mRNA_C-tenellus_contig7400.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7400.1.1
Unique NamemRNA_C-tenellus_contig7400.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7400.1.1 vs. uniprot
Match: D7FS56_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS56_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 1.950e-64
Identity = 158/399 (39.60%), Postives = 212/399 (53.13%), Query Frame = 1
Query:  157 DITALCKEAAAELGPDEMIHGSHFSLFDAMSALELMDPKMDKPLPALQSLESRIEDGVLPRKLENFSHRLKPSTPPVI------------SSSATDEALLGNET---------ISPAEVLLGVLDGMVVCEIAWHEGGTLPETLYTCLYLHPLAYSALMDELGLGPLPQV-----GFPKLDLQIDSGNCGNRNTENQGSGSPNDGSGVSSHWS--DKALTLALLAHSLGTLRCCSMARDIILLADIYDEEDFNANTYGFRLVPQVEDGAILALLALAERAVGQRVQLSSNAQPRSKDKEVGSNEGRGSGNSSASLGIENDHRGEGGGEWGPSGAKVGQRILAHLKGRRLFLEALLALKEAFSNKEHKRRMQLLSLLRSQKAS---VGGGRVDETKTEAV 1260
            D+T LC+ AA+ LGPDEMIH + FSL+ AMSALELMD KMDKP P L+SL+ RI  G LP  L+     L P+ P               ++S++     G +T           P++  L VLDGM VCE+AWHEGG+LPETLY CLYLHP  +SA++  LG  PL Q         +LDL+I  GN                       W   D+ALTLA+LA SL TLRCCS+ARD+++LADI++EEDF  +T+GFRL P VED ++  LLALAE A+  R++ +   +                               + GG  G       + ILAHL+ R   L A LAL++AF+NK+  +R++ L   R+++ +    G G      TE  
Sbjct:   29 DVTQLCRTAASMLGPDEMIHDADFSLYGAMSALELMDTKMDKPPPVLESLDQRIASGALPTNLDGSVPPL-PAPPQXXXXXXXXXXXHEEAASSSPSPATGFQTPGVPPHPSSFGPSQRTLSVLDGMSVCEVAWHEGGSLPETLYACLYLHPDVFSAVLRGLGW-PLEQAPGSSSARTRLDLRIKEGNF---------------------PWKPVDRALTLAVLAQSLATLRCCSLARDVMILADIFEEEDFYPSTFGFRLAPPVEDESLTDLLALAEAAMRARIKCTEPLR-------------------------------QTGGAGGGDSRSPDECILAHLESRTQLLRACLALRDAFTNKQRLKRLKALEKRRAEELAQKTAGAGDAGTPTTEGA 373          
BLAST of mRNA_C-tenellus_contig7400.1.1 vs. uniprot
Match: A0A836CGZ5_9STRA (Mak10 subunit, NatC N-terminal acetyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGZ5_9STRA)

HSP 1 Score: 166 bits (419), Expect = 2.790e-40
Identity = 101/261 (38.70%), Postives = 138/261 (52.87%), Query Frame = 1
Query:  151 WQDITALCKEAAAELGPDEMIHGSHFSLFDAMSALELMDPKMDKPLPALQSLESRIEDGVLPRKLENFSHRLKPSTPPVISSSATDEALLGNETISPAEVLLGVLDGMVVCEIAWHEGGTLPETLYTCLYLHPLAYSALMDELGLGPLPQVGFPKLDLQIDSGNCGNRNTENQGSGSPNDGSGVSS-----------HWSDKALTLALLAHSLGTLRCCSMARDIILLADIYDEEDFNANTYGFRLVPQ--VEDGAILALL 894
            W DI  LC+ AA +    E++H +HF ++DAMSALELM+PKMD+ +   Q+++  +E G LP                               T +   V+  VLDG++ CE+AWH+GG+LPETLYTCLY+HP A  ALM  L L        P+              T   GS S N  +G+S            H   K L+LAL A+    LRCC +ARDI+LLADI++EEDF   ++GF+LVP   + D A++ LL
Sbjct:    5 WTDIGDLCQSAADDFAIGELLHDAHFDVYDAMSALELMEPKMDQAVVVHQTVDKLLEIGELP------------------------------VTFADPGVVCDVLDGLLTCELAWHDGGSLPETLYTCLYVHPSALEALMRVLQL----DKAAPEA-------------TRENGSSSANSSTGISDVQQSATILDERHVVGKELSLALFAYVAACLRCCGIARDIVLLADIHEEEDFYTKSFGFQLVPPTGISDKALVVLL 218          
BLAST of mRNA_C-tenellus_contig7400.1.1 vs. uniprot
