mRNA_C-tenellus_contig7357.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7357.1.2 vs. uniprot
Match: A0A6H5KPY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY0_9PHAE) HSP 1 Score: 187 bits (476), Expect = 1.310e-55 Identity = 104/180 (57.78%), Postives = 118/180 (65.56%), Query Frame = 2 Query: 236 LFHEVKCWQECVVPNFVTSNCFIAQAYAKSIAGFLRDHLGRQWSGRDA-GQQPVYIVEIGAGSAKLSYVLLKKLLALAKYLPKARDTRARTGPTHSGARTSPSDPGEDQDDHPAEVGEADMPPAASSRGGGQGSSELCFKYIITDFSHANFGFWINHPKFQELFSLGVIDFAVFDAEAAP 772 + EVKCWQECVVPNFVTSNCFIAQAYA +IA FLRDHLGR+ G A G+QP E GAGSAKLSYVLL+KLL L++YLP+ R A G A + D A RG CFKY+ITDFSHANFGFW+NHP+ QELF+LGV+DFAVFDAEA P Sbjct: 1 MHREVKCWQECVVPNFVTSNCFIAQAYASAIASFLRDHLGRREKGWVAVGEQP----EAGAGSAKLSYVLLQKLLKLSEYLPRPRGNAASDG---------------------AASADGDNNTATGGRG-------FCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARP 148
BLAST of mRNA_C-tenellus_contig7357.1.2 vs. uniprot
Match: D8LQH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH4_ECTSI) HSP 1 Score: 113 bits (282), Expect = 8.520e-25 Identity = 63/121 (52.07%), Postives = 75/121 (61.98%), Query Frame = 2 Query: 410 GAGSAKLSYVLLKKLLALAKYLPKARDTRARTGPTHSGARTSPSDPGEDQDDHPAEVGEADMPPAASSRGGGQGSSELCFKYIITDFSHANFGFWINHPKFQELFSLGVIDFAVFDAEAAP 772 GAGSAKLSYVLL+KLL L++YLP+ R A DD + G+ + A RG CFKY+ITDFSHANFGFW+NHP+ QELF+LGV+DFAVFDAEA P Sbjct: 20 GAGSAKLSYVLLQKLLKLSEYLPQPRGNAA-------------------SDDAASADGDNNTATATGGRG-------FCFKYVITDFSHANFGFWMNHPRLQELFTLGVVDFAVFDAEARP 114
BLAST of mRNA_C-tenellus_contig7357.1.2 vs. uniprot
Match: A0A7S1CK01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CK01_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 9.960e-20 Identity = 62/179 (34.64%), Postives = 86/179 (48.04%), Query Frame = 2 Query: 233 SLFHEVK--CWQECVVPNFVTSNCFIAQAYAKSIAGFLRDHLGRQWSGRDAGQQPVYIVEIGAGSAKLSYVLLKKLLALAKYLPKARDTRARTGPTHSGARTSPSDPGEDQDDHPAEVGEADMPPAASSRGGGQGSSELCFKYIITDFSHANFGFWINHPKFQELFSLGVIDFAVFDAE 763 S + EV W E +VPNFVT+N F+A AYAKSI G +RD + D + P+YIVE+GAG KL +++ ++LL + ++ P G G E FKY++TDF+ N FW+ H F ELF +GV+D AV+DAE Sbjct: 203 SFYDEVAIGAWSEAIVPNFVTTNAFLASAYAKSIMGLIRDLFDSPSAPGDRAK-PLYIVEVGAGHGKLGFLICRELLRMREFFP-----------------------------------------------AGHGL-EFPFKYVMTDFTAHNVEFWMQHASFAELFEMGVLDCAVWDAE 332
BLAST of mRNA_C-tenellus_contig7357.1.2 vs. uniprot
Match: A0A7S1CMV9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMV9_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.300e-19 Identity = 62/179 (34.64%), Postives = 86/179 (48.04%), Query Frame = 2 Query: 233 SLFHEVK--CWQECVVPNFVTSNCFIAQAYAKSIAGFLRDHLGRQWSGRDAGQQPVYIVEIGAGSAKLSYVLLKKLLALAKYLPKARDTRARTGPTHSGARTSPSDPGEDQDDHPAEVGEADMPPAASSRGGGQGSSELCFKYIITDFSHANFGFWINHPKFQELFSLGVIDFAVFDAE 763 S + EV W E +VPNFVT+N F+A AYAKSI G +RD + D + P+YIVE+GAG KL +++ ++LL + ++ P G G E FKY++TDF+ N FW+ H F ELF +GV+D AV+DAE Sbjct: 203 SFYDEVAIGAWSEAIVPNFVTTNAFLASAYAKSIMGLIRDLFDSPSAPGDRAK-PLYIVEVGAGHGKLGFLICRELLRMREFFP-----------------------------------------------AGHGL-EFPFKYVMTDFTAHNVEFWMQHASFAELFEMGVLDCAVWDAE 332
BLAST of mRNA_C-tenellus_contig7357.1.2 vs. uniprot
Match: A0A7S3LQS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LQS3_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 8.640e-13 Identity = 33/82 (40.24%), Postives = 51/82 (62.20%), Query Frame = 2 Query: 242 HEVKCWQECVVPNFVTSNCFIAQAYAKSIAGFLRD---HLGRQWSGRDAGQQPVYIVEIGAGSAKLSYVLLKKLLALAKYLP 478 + + CW++ V+PNFVTSNCF+A Y + I F+RD H+ Q V ++EIGAGS K ++ +++LL L+ +LP Sbjct: 47 YNIDCWRKSVIPNFVTSNCFVANGYTRVILDFIRDYRKHMSLLHQNEKYEMQKVVVLEIGAGSGKFAFNCIERLLQLSSFLP 128
BLAST of mRNA_C-tenellus_contig7357.1.2 vs. uniprot
