mRNA_C-tenellus_contig736.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig736.4.1 vs. uniprot
Match: A0A811UVA7_CERCA ((Mediterranean fruit fly) hypothetical protein n=1 Tax=Ceratitis capitata TaxID=7213 RepID=A0A811UVA7_CERCA) HSP 1 Score: 97.1 bits (240), Expect = 5.500e-21 Identity = 50/119 (42.02%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 4 TGYLILMNGAPIAWKSKVQGAVTTSSSEAEWTAMVHEMRHAIFLRGILGELGILK-GITTWYGDNRGAIQAVTTEGFNGRTRHVDIKLKCAREYDSKGFFKVKYIPTTLQLADILTKRL 357 TGY+ L++GA I+WKS+ Q V SS+EAE+ ++ + A++LR +L E+G+ K T Y DNRGA F+ RT+H+DIK RE S G F +K++ T +AD++TK L Sbjct: 792 TGYVFLLSGAVISWKSQKQRTVALSSTEAEYVSLAESAKEAVYLRSLLNEIGLQKLADATIYVDNRGAQCLANDPVFHARTKHIDIKHHFVRECISAGLFSLKHVSTQEMIADVMTKPL 910
BLAST of mRNA_C-tenellus_contig736.4.1 vs. uniprot
Match: W8B6G9_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Ceratitis capitata TaxID=7213 RepID=W8B6G9_CERCA) HSP 1 Score: 97.1 bits (240), Expect = 5.640e-21 Identity = 50/119 (42.02%), Postives = 74/119 (62.18%), Query Frame = 1 Query: 4 TGYLILMNGAPIAWKSKVQGAVTTSSSEAEWTAMVHEMRHAIFLRGILGELGILK-GITTWYGDNRGAIQAVTTEGFNGRTRHVDIKLKCAREYDSKGFFKVKYIPTTLQLADILTKRL 357 TGY+ L++GA I+WKS+ Q V SS+EAE+ ++ + A++LR +L E+G+ K T Y DNRGA F+ RT+H+DIK RE S G F +K++ T +AD++TK L Sbjct: 1241 TGYVFLLSGAVISWKSQKQRTVALSSTEAEYVSLAESAKEAVYLRSLLNEIGLQKLADATIYVDNRGAQCLANDPVFHARTKHIDIKHHFVRECISAGLFSLKHVSTQEMIADVMTKPL 1359
BLAST of mRNA_C-tenellus_contig736.4.1 vs. uniprot
Match: A0A6G0S5Y8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0S5Y8_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.880e-20 Identity = 47/114 (41.23%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 13 LILMNGAPIAWKSKVQGAVTTSSSEAEWTAMVHEMRHAIFLRGILGELGI-LKGITTWYGDNRGAIQAVTTEGFNGRTRHVDIKLKCAREYDSKGFFKVKYIPTTLQLADILTK 351 LILM G P+ +KSK Q V SS+EAE+ AM + ++LR +LGE+GI + G T + DN+ AI G+ R +H+D++ R++ KG K++Y+ + QLAD LTK Sbjct: 68 LILMCGGPVVFKSKRQTTVALSSAEAEYMAMAMTTQEVVWLRFLLGEMGIKMNGPTAIHADNKSAISIAVNHGYTPRAKHIDLRAHFVRDHVEKGSIKLEYVASEDQLADYLTK 181
BLAST of mRNA_C-tenellus_contig736.4.1 vs. uniprot
Match: A0A427XXX1_9TREE (Uncharacterized protein n=2 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427XXX1_9TREE) HSP 1 Score: 89.4 bits (220), Expect = 6.050e-20 Identity = 46/119 (38.66%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 4 TGYLILMNGAPIAWKSKVQGAVTTSSSEAEWTAMVHEMRHAIFLRGILGELGIL-KGITTWYGDNRGAIQAVTTEGFNGRTRHVDIKLKCAREYDSKGFFKVKYIPTTLQLADILTKRL 357 TG++ ++ G+ I W S+ Q V +S+ EAE+ A+ R A++L+G+L ELG+ K T + DN+GAI+ G + RT+H+ I+ RE G ++ Y+PT Q+ADI TK L Sbjct: 33 TGHIFMLGGSAIVWTSRRQATVASSTVEAEYVAVSEAAREAVWLKGLLDELGVTPKEPTPLWCDNQGAIRLARNPGTHRRTKHIAIRWHLIRELIEDGVVRLGYVPTASQVADIFTKAL 151