Match: W7U6I3_9STRA (Mak10 subunit, NatC N(Alpha)-terminal acetyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6I3_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.340e-20
Identity = 90/270 (33.33%), Postives = 131/270 (48.52%), Query Frame = 1
Query:  151 WQDITALCKEAAAELGPDEMIHGSHFSLFDAMSALELMDPKMDKPL-PALQSLESRIEDGVLPRKLENFSHRLKPSTPPVISSSATDEALLGNETISPAEVLLGVLDGMVVCEIAWHEGGTLPETLYTCLYLHPLAYSALMDELGLGPLPQVGFPKLDLQIDSGNCG-NRNTENQGSGSPNDGSGVSSHWSDKALT--LALLAHSLGTLRCCSMARDIILLADIYDEEDFNANTYGFRLVPQVEDGAILALLALAERAVGQRVQLSSNAQ 948
            W DIT+ C+ AAA L   EMI    FSLF+AMSALELMDPKMD+ L   ++S++SR+  G LP ++              ++ +A                   V++ M+  E+AW++G +L ++L+ CLY H  +  AL            G  +     +SG  G  R +   G+  P     ++S   D A T  L LLA   GTL+  +  R +IL ADIY+EED   N+ G  L   +E     A+  L E   G R+Q   ++Q
Sbjct:   22 WTDITSDCRLAAASLDTGEMICSPAFSLFEAMSALELMDPKMDESLLEPVESVQSRLARGALPVQVS-------------VAQAAR------------------VVENMLAFEVAWYQGASLLDSLFLCLYPHGASIHALCS--------LCGVTRTSEPHESGAEGMRRKSGGGGAAGPIVRDAITS---DPACTPALTLLAVVFGTLKTVAGFRKVILDADIYEEEDAQPNSLGLYLAENLETDD--AIFLLKEAREGLRLQEGGSSQ 247          
BLAST of mRNA_C-tenellus_contig7400.1.1 vs. uniprot
Match: A0A6F9ADQ8_9TELE (N-alpha-acetyltransferase 35, NatC auxiliary subunit n=1 Tax=Coregonus sp. 'balchen' TaxID=861768 RepID=A0A6F9ADQ8_9TELE)

HSP 1 Score: 103 bits (256), Expect = 1.370e-19
Identity = 81/274 (29.56%), Postives = 119/274 (43.43%), Query Frame = 1
Query:  151 WQDITALCKEAAAELGPDEMIHGSHFSLFDAMSALELMDPKMDKPLPALQSLESRIEDGVLPRKLENFSHRLKPSTPPVISSSATDEALLGNETISPAEVLLGVLDGMVVCEIAWHEGGTLPETLYTCLYLHPLAYSALMDELGLGPLPQVGFPKLDLQIDSGNCGNRNTENQGSGSPNDGSGVSSHWSDKALTLALLAHSLGTLRCCSMARDIILLADIYDEEDFNANTYGFRLVPQVEDGAILALLALAERAVGQRVQLSSNAQPRSKDKEV 972
            W DIT   KEA  EL   E++H   F LF+AMSA+E+MDPKMD  +   Q          + RK+ NF   +K            D A+   +   P   L+G++D    C I W EG +L +T++TCLY+H                        DL                         +  H        AL A +LG L+ C +AR+ +  A +++EEDF A TYGF++   V D  +  +L   E  + +RV+ + + Q   +D EV
Sbjct:   28 WVDITHDFKEACKELNLGELLHDKLFGLFEAMSAIEMMDPKMDAGMIGNQ----------VNRKVLNFEQAVK------------DGAIRVRDLSLPE--LIGIMDNCFCCLITWLEGHSLAQTVFTCLYVH----------------------NPDL-------------------------IEDH--------ALKAFALGILKVCDIAREKVNKAAVFEEEDFQAMTYGFKMANNVTDLRVTGMLKDVEDELQRRVKSTRSRQGEQRDPEV 222          
BLAST of mRNA_C-tenellus_contig7400.1.1 vs. uniprot
Match: A0A6P7XGY5_9AMPH (N-alpha-acetyltransferase 35, NatC auxiliary subunit n=3 Tax=Dipnotetrapodomorpha TaxID=1338369 RepID=A0A6P7XGY5_9AMPH)

HSP 1 Score: 102 bits (255), Expect = 2.070e-19
Identity = 82/279 (29.39%), Postives = 124/279 (44.44%), Query Frame = 1
Query:  151 WQDITALCKEAAAELGPDEMIHGSHFSLFDAMSALELMDPKMDKPLPALQSLESRIEDGVLPRKLENFSHRLKPSTPPVISSSATDEA-LLGNETISPAEV----LLGVLDGMVVCEIAWHEGGTLPETLYTCLYLHPLAYSALMDELGLGPLPQVGFPKLDLQIDSGNCGNRNTENQGSGSPNDGSGVSSHWSDKALTLALLAHSLGTLRCCSMARDIILLADIYDEEDFNANTYGFRLVPQVEDGAILALLALAERAVGQRVQLSSNAQPRSKDKEV 972
