A+S+YS    +T +T    GS+   VGC  D   A R
Sbjct:  142 YIYSEGCFQDIVNYRALDGAYTESDAMTVEYCGTYCSGNGFSYAGLEYATQCFCG--NTVRLGPGSGCTTPCSGNSAETCGGNNALSLYS----LTGKTLQTSGSSSRSVGCFADYYPATR 256          
BLAST of mRNA_C-tenellus_contig7456.1.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.120e-17
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 1
Query:   13 GCFTDEVDDRRITIGFVENEAMTIEMCASICSKKGTSFFALEYASECFCGADDTNLT--GTSKACTTPCSGDGSQLCGGNFAMSIYSF 270
            GC+ DE D R +     +  +MT+EMC + CS  G ++F ++Y +ECFCG + T+L   G S AC   C GD  Q+CGG +AMS+YS+
Sbjct:  193 GCYQDESDARIMEFALTDTSSMTMEMCEAECS--GNTYFGMQYGTECFCGGESTDLLQHGESTACDYECPGDSEQVCGGFYAMSVYSY 278          
BLAST of mRNA_C-tenellus_contig7456.1.1 vs. uniprot
Match: D7FRS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS2_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 6.820e-17
Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = 1
Query:    4 TYQGCFTDEVDDRRITIGFVENEAMTIEMCASICSKKGTSFFALEYASECFCGADDTNLT--GTSKACTTPCSGDGSQLCGGNFAMSIYSF 270
            T+ GC+ DE D R + +   ++ +MT EMC + C+  G+++F ++Y  ECFCG   T+L   G S AC   C GD  +LCGG +AMS+YS+
Sbjct:  425 TFVGCYQDESDARIMELALTDSSSMTKEMCEAECT--GSTYFGMQYGRECFCGGSSTDLLQHGESTACDYECPGDSDELCGGFYAMSVYSY 513          
BLAST of mRNA_C-tenellus_contig7456.1.1 vs. uniprot
Match: D7FUE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE6_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 7.410e-17
Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = 1
Query:    4 TYQGCFTDEVDDRRITIGFVENEAMTIEMCASICSKKGTSFFALEYASECFCGADDTNLT--GTSKACTTPCSGDGSQLCGGNFAMSIYSF 270
            ++ GC+ DE D R + +   ++ +MT EMC + C+  G +FF ++Y  ECFCG   T+L   G S AC   C GD  Q+CGG +AMS+YS+
Sbjct:  729 SFVGCYQDESDARIMELALTDSSSMTKEMCEAECT--GNTFFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAMSVYSY 817          
BLAST of mRNA_C-tenellus_contig7456.1.1 vs. uniprot
Match: D7FTD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD8_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 8.660e-17
Identity = 38/91 (41.76%), Postives = 58/91 (63.74%), Query Frame = 1
Query:    4 TYQGCFTDEVDDRRITIGFVENEAMTIEMCASICSKKGTSFFALEYASECFCGADDTNLT--GTSKACTTPCSGDGSQLCGGNFAMSIYSF 270
            ++ GC+ DE D R + +   ++ +MT+E+C + C+  G ++F L+Y  ECFCG   T+L   G S AC   C GD  Q+CGG +AMS+YS+
Sbjct:  378 SFVGCYQDESDARIMELALTDSSSMTMEICEAECT--GNTYFGLQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAMSVYSY 466          
BLAST of mRNA_C-tenellus_contig7456.1.1 vs. uniprot
Match: D7FTD7_ECTSI (WSC domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD7_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 3.220e-16
Identity = 37/90 (41.11%), Postives = 56/90 (62.22%), Query Frame = 1
Query:    7 YQGCFTDEVDDRRITIGFVENEAMTIEMCASICSKKGTSFFALEYASECFCGADDTNLT--GTSKACTTPCSGDGSQLCGGNFAMSIYSF 270
            + GC+ DE   R + +   ++ +M++EMC + C  +G ++F L+Y  ECFCG   T+L   G S AC   C GD  Q+CGG +AMS+YS+
Sbjct:  303 FVGCYQDESGSRIMELALTDSSSMSMEMCEAKC--RGNTYFGLQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAMSVYSY 390          
BLAST of mRNA_C-tenellus_contig7456.1.1 vs. uniprot
Match: A0A0D2G4Y2_9EURO (Uncharacterized protein n=3 Tax=Fonsecaea TaxID=40354 RepID=A0A0D2G4Y2_9EURO)

HSP 1 Score: 81.6 bits (200), Expect = 1.220e-15
Identity = 35/89 (39.33%), Postives = 56/89 (62.92%), Query Frame = 1
Query:    4 TYQGCFTDEVDDRRIT-IGFVENEAMTIEMCASICSKKGTSFFALEYASECFCGADDTNLTGTSKACTTPCSGDGSQLCGGNFAMSIYS 267
            TYQGC+ + V  R +T   F  +  MT+E+CA+ CSK  ++FF  EY+ EC+CG   +       AC++ CSGD ++ CGG+  +S+++
Sbjct:  498 TYQGCYMEGVGGRALTGSSFSNSTGMTLELCAAFCSKTNSAFFGTEYSQECYCGGSISTAIAPQTACSSFCSGDKTEFCGGSSRLSVWA 586          
BLAST of mRNA_C-tenellus_contig7456.1.1 vs. uniprot
Match: UPI001E8D9F2B (uncharacterized protein n=1 Tax=Talaromyces proteolyticus TaxID=1131652 RepID=UPI001E8D9F2B)