BLAST of mRNA_C-tenellus_contig736.4.1 vs. uniprot
Match: A0A7C9E2K1_OPUST (Uncharacterized protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9E2K1_OPUST) HSP 1 Score: 87.4 bits (215), Expect = 9.480e-20 Identity = 48/121 (39.67%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 1 VTGYLILMNGAPIAWKSKVQGAVTTSSSEAEWTAMVHEMRHAIFLRGILGELGI--LKGITTWYGDNRGAIQAVTTEGFNGRTRHVDIKLKCAREYDSKGFFKVKYIPTTLQLADILTKRL 357 VTGY++L+ +PI+WKSK Q V+ SS+EAE+ AM +L +L ELG+ + +T + DN+ A+Q F+ RT+H+++ R +G ++ Y+PT+LQLADIL K L Sbjct: 4 VTGYMLLLGNSPISWKSKKQSTVSKSSTEAEYHAMSQAAAKVTWLVRLLSELGVPHTRPVTLHF-DNQSALQIAKILVFHERTKHIEVDCHFTRAKVLEGLLQLTYLPTSLQLADILNKIL 123
BLAST of mRNA_C-tenellus_contig736.4.1 vs. uniprot
Match: UPI0009007011 (uncharacterized protein LOC109136561 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0009007011) HSP 1 Score: 92.0 bits (227), Expect = 1.040e-19 Identity = 48/120 (40.00%), Postives = 71/120 (59.17%), Query Frame = 1 Query: 1 VTGYLILMNGAPIAWKSKVQGAVTTSSSEAEWTAMVHEMRHAIFLRGILGELGILK-GITTWYGDNRGAIQAVTTEGFNGRTRHVDIKLKCAREYDSKGFFKVKYIPTTLQLADILTKRL 357 +TGYL+L +PI+WKSK QG ++ SSSEAE+ AM ++ +L ELG+ K T + DN+ A+ F+ RT+H+DI R+ +G ++ Y+PT QLAD+ TK L Sbjct: 188 ITGYLLLFGKSPISWKSKKQGTISKSSSEAEYRAMASAAAEVTWVVRLLEELGVTKLKPVTLFCDNQSALHIARNPVFHERTKHIDIDCHFTRDKVLEGLLQLSYLPTNSQLADVFTKSL 307
BLAST of mRNA_C-tenellus_contig736.4.1 vs. uniprot
Match: A0A6A2X1M2_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2X1M2_HIBSY) HSP 1 Score: 93.2 bits (230), Expect = 1.280e-19 Identity = 44/119 (36.97%), Postives = 76/119 (63.87%), Query Frame = 1 Query: 1 VTGYLILMNGAPIAWKSKVQGAVTTSSSEAEWTAMVHEMRHAIFLRGILGELGILKGITTWYGDNRGAIQAVTTEGFNGRTRHVDIKLKCAREYDSKGFFKVKYIPTTLQLADILTKRL 357 +TG++ + G ++WKS +Q V S++E E+ A++ ++ A++L+G++ ELGI + + T + DN+ AI + F+ R++H+D+KL R+ +KG VK IPT AD+LTK L Sbjct: 1980 LTGFIFTVFGTAVSWKSNLQSVVALSTTEVEYIAVIEAIKQAMWLKGMVEELGIQQKVVTMFCDNQSAIHLTKNQVFHERSKHIDVKLHFVRDVVAKGSIIVKKIPTEENPADMLTKAL 2098
BLAST of mRNA_C-tenellus_contig736.4.1 vs. uniprot
Match: A0A6A3KLU3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3KLU3_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.280e-19 Identity = 47/114 (41.23%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 13 LILMNGAPIAWKSKVQGAVTTSSSEAEWTAMVHEMRHAIFLRGILGELGI-LKGITTWYGDNRGAIQAVTTEGFNGRTRHVDIKLKCAREYDSKGFFKVKYIPTTLQLADILTK 351 LILM G P+ +KSK Q V SS+EAE+ AM + ++LR +LGE+GI + G T + DN+ AI G+ R +H+D++ R++ KG K++Y+ + QLAD LTK Sbjct: 149 LILMCGGPVVFKSKRQTTVALSSAEAEYMAMAMTTQEVVWLRFLLGEMGIKMNGPTAIHADNKSAISIAVNHGYTPRAKHIDLRAHFVRDHVEKGSIKLEYVASEDQLADYLTK 262