            W DIT   KEA  EL   E++H   F LF+AMSA+E+MDPKMD  +   Q          + RK+ NF   +K +  P ISS  T +   L + TI   ++    L+G++D    C I W EG +L +T++TCLY+H                        D   D                                   + A +LG L+ C +AR+ +  A +++EEDF + TYGF++   V D  +  +L   E  + +RV+ + + Q   +D EV
Sbjct:   28 WIDITQDFKEACRELNLGELLHDKLFGLFEAMSAIEMMDPKMDAGMIGNQ----------VNRKVLNFEQAIKKN--PYISSERTVKINCLQDATIKIKDLTMPELIGIIDTCFCCLITWLEGHSLAQTVFTCLYVH----------------------NPDFIEDP---------------------------------VMKAFALGILKICDIAREKVNKAAVFEEEDFQSMTYGFKMANSVTDLRVTGMLKDVEDDLQRRVKSTRSRQGEERDPEV 239          
BLAST of mRNA_C-tenellus_contig7400.1.1 vs. uniprot
Match: A7E388_BOVIN (N-alpha-acetyltransferase 35, NatC auxiliary subunit (Fragment) n=2 Tax=Pecora TaxID=35500 RepID=A7E388_BOVIN)

HSP 1 Score: 101 bits (252), Expect = 3.420e-19
Identity = 83/303 (27.39%), Postives = 128/303 (42.24%), Query Frame = 1
Query:   64 MVHPVSIGDQNSESSPTIANSIEEQKCEEWQDITALCKEAAAELGPDEMIHGSHFSLFDAMSALELMDPKMDKPLPALQSLESRIEDGVLPRKLENFSHRLKPSTPPVISSSATDEALLGNETISPAEVLLGVLDGMVVCEIAWHEGGTLPETLYTCLYLHPLAYSALMDELGLGPLPQVGFPKLDLQIDSGNCGNRNTENQGSGSPNDGSGVSSHWSDKALTLALLAHSLGTLRCCSMARDIILLADIYDEEDFNANTYGFRLVPQVEDGAILALLALAERAVGQRVQLSSNAQPRSKDKEV 972
            MV   S+GD +S     I   +E+     W DIT   +EA  EL   E++H   F LF+AMSA+E+MDPKMD  +   Q          + RK+ NF   +K  T  +   +  +              L+G++D    C I W EG +L +T++TCLY+H                        D   D                                  A+ A +LG L+ C +AR+ +  A +++EEDF + TYGF++   V D  +  +L   E  + +RV+ + + Q   +D EV
Sbjct:    1 MVMKASVGDDDSGWELGIPEKMEKSNTN-WVDITQDFEEACRELKLGELLHDKLFGLFEAMSAIEMMDPKMDAGMIGNQ----------VNRKVLNFEQAIKDGTIKIKDLTLPE--------------LIGIMDTCFCCLITWLEGHSLAQTVFTCLYIH----------------------NPDFIEDP---------------------------------AMKAFALGILKICDIAREKVNKAAVFEEEDFQSMTYGFKMANSVTDLRVTGMLKDVEDDMQRRVKSTRSRQGEERDPEV 223          
BLAST of mRNA_C-tenellus_contig7400.1.1 vs. uniprot
Match: A0A015IA36_RHIIW (Mak10p n=1 Tax=Rhizophagus irregularis (strain DAOM 197198w) TaxID=1432141 RepID=A0A015IA36_RHIIW)

HSP 1 Score: 101 bits (252), Expect = 4.080e-19
Identity = 73/253 (28.85%), Postives = 113/253 (44.66%), Query Frame = 1
Query:  148 EWQDITALCKEAAAELGPDEMIHGSHFSLFDAMSALELMDPKMDKPLPALQSLESRIEDGVLPRKLENFSHRLKPSTPPVISSSATDEALLGNETISPAEVLLGVLDGMVVCEIAWHEGGTLPETLYTCLYLHPLAYSALMDELGLGPLPQVGFPKLDLQIDSGNCGNRNTENQGSGSPNDGSGVSSHWSDKALTLALLAHSLGTLRCCSMARDIILLADIYDEEDFNANTYGFRLVPQVEDGAILALLALAE 906
            +++DIT    EA  E    +++H   F L+DAMS++E+MDPKMD  +         I D  L +   N   RLKP                          +LG++D +  CE+ WH G +L +TL+TC+Y H ++      EL          P+L +                  SPND S   S    + + L L ++ LGT++CC +  D +   ++Y+EEDF+ N YG  +     D   + L+  AE
