mRNA_C-tenellus_contig7422.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7422.2.1
Unique NamemRNA_C-tenellus_contig7422.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7422.2.1 vs. uniprot
Match: A0A6A3C690_HIBSY (Protein STRUBBELIG-RECEPTOR FAMILY 8 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C690_HIBSY)

HSP 1 Score: 193 bits (491), Expect = 5.060e-51
Identity = 103/294 (35.03%), Postives = 171/294 (58.16%), Query Frame = 3
Query:  249 RAIYGLKQSAMEWYKELKGTILAEGWSVSDFDACLYVKRSEDGRVAVLFHYMDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDE--AGITLDQHFYAGSIVREGMGSAEVRNP-SSPLNPGMDLRARRTDQEELDQRHK---PYRTILGKLMFLVGMTRPDISNSVWELGRYAASPCDRHWKGLQQFLRYLLGTTKVGIHYPAGGEMDYGGLVGYGDSDWGNDTTSRRSVTRYLILINGAPVAWKSKMHGAVTTSSSEAEWTAMVHGMRHAIFLRGILGELG 1112
            +++YGLKQS  +WYK     ++ + ++ S +D C+Y++  EDG    L  Y+DD+ +      EI ++K  L  ++E +DLG   K++G+ I+RD+    + L Q  Y   +++   G  E+  P S+PL P   L A  + ++++++ +    PY + +G LM+ +  TRPDIS ++  + RY   P   HW+ ++  LRY+L T  VG+ +    + D   +VGY DSD+  D   RRS T Y+     APV+WKS +   VT S++EAE+ A+   ++ AI+L+G+LGELG
Sbjct:  931 KSLYGLKQSPRQWYKRFDKFMIGQKYTRSKYDHCVYLRELEDGSYIYLLLYVDDMLIASRSQTEIAKLKTQLNREFEMKDLGEAKKILGMEISRDKKLGRLCLSQKEYLRKVLKR-FGINEMSKPVSTPLAPHFKLGASMSPKDDVEREYMSKVPYASAVGSLMYAMVCTRPDISQAIGVVSRYMHDPGKEHWQAVKWILRYILNTVDVGLVFQQD-KQDGQCVVGYCDSDYAGDLDKRRSTTGYVFTFAKAPVSWKSTLQSTVTLSTTEAEYMAVTEAVKEAIWLQGLLGELG 1222          
BLAST of mRNA_C-tenellus_contig7422.2.1 vs. uniprot
Match: A0A6A2WPM4_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WPM4_HIBSY)

HSP 1 Score: 191 bits (484), Expect = 4.000e-50
Identity = 102/294 (34.69%), Postives = 169/294 (57.48%), Query Frame = 3
Query:  249 RAIYGLKQSAMEWYKELKGTILAEGWSVSDFDACLYVKRSEDGRVAVLFHYMDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDE--AGITLDQHFYAGSIVREGMGSAEVRNP-SSPLNPGMDLRARRTDQEELDQRHK---PYRTILGKLMFLVGMTRPDISNSVWELGRYAASPCDRHWKGLQQFLRYLLGTTKVGIHYPAGGEMDYGGLVGYGDSDWGNDTTSRRSVTRYLILINGAPVAWKSKMHGAVTTSSSEAEWTAMVHGMRHAIFLRGILGELG 1112
            +++YGLKQS  +WYK     ++ + ++ S +D C+Y++  EDG    L  Y+DD+ +      EI ++K  L  ++E +DLG   K++G+ I+RD+    + L Q  Y   +++   G  E+  P S+PL P   L A  + +++ ++ +    PY + +G LM+ +  TRPDIS ++  + RY   P   HW+ ++  LRY+L T  VG+ +    + D   +VGY DSD+  D   RRS T Y+     APV+WKS +   V  S++EAE+ A+   ++ AI+L+G+LGELG
Sbjct:  895 KSLYGLKQSPRQWYKRFDKFMIGQKYTRSKYDHCVYLRELEDGSYIYLLLYVDDMLIASRSQTEIAKLKTQLNREFEMKDLGEAKKILGMEISRDKKLGRLCLSQKEYLRKVLKR-FGINEMSKPVSTPLAPHFKLGASMSPKDDAEREYMSKVPYASAVGSLMYAMVCTRPDISQAIGVVSRYMHDPGKEHWQAVKWILRYILNTVDVGLVFQQD-KQDGQCVVGYCDSDYAGDLDKRRSTTGYVFTFAKAPVSWKSTLQSTVALSTTEAEYMAVTEAVKEAIWLQGLLGELG 1186          