Match: D7FJM6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJM6_ECTSI) HSP 1 Score: 78.6 bits (192), Expect = 8.980e-13 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 2 Query: 242 HEVKCWQECVVPNFVTSNCFIAQAYAKSIAGFLRDHLGRQWSGRDAGQQPVYIVEIGAGSAKLSYVLLKKLLALAKYLP 478 H V+CW++ VVP FVTSN FIA AYA+ + GF+RD +SGR +P+ I+EIGAG K S ++L+ LL + ++LP Sbjct: 81 HHVQCWEKMVVPCFVTSNSFIANAYARILVGFMRDWF--LFSGRADQSEPLLILEIGAGHGKFSCLVLQHLLEMREFLP 157
BLAST of mRNA_C-tenellus_contig7357.1.2 vs. uniprot
Match: A0A835YJE5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJE5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.200e-11 Identity = 38/91 (41.76%), Postives = 60/91 (65.93%), Query Frame = 2 Query: 248 VKCWQECVVPNFVTSNCFIAQAYAKSIAGFLRDHLGRQWSGRD-AGQQPVYIVEIGAGSAKLSYVLLKKLLALA--KYLPKARDTRARTGP 511 ++CW+ VVP+FVTSN FIAQ A+ IAG++RD L + A +PVYI+E+GAG K S+++L+ L+ +A K++P+ + + P Sbjct: 74 MQCWESMVVPSFVTSNAFIAQQTARVIAGYIRDCLVEKADQNGVAADEPVYIIEVGAGHGKFSFLVLQALMEMAEAKFIPELKQPSSTPAP 164
BLAST of mRNA_C-tenellus_contig7357.1.2 vs. uniprot
Match: D8MAC6_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8MAC6_BLAHO) HSP 1 Score: 73.2 bits (178), Expect = 4.910e-11 Identity = 33/75 (44.00%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 254 CWQECVVPNFVTSNCFIAQAYAKSIAGFLRDHLGRQWSGRDAGQQPVYIVEIGAGSAKLSYVLLKKLLALAKYLP 478 CW E +VP F+TSN +IA YA I G++ D+ R + +D +P+YIVE+GAG KL +++L L LA+++P Sbjct: 34 CWTEAIVPQFITSNSYIAYQYANCILGYINDYYSRPDAKKD---KPIYIVEVGAGHGKLGFLILNHLEELAEFMP 105
BLAST of mRNA_C-tenellus_contig7357.1.2 vs. uniprot
Match: A0A196S9E3_BLAHN (Type II protein arginine methyltransferase n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S9E3_BLAHN) HSP 1 Score: 72.8 bits (177), Expect = 6.450e-11 Identity = 32/76 (42.11%), Postives = 51/76 (67.11%), Query Frame = 2 Query: 251 KCWQECVVPNFVTSNCFIAQAYAKSIAGFLRDHLGRQWSGRDAGQQPVYIVEIGAGSAKLSYVLLKKLLALAKYLP 478 CW + +VP+FVTSN +IA YA I G++RD+ + +D +P+YIVE+GAG KL +++L L L++++P Sbjct: 33 SCWTDFIVPHFVTSNSYIAYQYANCILGYIRDYYSSPDANKD---EPIYIVEVGAGHGKLGFLILNHLAELSEFMP 105
BLAST of mRNA_C-tenellus_contig7357.1.2 vs. uniprot
Match: UPI00071186DF (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI00071186DF) HSP 1 Score: 71.2 bits (173), Expect = 2.160e-10 Identity = 32/76 (42.11%), Postives = 49/76 (64.47%), Query Frame = 2 Query: 251 KCWQECVVPNFVTSNCFIAQAYAKSIAGFLRDHLGRQWSGRDAGQQPVYIVEIGAGSAKLSYVLLKKLLALAKYLP 478 CW + +VP+FVTSN +IA YA I G++RD+ S ++P+YIVE+GAG KL +++L L L +++P Sbjct: 33 SCWTDAIVPHFVTSNSYIAYQYANCILGYIRDYYN---SPNANNEEPIYIVEVGAGHGKLGFLILNHLADLKEFMP 105 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7357.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7357.1.2 >prot_C-tenellus_contig7357.1.2 ID=prot_C-tenellus_contig7357.1.2|Name=mRNA_C-tenellus_contig7357.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=263bp MAVLGYRVVSSSTSAPVDNTFQIRLVRNTVGYVCAIVCNLPVRQRDVSATback to top mRNA from alignment at C-tenellus_contig7357:3223..4868+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7357.1.2 ID=mRNA_C-tenellus_contig7357.1.2|Name=mRNA_C-tenellus_contig7357.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1646bp|location=Sequence derived from alignment at C-tenellus_contig7357:3223..4868+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7357:3223..4868+ >mRNA_C-tenellus_contig7357.1.2 ID=mRNA_C-tenellus_contig7357.1.2|Name=mRNA_C-tenellus_contig7357.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=789bp|location=Sequence derived from alignment at C-tenellus_contig7357:3223..4868+ (Choristocarpus tenellus KU2346)back to top |