Sbjct:   44 QYKDITKFLDEATDEFEIGQLVHLESFGLYDAMSSIEIMDPKMDSGM---------ILDSDLNKPPFNLRARLKPKE------------------------VLGIIDHLFNCEMTWHSGHSLSQTLFTCMYFHHVS------ELN---------PELFIN-----------------SPNDDS-TDSDSPIEFVILVLKSYVLGTIKCCHLVWDEMTKGNVYEEEDFSTNKYGISMYENFPDSQCIKLIEDAE 230          
BLAST of mRNA_C-tenellus_contig7400.1.1 vs. uniprot
Match: A0A015K3R7_RHIIW (Mak10p n=14 Tax=Rhizophagus TaxID=1129544 RepID=A0A015K3R7_RHIIW)

HSP 1 Score: 101 bits (252), Expect = 5.330e-19
Identity = 73/253 (28.85%), Postives = 113/253 (44.66%), Query Frame = 1
Query:  148 EWQDITALCKEAAAELGPDEMIHGSHFSLFDAMSALELMDPKMDKPLPALQSLESRIEDGVLPRKLENFSHRLKPSTPPVISSSATDEALLGNETISPAEVLLGVLDGMVVCEIAWHEGGTLPETLYTCLYLHPLAYSALMDELGLGPLPQVGFPKLDLQIDSGNCGNRNTENQGSGSPNDGSGVSSHWSDKALTLALLAHSLGTLRCCSMARDIILLADIYDEEDFNANTYGFRLVPQVEDGAILALLALAE 906
            +++DIT    EA  E    +++H   F L+DAMS++E+MDPKMD  +         I D  L +   N   RLKP                          +LG++D +  CE+ WH G +L +TL+TC+Y H ++      EL          P+L +                  SPND S   S    + + L L ++ LGT++CC +  D +   ++Y+EEDF+ N YG  +     D   + L+  AE
Sbjct:   44 QYKDITKFLDEATDEFEIGQLVHLESFGLYDAMSSIEIMDPKMDSGM---------ILDSDLNKPPFNLRARLKPKE------------------------VLGIIDHLFNCEMTWHSGHSLSQTLFTCMYFHHVS------ELN---------PELFIN-----------------SPNDDS-TDSDSPIEFVILVLKSYVLGTIKCCHLVWDEMTKGNVYEEEDFSTNKYGISMYENFPDSQCIKLIEDAE 230          
BLAST of mRNA_C-tenellus_contig7400.1.1 vs. uniprot
Match: A0A834B3R9_9CHIR (N-alpha-acetyltransferase 35, NatC auxiliary subunit n=1 Tax=Phyllostomus discolor TaxID=89673 RepID=A0A834B3R9_9CHIR)

HSP 1 Score: 99.8 bits (247), Expect = 6.700e-19
Identity = 82/303 (27.06%), Postives = 128/303 (42.24%), Query Frame = 1
Query:   64 MVHPVSIGDQNSESSPTIANSIEEQKCEEWQDITALCKEAAAELGPDEMIHGSHFSLFDAMSALELMDPKMDKPLPALQSLESRIEDGVLPRKLENFSHRLKPSTPPVISSSATDEALLGNETISPAEVLLGVLDGMVVCEIAWHEGGTLPETLYTCLYLHPLAYSALMDELGLGPLPQVGFPKLDLQIDSGNCGNRNTENQGSGSPNDGSGVSSHWSDKALTLALLAHSLGTLRCCSMARDIILLADIYDEEDFNANTYGFRLVPQVEDGAILALLALAERAVGQRVQLSSNAQPRSKDKEV 972
            MV   S+ D +S    +I   +E+     W DIT   +EA  EL   E++H   F LF+AMSA+E+MDPKMD  +   Q          + RK+ NF   +K  T  +   +  +              L+G++D    C I W EG +L +T++TCLY+H                        D   D                                  A+ A +LG L+ C +AR+ +  A +++EEDF + TYGF++   V D  +  +L   E  + +RV+ + + Q   +D EV
Sbjct:    1 MVMKASVEDDDSGWELSIPEKMEKSNTN-WVDITQDFEEACRELKLGELLHDKLFGLFEAMSAIEMMDPKMDAGMIGNQ----------VNRKVLNFEQAIKDGTIKIKDLTLPE--------------LIGIMDTCFCCLITWLEGHSLAQTVFTCLYIH----------------------NPDFIEDP---------------------------------AMKAFALGILKICDIAREKVNKAAVFEEEDFQSMTYGFKMANSVTDLRVTGMLKDVEDDMQRRVKSTRSRQGEERDPEV 223          
BLAST of mRNA_C-tenellus_contig7400.1.1 vs. uniprot
Match: A0A372QXV5_9GLOM (Uncharacterized protein n=1 Tax=Rhizophagus sp. MUCL 43196 TaxID=1803374 RepID=A0A372QXV5_9GLOM)

HSP 1 Score: 101 bits (252), Expect = 7.450e-19
Identity = 73/253 (28.85%), Postives = 113/253 (44.66%), Query Frame = 1