BLAST of mRNA_C-tenellus_contig7422.2.1 vs. uniprot
Match: A0A151RYL1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RYL1_CAJCA)

HSP 1 Score: 188 bits (477), Expect = 2.870e-49
Identity = 101/293 (34.47%), Postives = 168/293 (57.34%), Query Frame = 3
Query:  249 RAIYGLKQSAMEWYKELKGTILAEGWSVSDFDACLYVKRSEDGRVAVLFHYMDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDE--AGITLDQHFYAGSIVREGMGSAEVRNPSSPLNPGMDLRARRTDQEELDQRHK---PYRTILGKLMFLVGMTRPDISNSVWELGRYAASPCDRHWKGLQQFLRYLLGTTKVGIHYPAGGEMDYGGLVGYGDSDWGNDTTSRRSVTRYLILINGAPVAWKSKMHGAVTTSSSEAEWTAMVHGMRHAIFLRGILGELG 1112
            +++YGLKQS  +WYK     +L + ++ S +D C+Y+++  DG    L  Y+DD+ +     EEI ++K  L  ++E +DLG   K++G+ I+RD     + L Q  Y   +++    S E +  S+PL     L A  + ++  ++ +    PY + +G LM+ +  TRPDIS +V  + RY  +P   HW+ ++  LRY+L T  VG+ +    E D   +VGY DS++  D  +RRS T Y+  +  APV W+S +   V  S++EAE+ A+   ++ AI+L+G+LGELG
Sbjct:  727 KSLYGLKQSPRQWYKRFDKFMLRQKYTRSKYDHCVYLRKLHDGSFIYLLLYVDDMLIASKNKEEIEKLKTQLNGEFEMKDLGEAKKILGMEISRDRKLGRLCLTQKEYLKRVLKRFGISDESKPVSTPLASHFKLSANLSPRDAAEKAYMSKVPYASAVGSLMYAMVCTRPDISYAVGVVSRYMHNPGKEHWQAVKWILRYILNTVDVGLVFQQ--EQDGQNVVGYCDSNYAGDLDNRRSTTGYVFTLAKAPVCWRSTLQSTVALSTTEAEYMALTEAVKEAIWLQGLLGELG 1017          
BLAST of mRNA_C-tenellus_contig7422.2.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 181 bits (460), Expect = 3.500e-49
Identity = 108/306 (35.29%), Postives = 172/306 (56.21%), Query Frame = 3
Query:  210 GYNCPNGSIVIAARAIYGLKQSAMEWYKELKGTILAEGWSVSDFDACLYVKRSEDGRVAVLFHYMDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAG--ITLDQHFYA-GSIVREGMGSAEVRNPSSPLNPGMDLRARRTDQEELDQRHKPYRTILGKLMFLVGMTRPDISNSVWELGRYAASPCDRHWKGLQQFLRYLLGTTKVGIHYPAGGEMDYGGLV--GYGDSDWGNDTTSRRSVTRYLILINGAPVAWKSKMHGAVTTSSSEAEWTAMVHGMRHAIFLRGILGELG 1112
            GY+  +G +    + +YGLKQS  EW  E    + + G+S  + D C+Y KR  +GR+ ++  ++DD+ +     E++   K  L   ++ +DLG P K++G+ I RD     I+L Q  Y  G + R GM +A  R  S+ L+P + L+ R  D          Y++++G L++    TRPDIS++V ELG++A++P   HW  L++  RYL GT  + + + A  E   G ++  GY D+ + ++   R+S++ Y  LI GA  AW SK    V  SS+EAE+TA+ H  R AI+ R +L ELG
Sbjct:  104 GYDDGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVY-KRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNA--RPVSTLLDPNVILKKRTDDLIADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEE---GEIISTGYSDASFASNPDDRKSISGYTYLIGGASFAWSSKKQSTVALSSTEAEYTALTHATRQAIWNRNLLSELG 403          
BLAST of mRNA_C-tenellus_contig7422.2.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 187 bits (476), Expect = 4.750e-49