HSP 1 Score: 80.1 bits (196), Expect = 4.370e-15
Identity = 39/121 (32.23%), Postives = 66/121 (54.55%), Query Frame = 1
Query:    1 YTYQGCFTDEVDDRRITIGFVENEAMTIEMCASICSKKGTSFFALEYASECFCGAD-DTNLTGTSKA-CTTPCSGDGSQLCGGNFAMSIYSFDYVITRETADVEGSTLVGCLTDNIGARRL 357
            Y+Y GC+TD+V+ R        +  MT+  C+S CS  G  +F  EY+++CFCG    ++ T T+ + C+  C GD ++ CGG   +S+Y+ +  +     ++ G   +GC  D   +R L
Sbjct:  542 YSYNGCYTDDVNSRTFQAATTSDNKMTLAECSSFCS--GYPYFGTEYSTQCFCGNSIGSSSTHTADSDCSMSCGGDSTEACGGPNRLSVYTNNNYVNPGGTNIPGYQYLGCYNDTAASRSL 660          
BLAST of mRNA_C-tenellus_contig7456.1.1 vs. uniprot
Match: D7FRS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 5.790e-15
Identity = 36/91 (39.56%), Postives = 56/91 (61.54%), Query Frame = 1
Query:    4 TYQGCFTDEVDDRRITIGFVENEAMTIEMCASICSKKGTSFFALEYASECFCGADDTNLT--GTSKACTTPCSGDGSQLCGGNFAMSIYSF 270
            ++ GC+ DE D R + +   ++ +MT E C + C+  G ++F ++Y  ECFCG   T+L   G S +C   C GD  Q+CGG +AMS+YS+
Sbjct:  840 SFVGCYQDESDARIMELALTDSSSMTKERCEAECT--GNTYFGMQYGRECFCGGSSTDLLQHGESTSCDYECPGDSDQVCGGFYAMSVYSY 928          
BLAST of mRNA_C-tenellus_contig7456.1.1 vs. uniprot
Match: A0A2T3B0B8_AMORE (Uncharacterized protein n=1 Tax=Amorphotheca resinae ATCC 22711 TaxID=857342 RepID=A0A2T3B0B8_AMORE)

HSP 1 Score: 78.6 bits (192), Expect = 1.420e-14
Identity = 38/120 (31.67%), Postives = 60/120 (50.00%), Query Frame = 1
Query:    1 YTYQGCFTDEVDDRRITIGF-VENEAMTIEMCASICSKKGTSFFALEYASECFCGADDTNLTGTSKACTTPCSGDGSQLCGGNFAMSIYSFDYVITRETADVEGSTLVGCLTDNIGARRL 357
            +TY GCF+D    R +     +  + MTIE C + C      +  LEY  ECFCGA    +      C+ PC+G+ S++CGGN  +S+Y      + + + +    L+GC ++    R L
Sbjct:   44 FTYAGCFSDPSSPRGLLYDSGLPTQNMTIETCVAFCKGNDYKYAGLEYYGECFCGASVNGVQLPESDCSFPCTGNSSEICGGNDILSVYQDPTFPSVDDSTISDYQLLGCYSEGTSGRSL 163          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7456.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R4X846_TAPDE3.770e-2243.80Uncharacterized protein n=1 Tax=Taphrina deformans... [more]
D8LEL0_ECTSI1.120e-1744.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FRS2_ECTSI6.820e-1742.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FUE6_ECTSI7.410e-1742.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTD8_ECTSI8.660e-1741.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTD7_ECTSI3.220e-1641.11WSC domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A0D2G4Y2_9EURO1.220e-1539.33Uncharacterized protein n=3 Tax=Fonsecaea TaxID=40... [more]
UPI001E8D9F2B4.370e-1532.23uncharacterized protein n=1 Tax=Talaromyces proteo... [more]
D7FRS1_ECTSI5.790e-1539.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2T3B0B8_AMORE1.420e-1431.67Uncharacterized protein n=1 Tax=Amorphotheca resin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7456contigC-tenellus_contig7456:2072..3146 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog5011.R4X846
PFAMsChitin_bind_1,DUF1929,Glyoxal_oxid_N,WSC
Model size357
Max annot lvl4751|Fungi
KEGG koko:K20929
Hectar predicted targeting categoryother localisation
Exons3
Evalue6.19e-23
EggNOG OGsKOG4157@1|root,KOG4157@2759|Eukaryota,38SZJ@33154|Opisthokonta,3NZH6@4751|Fungi
EC1.2.3.15
Descriptioncopper radical oxidase
Cds size357
COG categoryGO
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790037.0912313-CDS-C-tenellus_contig7456:2071..21581680790037.0912313-CDS-C-tenellus_contig7456:2071..2158Choristocarpus tenellus KU2346CDSC-tenellus_contig7456 2072..2158 +
1680790037.105425-CDS-C-tenellus_contig7456:2616..26781680790037.105425-CDS-C-tenellus_contig7456:2616..2678Choristocarpus tenellus KU2346CDSC-tenellus_contig7456 2617..2678 +
1680790037.1190898-CDS-C-tenellus_contig7456:2938..31461680790037.1190898-CDS-C-tenellus_contig7456:2938..3146Choristocarpus tenellus KU2346CDSC-tenellus_contig7456 2939..3146 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7456.1.1prot_C-tenellus_contig7456.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7456 2072..3146 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7456.1.1