Query:  148 EWQDITALCKEAAAELGPDEMIHGSHFSLFDAMSALELMDPKMDKPLPALQSLESRIEDGVLPRKLENFSHRLKPSTPPVISSSATDEALLGNETISPAEVLLGVLDGMVVCEIAWHEGGTLPETLYTCLYLHPLAYSALMDELGLGPLPQVGFPKLDLQIDSGNCGNRNTENQGSGSPNDGSGVSSHWSDKALTLALLAHSLGTLRCCSMARDIILLADIYDEEDFNANTYGFRLVPQVEDGAILALLALAE 906
            +++DIT    EA  E    +++H   F L+DAMS++E+MDPKMD  +         I D  L +   N   RLKP                          +LG++D +  CE+ WH G +L +TL+TC+Y H ++      EL          P+L +                  SPND S   S    + + L L ++ LGT++CC +  D +   ++Y+EEDF+ N YG  +     D   + L+  AE
Sbjct:  959 QYKDITKFLDEATDEFEIGQLVHLESFGLYDAMSSIEIMDPKMDSGM---------ILDSDLNKPPFNLRARLKPKE------------------------VLGIIDHLFNCEMTWHSGHSLSQTLFTCMYFHHVS------ELN---------PELFIN-----------------SPNDDS-TDSDSPIEFVILVLKSYVLGTIKCCHLVWDEMTKGNVYEEEDFSTNKYGISMYENFPDSQCIKLIEDAE 1145          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7400.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS56_ECTSI1.950e-6439.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CGZ5_9STRA2.790e-4038.70Mak10 subunit, NatC N-terminal acetyltransferase-d... [more]
W7U6I3_9STRA1.340e-2033.33Mak10 subunit, NatC N(Alpha)-terminal acetyltransf... [more]
A0A6F9ADQ8_9TELE1.370e-1929.56N-alpha-acetyltransferase 35, NatC auxiliary subun... [more]
A0A6P7XGY5_9AMPH2.070e-1929.39N-alpha-acetyltransferase 35, NatC auxiliary subun... [more]
A7E388_BOVIN3.420e-1927.39N-alpha-acetyltransferase 35, NatC auxiliary subun... [more]
A0A015IA36_RHIIW4.080e-1928.85Mak10p n=1 Tax=Rhizophagus irregularis (strain DAO... [more]
A0A015K3R7_RHIIW5.330e-1928.85Mak10p n=14 Tax=Rhizophagus TaxID=1129544 RepID=A0... [more]
A0A834B3R9_9CHIR6.700e-1927.06N-alpha-acetyltransferase 35, NatC auxiliary subun... [more]
A0A372QXV5_9GLOM7.450e-1928.85Uncharacterized protein n=1 Tax=Rhizophagus sp. MU... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7400contigC-tenellus_contig7400:91..4697 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FS56
Preferred nameMAK10
PFAMsMak10
Model size1527
Max annot lvl2759|Eukaryota
KEGG koko:K20823
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006473,GO:0006474,GO:0006807,GO:0006914,GO:0008080,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0010467,GO:0016236,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0017196,GO:0018193,GO:0018206,GO:0019538,GO:0031248,GO:0031365,GO:0031414,GO:0031417,GO:0032991,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051604,GO:0061919,GO:0071704,GO:1901564,GO:1902493,GO:1902494,GO:1990234
Exons4
Evalue3.2e-65
EggNOG OGsKOG2343@1|root,KOG2343@2759|Eukaryota
Ec32 ortholog descriptionNatC N(alpha)-terminal acetyltransferase, Mak10 subunit
Ec32 orthologEc-01_000630.1
Descriptionsmooth muscle cell proliferation
Cds size1527
COG categoryO
BRITEko00000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790034.8268585-CDS-C-tenellus_contig7400:90..6931680790034.8268585-CDS-C-tenellus_contig7400:90..693Choristocarpus tenellus KU2346CDSC-tenellus_contig7400 91..693 -