Identity = 109/306 (35.62%), Postives = 174/306 (56.86%), Query Frame = 3
Query:  210 GYNCPNGSIVIAARAIYGLKQSAMEWYKELKGTILAEGWSVSDFDACLYVKRSEDGRVAVLFHYMDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAG--ITLDQHFYA-GSIVREGMGSAEVRNPSSPLNPGMDLRARRTDQEELDQRHKPYRTILGKLMFLVGMTRPDISNSVWELGRYAASPCDRHWKGLQQFLRYLLGTTKVGIHYPAGGEMDYGGLV--GYGDSDWGNDTTSRRSVTRYLILINGAPVAWKSKMHGAVTTSSSEAEWTAMVHGMRHAIFLRGILGELG 1112
            GY+  +G +    + +YGLKQS  EW +E    + + G+S  + D C+Y KR  +GR+ ++  ++DD+ +     E++   K  L   ++ +DLG P K++G+ I RD     I+L Q  Y  G + R GM +A  R  S+PL+P + L+ R  D          Y++++G L++    TRPDIS++V ELG++A++P   HW  L++  RYL GT  + + + A  E   G ++  GY D+ + ++   R+S++ Y  LI GA  AW SK    V  SS+EAE+TA+ H  R AI+ R +L ELG
Sbjct: 1011 GYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVY-KRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNA--RPVSTPLDPNVILKKRTDDLVADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEE---GEIISTGYSDASFASNPDDRKSISGYTYLIGGASFAWSSKKQSTVALSSTEAEYTALAHATRQAIWNRNLLSELG 1310          
BLAST of mRNA_C-tenellus_contig7422.2.1 vs. uniprot
Match: A0A6A3BD99_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BD99_HIBSY)

HSP 1 Score: 187 bits (474), Expect = 9.760e-49
Identity = 99/294 (33.67%), Postives = 169/294 (57.48%), Query Frame = 3
Query:  249 RAIYGLKQSAMEWYKELKGTILAEGWSVSDFDACLYVKRSEDGRVAVLFHYMDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDE--AGITLDQHFYAGSIVREGMGSAEVRNP-SSPLNPGMDLRARRTDQEELDQRHK---PYRTILGKLMFLVGMTRPDISNSVWELGRYAASPCDRHWKGLQQFLRYLLGTTKVGIHYPAGGEMDYGGLVGYGDSDWGNDTTSRRSVTRYLILINGAPVAWKSKMHGAVTTSSSEAEWTAMVHGMRHAIFLRGILGELG 1112
            +++YGLKQS  +WYK     ++ + ++ S +D C+Y++  EDG    L  Y+DD+ +      EI ++K  L  ++E +DLG   K++G+ I+RD+    + L Q  Y   +++   G  E+  P S+PL P   L A  + +++ ++ +    PY + +G LM+ +  TRPDIS ++  + RY   P   HW+ ++  +RY+L T  VG+ +    + D   +VGY DSD+  D   RRS T Y+     APV+WKS +   V  S++EA++ A+   ++ AI+++G+LGELG
Sbjct: 1879 KSLYGLKQSPRQWYKRFDKFMIGQKYTRSKYDHCVYLRELEDGSYIYLLLYVDDMLIASRSQTEIAKLKTQLNREFEMKDLGEAKKILGMEISRDKKLGRLCLSQKEYLRKVLKR-FGINEMSKPVSTPLAPHFKLGASMSPKDDAEREYMSKVPYASDVGSLMYAMVCTRPDISQAIGVVSRYMHDPGKEHWQAVKWIMRYILNTVDVGLVFQQD-KQDGQCVVGYCDSDYAGDLDKRRSTTGYVFTFAKAPVSWKSTLQSTVALSTTEAKYMAVTEAVKEAIWIQGLLGELG 2170          
BLAST of mRNA_C-tenellus_contig7422.2.1 vs. uniprot
Match: A0A4Y1REK0_PRUDU (Transposable element protein n=2 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1REK0_PRUDU)

HSP 1 Score: 183 bits (464), Expect = 1.050e-48
Identity = 106/297 (35.69%), Postives = 167/297 (56.23%), Query Frame = 3