>prot_C-tenellus_contig7456.1.1 ID=prot_C-tenellus_contig7456.1.1|Name=mRNA_C-tenellus_contig7456.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=119bp
YTYQGCFTDEVDDRRITIGFVENEAMTIEMCASICSKKGTSFFALEYASE
CFCGADDTNLTGTSKACTTPCSGDGSQLCGGNFAMSIYSFDYVITRETAD
VEGSTLVGCLTDNIGARRL
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mRNA from alignment at C-tenellus_contig7456:2072..3146+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7456.1.1 ID=mRNA_C-tenellus_contig7456.1.1|Name=mRNA_C-tenellus_contig7456.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1075bp|location=Sequence derived from alignment at C-tenellus_contig7456:2072..3146+ (Choristocarpus tenellus KU2346)
TACACTTATCAGGGCTGCTTCACAGACGAAGTAGATGACCGAAGGATAAC TATAGGGTTCGTGGAGAACGAAGCAATGACTATTGAGGTGGGTGTGTAAT TATGAGTAATCTGGCACAGTTTGAATTAGTGGCCACATATGAACAATGTG TGTGTGCGTGTGGTGTTCGCCTCTTTATCTACATTTTGATCAAATTTGCT TTTGGACAACTACATCTATTCATAAATTCACTGTTTGCTAAGTATCTGTA CGTATTCGGACAAGTTCAAATGTTGGAGAACCTATAGGTTCCTCTACGTG ACAATGCAAAAGTTTGCCAAGGCTAAACGTTTTACTATGGTTTGAATGAT CGTTATCGTTTTTTAATCCTCAATTCTGATGTAGCTCACATGTCCACATC TTTGGATTTTACTGGGGGCATATTGACTTCCATGTTGACTACTTTAGCGA GAGGGGTCAACGCCTGGAATTGATTGTTGTACTACCACAATAAAAAGGCA CACTCAGAGTTTAACAACACCAGAACCATCTCCTTGTTTCGACAGATGTG CGCGTCCATCTGCTCTAAAAAGGGAACGAGTTTCTTCGCGCTCGAGTATG CCTCAGAGTAAGTCAAAAGGGCGTATGGTGTGCCTGTATGCCTATTGAAT CCGATTTAATAACTACTCTTTTGTAGTTGTTGGCACTTTCACTATATACA CTCAATATGGGTATGTCTTGAGTGTGAATACTATGATCCTCGACTACGGT ACAGTTACCTCAGAGCATGTCTGCCAAAATGTCATACGACATGTGTCATT CATTCAAGTCTACACAGTTCGTTCGCTTGACTCTCCACCACCATTTGTCT TGCACTCTTGATTACAGATGTTTCTGTGGAGCTGATGACACAAATCTTAC TGGGACTTCAAAGGCTTGCACTACACCATGTTCCGGTGATGGTTCACAAC TTTGTGGTGGTAACTTCGCCATGAGTATCTATTCCTTTGATTATGTCATC ACTCGAGAGACGGCAGATGTGGAGGGGTCAACATTGGTAGGCTGCCTAAC GGACAATATCGGAGCTAGGAGATTG
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Coding sequence (CDS) from alignment at C-tenellus_contig7456:2072..3146+

>mRNA_C-tenellus_contig7456.1.1 ID=mRNA_C-tenellus_contig7456.1.1|Name=mRNA_C-tenellus_contig7456.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=357bp|location=Sequence derived from alignment at C-tenellus_contig7456:2072..3146+ (Choristocarpus tenellus KU2346)
TACACTTATCAGGGCTGCTTCACAGACGAAGTAGATGACCGAAGGATAAC
TATAGGGTTCGTGGAGAACGAAGCAATGACTATTGAGATGTGCGCGTCCA
TCTGCTCTAAAAAGGGAACGAGTTTCTTCGCGCTCGAGTATGCCTCAGAA
TGTTTCTGTGGAGCTGATGACACAAATCTTACTGGGACTTCAAAGGCTTG
CACTACACCATGTTCCGGTGATGGTTCACAACTTTGTGGTGGTAACTTCG
CCATGAGTATCTATTCCTTTGATTATGTCATCACTCGAGAGACGGCAGAT
GTGGAGGGGTCAACATTGGTAGGCTGCCTAACGGACAATATCGGAGCTAG
GAGATTG
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