1680790034.8403099-CDS-C-tenellus_contig7400:3276..35631680790034.8403099-CDS-C-tenellus_contig7400:3276..3563Choristocarpus tenellus KU2346CDSC-tenellus_contig7400 3277..3563 -
1680790034.8515947-CDS-C-tenellus_contig7400:3862..41991680790034.8515947-CDS-C-tenellus_contig7400:3862..4199Choristocarpus tenellus KU2346CDSC-tenellus_contig7400 3863..4199 -
1680790034.860688-CDS-C-tenellus_contig7400:4397..46971680790034.860688-CDS-C-tenellus_contig7400:4397..4697Choristocarpus tenellus KU2346CDSC-tenellus_contig7400 4398..4697 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7400.1.1prot_C-tenellus_contig7400.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7400 91..4697 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7400.1.1

>prot_C-tenellus_contig7400.1.1 ID=prot_C-tenellus_contig7400.1.1|Name=mRNA_C-tenellus_contig7400.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=509bp
VSHCSNRGQGKMDIASRADEDMVHPVSIGDQNSESSPTIANSIEEQKCEE
WQDITALCKEAAAELGPDEMIHGSHFSLFDAMSALELMDPKMDKPLPALQ
SLESRIEDGVLPRKLENFSHRLKPSTPPVISSSATDEALLGNETISPAEV
LLGVLDGMVVCEIAWHEGGTLPETLYTCLYLHPLAYSALMDELGLGPLPQ
VGFPKLDLQIDSGNCGNRNTENQGSGSPNDGSGVSSHWSDKALTLALLAH
SLGTLRCCSMARDIILLADIYDEEDFNANTYGFRLVPQVEDGAILALLAL
AERAVGQRVQLSSNAQPRSKDKEVGSNEGRGSGNSSASLGIENDHRGEGG
GEWGPSGAKVGQRILAHLKGRRLFLEALLALKEAFSNKEHKRRMQLLSLL
RSQKASVGGGRVDETKTEAVRPAGGGGGNRGGGCKTTDQKGAGETDAAAN
VATTATMAGSSEAGKAVSPSESASEISTAPMAPGSGAGVGNREQGESGAS
GLVPVNETG
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mRNA from alignment at C-tenellus_contig7400:91..4697-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7400.1.1 ID=mRNA_C-tenellus_contig7400.1.1|Name=mRNA_C-tenellus_contig7400.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4607bp|location=Sequence derived from alignment at C-tenellus_contig7400:91..4697- (Choristocarpus tenellus KU2346)
GTCTCTCACTGCTCCAATAGAGGGCAAGGCAAAATGGATATTGCCAGTAG AGCCGACGAAGACATGGTTCACCCGGTATCAATCGGGGACCAAAATAGTG AAAGTAGTCCTACGATTGCCAATTCGATCGAGGAACAAAAATGCGAGGAA TGGCAAGACATCACTGCCCTCTGCAAAGAGGCGGCGGCAGAGCTGGGACC CGACGAGATGATACATGGGAGTCATTTCAGCCTGTTCGATGCAATGTCGG CGCTTGAGCTCATGGATCCCAAGATGGACAAGCCTTTGCCTGCGTTGCAG GTAGCCCACCTTCACCCAATATTCACCTTGTTGCTCTTTGCTCGACCTTG GCTCGTAGTTATGTATTTGCTACAAATGTGCTTAACTTTTTGCATATTTG TTTTCCTATTATGATAGCTGTAGTGCAATTAAACGCAGAGAATCAGGGCA CCGCTCTTATTTCCTGGCCTCTCCTTTTCCGTCTTGTCACCGTCCCAGTC TCTAGAATCCAGGATTGAAGATGGTGTTCTGCCAAGAAAGCTGGAAAATT TCTCGCATCGTCTTAAACCCTCGACTCCACCAGTGATCTCCTCGTCGGCT ACAGATGAGGCCTTGTTGGGGAATGAGACAATATCCCCAGCCGAGGTTCT GCTTGGGGTTCTGGACGGCATGGTAGTTTGTGAGATTGCATGGCACGAGG GTGGCACCCTGCCCGAAACCCTCTATACGTGCCTCTATCTTCATCCTCTG GCCTATTCCGCTCTCATGGACGAGCTTGGACTGGGACCACTACCGCAGGT TGGGTTCCCGAAGCTCGACCTCCAAATCGACTCAGGTTAGGGTTCGCGTA CATCAAACGCAAATCCACCCTAGTGTATGACTGAAAAATTAATTACAGTG CGTAATCTCCTTTACGTCTATATTTCTGGAAAGATAACTCTCAAGAGTTT