Query:  249 RAIYGLKQSAMEWYKELKGTILAEGWSVSDFDACLYVKRSEDGRVAVLFHYMDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAG--ITLDQHFYAGSIVREGMGSAEVRNP-SSPLNPGMDLRAR---RTDQEELDQRHKPYRTILGKLMFLVGMTRPDISNSVWELGRYAASPCDRHWKGLQQFLRYLLGTTKVGI---HYPAGGEMDYGGLVGYGDSDWGNDTTSRRSVTRYLILINGAPVAWKSKMHGAVTTSSSEAEWTAMVHGMRHAIFLRGILGELG 1112
            +++YGLKQS  +WYK     ++ + ++ S +D C+Y ++ +DG    L  Y+DD+ +      EI R+K  L  ++E +DLG   K++G+ I RD A   I+L Q  Y   +++   G  E   P S+PL P   L A    +T +E       PY + +G LM+ +  TRPDIS +V  + RY  +P   HW+ ++  LRY+LGT  VG+   H    G+     +VGY DSD+  D   RRS T ++  I G PV+W+S +   V  S++EAE+ A+   ++ AI+L+G+L +LG
Sbjct:  248 KSLYGLKQSPRQWYKRFDRFMIGQKYTRSHYDHCVYFRKLQDGTFIYLLLYVDDMLIACKSKVEIERLKTQLSNEFEMKDLGEARKILGMEIERDRAKGKISLCQKQYLKKVLQR-FGMNENSKPVSTPLAPHFKLSASMSPKTGEESHYMAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLLFQHDKVTGQC----VVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWLQGLLDDLG 539          
BLAST of mRNA_C-tenellus_contig7422.2.1 vs. uniprot
Match: A0A8J4GXS9_9CHLO (Integrase catalytic domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GXS9_9CHLO)

HSP 1 Score: 186 bits (471), Expect = 1.570e-48
Identity = 103/292 (35.27%), Postives = 164/292 (56.16%), Query Frame = 3
Query:  249 RAIYGLKQSAMEWYKELKGTILAEGWSVSDFDACLYVKRSEDGRVAVLFHYMDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLDQHFYAGSIVREGMGSAEVRNPSSPLNPGM-DLRARR---TDQEELDQRHKPYRTILGKLMFLVGMTRPDISNSVWELGRYAASPCDRHWKGLQQFLRYLLGTTKVGIHYPAGGEMDYGGLVGYGDSDWGNDTTSRRSVTRYLILINGAPVAWKSKMHGAVTTSSSEAEWTAMVHGMRHAIFLRGILGELG 1112
            +A+YGLKQ+   W+++L+ T+ A G+ +S+ D  L++KR     V VL H +DD+ +  N    +  +K  L   ++ RDLG     +G+ I R+   + + Q  YA  +V E  G A+ +  + P+ P +  L A+     +QE  +   K YR ++G LM+L  +TRPDI+ +V+ L RY + P   HW+  +  LRY+ GT   GI Y    +     L GY D+DW ND  +RRS T Y+ ++NG  V+WKS++   V  SS EAE+ +     R A++LR ++G+ G
Sbjct:  597 KALYGLKQAGRAWHRKLEATLAANGFEISESDPSLFIKRVGSRVVRVLTH-VDDLLIASNCASLMAEVKQYLAKSFDIRDLGAVSVFLGMEIMRNGGELKISQRRYAFDLV-ERFGLADAQPEAVPMKPNLVQLTAQGIGVVEQEPFEDATK-YRALVGGLMYLAVVTRPDIAQAVYRLARYMSKPVPAHWEAAKAVLRYVKGTATYGIVYSRSEQ-----LFGYADADWANDRDNRRSTTGYVFMMNGGAVSWKSRLQPTVAASSVEAEYMSASFATREAMWLRKLMGDFG 880          
BLAST of mRNA_C-tenellus_contig7422.2.1 vs. uniprot
Match: A0A4Y1QLF3_PRUDU (Integrase catalytic domain-containing protein n=2 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QLF3_PRUDU)

HSP 1 Score: 186 bits (471), Expect = 1.820e-48
Identity = 107/297 (36.03%), Postives = 168/297 (56.57%), Query Frame = 3