BLAST of mRNA_C-tenellus_contig736.4.1 vs. uniprot
Match: UPI0015E822C0 (Ty1/Copia family ribonuclease HI n=1 Tax=Escherichia sp. R8 TaxID=2161825 RepID=UPI0015E822C0) HSP 1 Score: 87.8 bits (216), Expect = 1.490e-19 Identity = 48/117 (41.03%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 4 TGYLILMNGAPIAWKSKVQGAVTTSSSEAEWTAMVHEMRHAIFLRGILGELGI-LKGITTWYGDNRGAIQAVTTEGFNGRTRHVDIKLKCAREYDSKGFFKVKYIPTTLQLADILTK 351 TGY+ AP++WKS +Q V S++EAE+ A+ ++ AI+L+G+L ELG+ KGIT + D++ AIQ + ++ RT+H+D++ RE +G VK I TT AD+LTK Sbjct: 24 TGYVFTFAKAPVSWKSTLQSTVALSTTEAEYMAITDAVKEAIWLQGLLKELGVEQKGITIFC-DSQSAIQLAKNQVYHARTKHIDVRYHFVREIIEEGGVTVKKIHTTENPADMLTK 139
BLAST of mRNA_C-tenellus_contig736.4.1 vs. uniprot
Match: UPI000B8B293C (uncharacterized protein LOC110789442 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B293C) HSP 1 Score: 90.9 bits (224), Expect = 1.710e-19 Identity = 48/121 (39.67%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 1 VTGYLILMNGAPIAWKSKVQGAVTTSSSEAEWTAMVHEMRHAIFLRGILGELGI--LKGITTWYGDNRGAIQAVTTEGFNGRTRHVDIKLKCAREYDSKGFFKVKYIPTTLQLADILTKRL 357 +TGY++L+ G+P++WKSK QG V+ SS+EAE+ AM +L +L +LG+ LK +T + DN+ A+ F+ RT+H++I R+ +G + Y+PT QLADI TK L Sbjct: 169 ITGYILLLGGSPVSWKSKKQGTVSKSSAEAEYRAMAAAASEVTWLVSLLEDLGVHNLKPVTL-HCDNQSALHIARNPVFHERTKHIEIDCHFTRDKVLEGLLHLSYLPTQQQLADIFTKPL 288 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig736.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig736.4.1 >prot_C-tenellus_contig736.4.1 ID=prot_C-tenellus_contig736.4.1|Name=mRNA_C-tenellus_contig736.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=115bp MNGAPIAWKSKVQGAVTTSSSEAEWTAMVHEMRHAIFLRGILGELGILKGback to top mRNA from alignment at C-tenellus_contig736:15016..15381- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig736.4.1 ID=mRNA_C-tenellus_contig736.4.1|Name=mRNA_C-tenellus_contig736.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=366bp|location=Sequence derived from alignment at C-tenellus_contig736:15016..15381- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig736:15016..15381- >mRNA_C-tenellus_contig736.4.1 ID=mRNA_C-tenellus_contig736.4.1|Name=mRNA_C-tenellus_contig736.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=345bp|location=Sequence derived from alignment at C-tenellus_contig736:15016..15381- (Choristocarpus tenellus KU2346)back to top |