GCCACTATTTTTGCTCTGAAGTGGGTTAGTGGAGTGTGTTAAGTATTGAG AAGTCCCCTTCTTTTTTCTGGTACGATTTTGCCTGTCCTTCCCCATACAG CCACCTTTCGCATACAATAATACTACCATAAAGATCGCATGCTCTTCTTT TCCCGTCCATGCACTGGAATCTTCCCTGGCAAAGGCAATTGTGGGAATCG GAATACAGAGAATCAAGGCAGTGGTAGCCCCAATGATGGGAGTGGTGTAT CGAGTCACTGGAGCGATAAGGCTCTAACACTGGCCCTTCTAGCTCACTCC CTGGGCACACTGCGTTGCTGCTCCATGGCGAGGGACATCATACTACTGGC AGATATCTATGATGAGGAAGATTTCAATGCCAATACCTATGGCTTTAGAC TGGTGCCACAGGTAGAAGATGGTGCCATCTTGGCCCTGTTAGCCCTGGCG GAGAGGGCTGTGGGACAGAGGGTGAGTTCCATGGGGAGGGAGAAAGCTGG GTCATACACAGCTGGGGTCTGGTTGAGGGATGTATTTGAAGGAATTGACT ACCTGTTATATCTGGGTGGCCACCTCTTGAAGGGAATAGAAAAATGTCCG ACGATACCATTTAGTGTCCTAATTGCTGCTCTCGCCACCATTTGTGGACT GTCCCAAATGTGAAGGGCATCGATATGGCAGTGCGCTTCTCCTCCCCCGA CAACACTACTGCTGTACTAGAGCTGTTTCACTGTTTTTGGAGTGCAGGGA GGGGGAGACTGATGCAGCAACATTTTGCTTTTGTCGCAGTCTTACATTTG GGGTGATTTAAGTTCGCAATCTGTGTAGTAGTGGATTGTGTTGCCCTCCA TACCCATGTGCCATCATTGTGCAATTTCTGTGTTCAAGATTGCTTTGGTA CAGACAATTACTTCACCAACAGAGCCTACAAACGTAGCAGTATGATGCAG TACGGTGAGAGAAGGACACCTCAAATTTCTGTCCACCTGTAGAAATATGT AAGAAATGGGTCGCTATTGATGTTTGTTACTGTCTGCTACCTTGAATAGG ATGGGGAGCCTTCCACTGACCGGCTGATGTTGTGACCGTAATAGAGCTGC TTATACTGAAAGTGCTCACAAACAATGGCATTATATATATATATATATAT AGATAGATATGTGTGTGTATGTGTTTATGTATATCCACTGAACACCTCAG GCGCAATGAATACAAACGCGAACACTTCTATGCTAATGTTATCGGTGTTG CCACTAATTCAGAACTACCTCTCTAGCCAGTTGAAGTCTTTTGATTCTGT GAGAGTAGTTGCCAGTGTCGATTCCTACTGTAACCGGGAATTGAATGATC CCACAACAGTCTTGGGGGTGATGGATAACTCGCTTTAGCTCAGGGTCGAT GGTCTTCGTGTGCTGCATAAAGGGGGTAGTAAAGGGGGTAGTAGATGAAT ATGGCACTGGTGAAAGAGATTCGTGGTGAAAATATCCGCTCCATACTTGT GTTTAAAGTTACGGGCACGTGACGGCAAACTTTTGTATCTGAATCTACAC CTTCAACCAACTTTCATATTATGAATAACCTCCACTAGTCACCAACGCCA ACATCATTACCACACTGTGATGAAAATCACCATATATACCGATGACGGTA TGAGTTCAAGAGTGCATACCGCCATCGAGTGAGTGATATATGTCCGGCTG CATGATCTGATGCTTGTCTGTTGCATGTCTTTGCTCAGATGTATTACATG CACTATTGCAGTATAGGGAGGCATCTGTTTTCTTTTTTAATCCAATAATA CCACCAGTACTGTTGGTGTAGGGGAAGGCTATTGCCATATGCAGCACAGG CTCTGCTGCCTGCCATCTTGCGGGTTGAGTTCTCTCACGTGTTGCCTCTT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGGACGCTATCTGCGAAG TGTCAGCGGACATAGCACGTGACAGAAAAAAAAAAATGTTCTCGACTCTG AGAAATAGCAGTGTAACTTGAATAGAAATGCTAACGCCATCAACAACGTG GAAGCCTACTTTGTTTTATCACTAGTTTAGGTCATGTATGGAGAGAACGT TATATCTGCACCGAGGACTAGACGTATCTATGAGCACAAGCGCGACATTA GTGTTCAAAAGCATAGAGCAACATCATATTTGGGGGGTTAATGATGAGAT CGATGGCACCGTCAGCGTAAAATATATATATATATATATATATATATATT ATTATTTTTTATACAGAAAAACATCCAGTAAGTGTCTTAGAAATTGATGG GGGTGCTATAGAAGTCTGATGGGAGAGTGAAGAATGTTTCACCCCAAGCT ATTCCTTCCGTTCCAAGTGCGGAACTAGCTGTACCTCTAGTGTAGTGTTA GAACGCGTGGAGGGCGCCTGTGATCGAAAAAGCCTGCCAATGTATCCCGA CATGCCTTGCCACCTTGTAGGCGTTCTTGTCCTAGTCATATTGAAGTAAA GGTGCAGCATGCGTCATATTGGCGTAACTGATATTTCGCGATTAGTCCCA GTAGTTGACAATTTGTTCCAAGGTCTTTTCCCAGTAGTTGTTTTGAGATT GCACATGATGGATGTTTGAGATTGATTCTAACTTGATTCTAACTCAGTTC CAAGAGTTTCGTGAGAATTGAAGTAGTGTGCAAGCAGTGTACAAGCAGTG TACAAGCAGTGTACAGCCTGTGCCAACGAAACTCTGCTTTCACTGCTCAG TCTCCCTACTGGCAATATAGGGTCAAGCCTTCCTCTTAACGGAAAACCAA