Query:  249 RAIYGLKQSAMEWYKELKGTILAEGWSVSDFDACLYVKRSEDGRVAVLFHYMDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAG--ITLDQHFYAGSIVREGMGSAEVRNP-SSPLNPGMDLRAR---RTDQEELDQRHKPYRTILGKLMFLVGMTRPDISNSVWELGRYAASPCDRHWKGLQQFLRYLLGTTKVGI---HYPAGGEMDYGGLVGYGDSDWGNDTTSRRSVTRYLILINGAPVAWKSKMHGAVTTSSSEAEWTAMVHGMRHAIFLRGILGELG 1112
            +++YGLKQS  +WYK     ++ + ++ S +D C+Y ++ +DG    L  Y+DD+ +      EI R+K  L  ++E +DLG   K++G+ I RD A   I+L Q  Y   +++   G  E   P S+PL P   L A    +T +E       PY + +G LM+ +  TRPDIS +V  + RY  +P   HW+ ++  LRY+LGT  VG+   H    G+     +VGY DSD+  D   RRS T ++  I G PV+W+S +   V  S++EAE+ A+   ++ AI+L+G+LG+LG
Sbjct:  656 KSLYGLKQSPRQWYKRFDRFMIGQKYTRSHYDHCVYFRKLQDGTFIYLLLYVDDMLIACKSKVEIERLKTQLSNEFEMKDLGEARKILGMEIERDRAKGKISLCQKQYLKKVLQR-FGMNENSKPVSTPLAPHFKLSASMSPKTGEESHYMAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLLFQHDKVTGQC----VVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWLQGLLGDLG 947          
BLAST of mRNA_C-tenellus_contig7422.2.1 vs. uniprot
Match: A0A5H2Y0G7_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2Y0G7_PRUDU)

HSP 1 Score: 186 bits (471), Expect = 2.160e-48
Identity = 107/297 (36.03%), Postives = 168/297 (56.57%), Query Frame = 3
Query:  249 RAIYGLKQSAMEWYKELKGTILAEGWSVSDFDACLYVKRSEDGRVAVLFHYMDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAG--ITLDQHFYAGSIVREGMGSAEVRNP-SSPLNPGMDLRAR---RTDQEELDQRHKPYRTILGKLMFLVGMTRPDISNSVWELGRYAASPCDRHWKGLQQFLRYLLGTTKVGI---HYPAGGEMDYGGLVGYGDSDWGNDTTSRRSVTRYLILINGAPVAWKSKMHGAVTTSSSEAEWTAMVHGMRHAIFLRGILGELG 1112
            +++YGLKQS  +WYK     ++ + ++ S +D C+Y ++ +DG    L  Y+DD+ +      EI R+K  L  ++E +DLG   K++G+ I RD A   I+L Q  Y   +++   G  E   P S+PL P   L A    +T +E       PY + +G LM+ +  TRPDIS +V  + RY  +P   HW+ ++  LRY+LGT  VG+   H    G+     +VGY DSD+  D   RRS T ++  I G PV+W+S +   V  S++EAE+ A+   ++ AI+L+G+LG+LG
Sbjct:  960 KSLYGLKQSPRQWYKRFDRFMIGQKYTRSHYDHCVYFRKLQDGTFIYLLLYVDDMLIACKSKVEIERLKTQLSNEFEMKDLGEARKILGMEIERDRAKGKISLCQKQYLKKVLQR-FGMNENSKPVSTPLAPHFKLSASMSPKTGEESHYMAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVGLLFQHDKVTGQC----VVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWLQGLLGDLG 1251          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7422.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3C690_HIBSY5.060e-5135.03Protein STRUBBELIG-RECEPTOR FAMILY 8 n=1 Tax=Hibis... [more]
A0A6A2WPM4_HIBSY4.000e-5034.69Integrase catalytic domain-containing protein n=1 ... [more]
A0A151RYL1_CAJCA2.870e-4934.47Retrovirus-related Pol polyprotein from transposon... [more]
A0A284R853_ARMOS3.500e-4935.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284QR88_ARMOS4.750e-4935.62Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A6A3BD99_HIBSY9.760e-4933.67Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A4Y1REK0_PRUDU1.050e-4835.69Transposable element protein n=2 Tax=Prunus dulcis... [more]
A0A8J4GXS9_9CHLO1.570e-4835.27Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y1QLF3_PRUDU1.820e-4836.03Integrase catalytic domain-containing protein n=2 ... [more]
A0A5H2Y0G7_PRUDU2.160e-4836.03Transposable element protein n=1 Tax=Prunus dulcis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7422contigC-tenellus_contig7422:2674..3785 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4096.XP_009787759.1
PFAMsRVT_2,Retrotran_gag_2,Retrotran_gag_3,Retrotrans_gag,gag_pre-integrs,rve,zf-CCHC
Model size1112
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.68e-47
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,37THH@33090|Viridiplantae,3GG2K@35493|Streptophyta,44UC5@71274|asterids
DescriptionMitochondrial protein
Cds size915
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790035.510749-CDS-C-tenellus_contig7422:2673..35881680790035.510749-CDS-C-tenellus_contig7422:2673..3588Choristocarpus tenellus KU2346CDSC-tenellus_contig7422 2674..3588 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790035.5239265-UTR-C-tenellus_contig7422:3588..37851680790035.5239265-UTR-C-tenellus_contig7422:3588..3785Choristocarpus tenellus KU2346UTRC-tenellus_contig7422 3589..3785 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7422.2.1prot_C-tenellus_contig7422.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7422 2674..3588 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7422.2.1

>prot_C-tenellus_contig7422.2.1 ID=prot_C-tenellus_contig7422.2.1|Name=mRNA_C-tenellus_contig7422.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=305bp
MKMYGYNCPNGSIVIAARAIYGLKQSAMEWYKELKGTILAEGWSVSDFDA
CLYVKRSEDGRVAVLFHYMDDITLTGNYHEEITRMKNNLLTKYEGRDLGT
PDKLVGVAITRDEAGITLDQHFYAGSIVREGMGSAEVRNPSSPLNPGMDL
RARRTDQEELDQRHKPYRTILGKLMFLVGMTRPDISNSVWELGRYAASPC
DRHWKGLQQFLRYLLGTTKVGIHYPAGGEMDYGGLVGYGDSDWGNDTTSR
RSVTRYLILINGAPVAWKSKMHGAVTTSSSEAEWTAMVHGMRHAIFLRGI
LGELG
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mRNA from alignment at C-tenellus_contig7422:2674..3785-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7422.2.1 ID=mRNA_C-tenellus_contig7422.2.1|Name=mRNA_C-tenellus_contig7422.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1112bp|location=Sequence derived from alignment at C-tenellus_contig7422:2674..3785- (Choristocarpus tenellus KU2346)