CACGCCTTACAATAGGCTATGCACTTCAATACCAATAGTGTGATCAAACC TTGCCCTGCCACTGCATGTCCCGCTAGAGTACCTGGTGCTATTGATGGTA TGCCTGTTTACAAGACAAGACATAAGGGTGGTGGTCTCATCCCGCCTCAT CAATAGTTAGTAAAACCCCTTCCCCTGCTTCTATCTTCCACACCAAACAA ACACTGTAATAGATGGCACTGATATATGAAAAAAACCCCGTCATTCCTGT GAAGGTCCAATTGAGCTCAAATGCACAGCCACGATCCAAGGATAAGGAGG TAGGTAGCAATGAGGGCAGGGGCAGTGGCAACAGCAGCGCTAGTCTTGGC ATTGAAAATGACCACCGTGGGGAGGGAGGAGGAGAATGGGGTCCCAGCGG GGCCAAGGTGGGACAGCGTATCTTAGCCCACCTCAAAGGACGAAGGCTGT TCCTAGAGGCGTTACTGGCACTGAAGGAGGCGTTTTCTAACAAGGAACAC AAACGTCGCATGCAACTCCTTTCATTGCTGCGCAGTCAAAAAGCCAGTGT GGGCGGGGGCAGGGTAGATGAAACCAAAACAGAGGCGGTACGGCCTGCAG GAGGAGGAGGAGGAAACAGAGGAGGGGGGTGTAAAACCACCGATCAGAAA GGGGCAGGGGAAACAGATGCTGCAGCAAATGTGGCAACGACTGCAACGAT GGCGGGGAGTTCAGAAGCAGGTAAGGCGGTCAGTCCATCAGAGTCTGCAT CAGAAATTTCCACAGCTCCCATGGCCCCAGGGAGTGGTGCGGGTGTGGGG AATCGTGAGCAGGGTGAAAGTGGCGCATCAGGACTGGTTCCAGTAAACGA AACGGGG
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Coding sequence (CDS) from alignment at C-tenellus_contig7400:91..4697-

>mRNA_C-tenellus_contig7400.1.1 ID=mRNA_C-tenellus_contig7400.1.1|Name=mRNA_C-tenellus_contig7400.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1527bp|location=Sequence derived from alignment at C-tenellus_contig7400:91..4697- (Choristocarpus tenellus KU2346)
GTCTCTCACTGCTCCAATAGAGGGCAAGGCAAAATGGATATTGCCAGTAG
AGCCGACGAAGACATGGTTCACCCGGTATCAATCGGGGACCAAAATAGTG
AAAGTAGTCCTACGATTGCCAATTCGATCGAGGAACAAAAATGCGAGGAA
TGGCAAGACATCACTGCCCTCTGCAAAGAGGCGGCGGCAGAGCTGGGACC
CGACGAGATGATACATGGGAGTCATTTCAGCCTGTTCGATGCAATGTCGG
CGCTTGAGCTCATGGATCCCAAGATGGACAAGCCTTTGCCTGCGTTGCAG
TCTCTAGAATCCAGGATTGAAGATGGTGTTCTGCCAAGAAAGCTGGAAAA
TTTCTCGCATCGTCTTAAACCCTCGACTCCACCAGTGATCTCCTCGTCGG
CTACAGATGAGGCCTTGTTGGGGAATGAGACAATATCCCCAGCCGAGGTT
CTGCTTGGGGTTCTGGACGGCATGGTAGTTTGTGAGATTGCATGGCACGA
GGGTGGCACCCTGCCCGAAACCCTCTATACGTGCCTCTATCTTCATCCTC
TGGCCTATTCCGCTCTCATGGACGAGCTTGGACTGGGACCACTACCGCAG
GTTGGGTTCCCGAAGCTCGACCTCCAAATCGACTCAGGCAATTGTGGGAA
TCGGAATACAGAGAATCAAGGCAGTGGTAGCCCCAATGATGGGAGTGGTG
TATCGAGTCACTGGAGCGATAAGGCTCTAACACTGGCCCTTCTAGCTCAC
TCCCTGGGCACACTGCGTTGCTGCTCCATGGCGAGGGACATCATACTACT
GGCAGATATCTATGATGAGGAAGATTTCAATGCCAATACCTATGGCTTTA
GACTGGTGCCACAGGTAGAAGATGGTGCCATCTTGGCCCTGTTAGCCCTG
GCGGAGAGGGCTGTGGGACAGAGGGTCCAATTGAGCTCAAATGCACAGCC
ACGATCCAAGGATAAGGAGGTAGGTAGCAATGAGGGCAGGGGCAGTGGCA
ACAGCAGCGCTAGTCTTGGCATTGAAAATGACCACCGTGGGGAGGGAGGA
GGAGAATGGGGTCCCAGCGGGGCCAAGGTGGGACAGCGTATCTTAGCCCA
CCTCAAAGGACGAAGGCTGTTCCTAGAGGCGTTACTGGCACTGAAGGAGG
CGTTTTCTAACAAGGAACACAAACGTCGCATGCAACTCCTTTCATTGCTG
CGCAGTCAAAAAGCCAGTGTGGGCGGGGGCAGGGTAGATGAAACCAAAAC
AGAGGCGGTACGGCCTGCAGGAGGAGGAGGAGGAAACAGAGGAGGGGGGT
GTAAAACCACCGATCAGAAAGGGGCAGGGGAAACAGATGCTGCAGCAAAT
GTGGCAACGACTGCAACGATGGCGGGGAGTTCAGAAGCAGGTAAGGCGGT
CAGTCCATCAGAGTCTGCATCAGAAATTTCCACAGCTCCCATGGCCCCAG
GGAGTGGTGCGGGTGTGGGGAATCGTGAGCAGGGTGAAAGTGGCGCATCA
GGACTGGTTCCAGTAAACGAAACGGGG
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