ACATGGAGACATCGAAAGATGCAAGGCCAGGCTGGTGACACGGGGGTTTT CCCAACAAGAAGGGGTGGACCACTTCAGCACGTTTAGTCCAGTGGTGGGA TTTGACGTGATTCGAGCAGTCCTGGCTACAGCAGCTAACAGAAACTGGAT CATCAACTCCCTAGACTTCACTCAAACCTACCTGAACGCACCACTTCATG AAGATGTATGGCTACAACTGCCCAAATGGATCCATCGTAATAGCTGCCAG GGCCATCTATGGCCTTAAGCAATCAGCAATGGAGTGGTACAAGGAGCTAA AGGGAACAATTTTAGCTGAGGGGTGGAGTGTTAGCGACTTTGATGCCTGC TTGTATGTCAAAAGGAGTGAAGATGGAAGGGTTGCTGTTCTTTTTCACTA CATGGATGACATCACATTGACTGGAAACTACCACGAAGAAATAACAAGGA TGAAGAACAATCTGCTTACCAAGTACGAAGGACGGGACCTCGGGACCCCA GACAAGTTAGTCGGGGTGGCAATCACCAGGGATGAGGCTGGCATCACACT AGACCAGCATTTCTATGCAGGGAGCATTGTTCGAGAAGGAATGGGATCTG CAGAAGTACGGAATCCCTCATCCCCTCTAAACCCAGGAATGGACCTGAGG GCAAGAAGAACTGACCAGGAGGAGCTGGACCAGAGGCACAAACCCTACCG CACCATCCTGGGGAAACTTATGTTCCTAGTCGGGATGACACGACCAGACA TATCCAACAGTGTGTGGGAACTGGGAAGATATGCAGCATCTCCATGTGAT CGACACTGGAAAGGGCTGCAACAATTTCTACGATACCTATTGGGCACCAC GAAAGTAGGGATACACTATCCTGCTGGTGGTGAAATGGACTATGGGGGCC TGGTCGGGTATGGAGACTCAGACTGGGGCAATGACACTACATCAAGGCGG AGCGTGACCAGGTATCTAATACTCATCAATGGAGCACCTGTTGCATGGAA ATCCAAGATGCACGGAGCTGTAACCACATCTTCATCAGAGGCGGAATGGA CAGCGATGGTGCATGGAATGAGACATGCAATATTCCTCAGAGGCATCCTG GGGGAGCTGGGC
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Coding sequence (CDS) from alignment at C-tenellus_contig7422:2674..3785-

>mRNA_C-tenellus_contig7422.2.1 ID=mRNA_C-tenellus_contig7422.2.1|Name=mRNA_C-tenellus_contig7422.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=915bp|location=Sequence derived from alignment at C-tenellus_contig7422:2674..3785- (Choristocarpus tenellus KU2346)
ATGAAGATGTATGGCTACAACTGCCCAAATGGATCCATCGTAATAGCTGC
CAGGGCCATCTATGGCCTTAAGCAATCAGCAATGGAGTGGTACAAGGAGC
TAAAGGGAACAATTTTAGCTGAGGGGTGGAGTGTTAGCGACTTTGATGCC
TGCTTGTATGTCAAAAGGAGTGAAGATGGAAGGGTTGCTGTTCTTTTTCA
CTACATGGATGACATCACATTGACTGGAAACTACCACGAAGAAATAACAA
GGATGAAGAACAATCTGCTTACCAAGTACGAAGGACGGGACCTCGGGACC
CCAGACAAGTTAGTCGGGGTGGCAATCACCAGGGATGAGGCTGGCATCAC
ACTAGACCAGCATTTCTATGCAGGGAGCATTGTTCGAGAAGGAATGGGAT
CTGCAGAAGTACGGAATCCCTCATCCCCTCTAAACCCAGGAATGGACCTG
AGGGCAAGAAGAACTGACCAGGAGGAGCTGGACCAGAGGCACAAACCCTA
CCGCACCATCCTGGGGAAACTTATGTTCCTAGTCGGGATGACACGACCAG
ACATATCCAACAGTGTGTGGGAACTGGGAAGATATGCAGCATCTCCATGT
GATCGACACTGGAAAGGGCTGCAACAATTTCTACGATACCTATTGGGCAC
CACGAAAGTAGGGATACACTATCCTGCTGGTGGTGAAATGGACTATGGGG
GCCTGGTCGGGTATGGAGACTCAGACTGGGGCAATGACACTACATCAAGG
CGGAGCGTGACCAGGTATCTAATACTCATCAATGGAGCACCTGTTGCATG
GAAATCCAAGATGCACGGAGCTGTAACCACATCTTCATCAGAGGCGGAAT
GGACAGCGATGGTGCATGGAATGAGACATGCAATATTCCTCAGAGGCATC
CTGGGGGAGCTGGGC
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