mRNA_C-tenellus_contig7275.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7275.2.1
Unique NamemRNA_C-tenellus_contig7275.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7275.2.1 vs. uniprot
Match: UPI000D1CAAF0 (uncharacterized protein LOC112343786 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CAAF0)

HSP 1 Score: 82.4 bits (202), Expect = 1.380e-18
Identity = 42/88 (47.73%), Postives = 63/88 (71.59%), Query Frame = 1
Query:    1 NMKDVKDVVQHFDFSKMSSFSKQKNEGLIFSLAPSFGQLNSQSVKTMDDELKVIIAGTTHLIAKL--EDKSWQNVVGALIQNSLLEPM 258
            ++K++ D+V +FDFSK+   SK   + L  +LAPSFG LN ++VK MD+ LKV I+GTT L+AK+  E+++W+ V    +QN L+EPM
Sbjct:   13 SLKEIGDIVANFDFSKIDVRSKSSEDYLHTNLAPSFGTLNPETVKKMDEVLKVCISGTTTLLAKVPPEERTWEKVNSMFMQNPLVEPM 100          
BLAST of mRNA_C-tenellus_contig7275.2.1 vs. uniprot
Match: UPI000D1CF728 (uncharacterized protein LOC112347433 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CF728)

HSP 1 Score: 80.9 bits (198), Expect = 2.310e-17
Identity = 41/88 (46.59%), Postives = 63/88 (71.59%), Query Frame = 1
Query:    1 NMKDVKDVVQHFDFSKMSSFSKQKNEGLIFSLAPSFGQLNSQSVKTMDDELKVIIAGTTHLIAKL--EDKSWQNVVGALIQNSLLEPM 258
            + K++ D+V +FDFSK+   SK   + L  +LAPSFG LN+++VK MD+ LKV I+GTT L+AK+  ++++W+ V    +QN L+EPM
Sbjct:   13 SFKEIGDIVANFDFSKIDVRSKSAEDYLQTNLAPSFGALNAETVKKMDEVLKVCISGTTDLLAKVAPKERTWEKVNSMFMQNPLVEPM 100          
BLAST of mRNA_C-tenellus_contig7275.2.1 vs. uniprot
Match: A0A2R6WK78_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WK78_MARPO)

HSP 1 Score: 82.0 bits (201), Expect = 5.220e-17
Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 1
Query:    7 KDVKDVVQHFDFSKMSSFSKQKNEGLIFSLAPSFGQLNSQSVKTMDDELKVIIAGTTHLIAKLEDKSWQNVVGALIQNSLLEP 255
            KD+  +V  FD+SK +  S    E L   LAPS+G+L S SVK +D+ LK++IAGT   I KL DKSW++V+G ++Q+ LLEP
Sbjct:   16 KDIGTIVSTFDWSKCNVRSSHSEEYLHTDLAPSYGKLTSDSVKALDENLKIMIAGTLTTIGKLTDKSWKSVLGTMMQHPLLEP 98          
BLAST of mRNA_C-tenellus_contig7275.2.1 vs. uniprot
Match: A0A8G0LNW2_9HYPO (Uncharacterized protein n=1 Tax=Trichoderma simmonsii TaxID=1491479 RepID=A0A8G0LNW2_9HYPO)

HSP 1 Score: 81.6 bits (200), Expect = 7.200e-17
Identity = 37/82 (45.12%), Postives = 57/82 (69.51%), Query Frame = 1
Query:   10 DVKDVVQHFDFSKMSSFSKQKNEGLIFSLAPSFGQLNSQSVKTMDDELKVIIAGTTHLIAKLEDKSWQNVVGALIQNSLLEP 255
            ++ D+VQ+FDFSK++      N  L   LAPSFG+LN +S++ +DD LK++IAG    + ++ +KSW  V+G ++QN LLEP
Sbjct:   19 EIGDLVQNFDFSKINPTETNSNGFLPIDLAPSFGKLNKESLQVLDDHLKIMIAGNLKFLGRVPEKSWNAVLGNMMQNDLLEP 100          
BLAST of mRNA_C-tenellus_contig7275.2.1 vs. uniprot
Match: UPI000D1C79E2 (uncharacterized protein LOC112348592 n=8 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C79E2)

HSP 1 Score: 81.6 bits (200), Expect = 7.520e-17
Identity = 41/88 (46.59%), Postives = 64/88 (72.73%), Query Frame = 1
Query:    1 NMKDVKDVVQHFDFSKMSSFSKQKNEGLIFSLAPSFGQLNSQSVKTMDDELKVIIAGTTHLIAKL--EDKSWQNVVGALIQNSLLEPM 258
            ++K++ D+V +FDFSK+   SK   + L  +LAPSFG LN+++VK MD+ LKV I+GTT L+AK+  ++++W+ V    +QN L+EPM
Sbjct:   13 SLKEIGDIVANFDFSKIDVRSKSAKDYLHTNLAPSFGTLNAETVKKMDEVLKVCISGTTDLLAKVAPKERTWEKVNSMFMQNPLVEPM 100          
BLAST of mRNA_C-tenellus_contig7275.2.1 vs. uniprot
Match: A0A401GW53_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GW53_9APHY)

HSP 1 Score: 81.6 bits (200), Expect = 7.630e-17
Identity = 38/86 (44.19%), Postives = 62/86 (72.09%), Query Frame = 1
Query:    7 KDVKDVVQHFDFSKMSSFSKQKNEGLIFSLAPSFGQLNSQSVKTMDDELKVIIAGTTHLIAKL--EDKSWQNVVGALIQNSLLEPM 258
            KD+ ++++ FDF++M+     +++ L   LAPSFG L+ +S+K +D++LKV+I GTT LIAK+    +SW N+V  L+QN L+EP+
Sbjct:   17 KDIGEILKSFDFNQMNVKDSSRDDHLNIGLAPSFGTLDRESIKNVDEKLKVMIVGTTKLIAKMPPHKRSWDNIVSVLMQNPLIEPL 102          
BLAST of mRNA_C-tenellus_contig7275.2.1 vs. uniprot
Match: A0A0F9XJE9_TRIHA (Uncharacterized protein n=1 Tax=Trichoderma harzianum TaxID=5544 RepID=A0A0F9XJE9_TRIHA)

HSP 1 Score: 80.1 bits (196), Expect = 2.960e-16
Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 1
Query:   10 DVKDVVQHFDFSKMSSFSKQKNEGLIFSLAPSFGQLNSQSVKTMDDELKVIIAGTTHLIAKLEDKSWQNVVGALIQNSLLEP 255
            ++ D+VQ+FDFSK++      NE L   LAPSFG+LN +S++ +DD LK++IAG    +    DKSW  V+  ++QN LL+P
Sbjct:   19 EIGDLVQNFDFSKINPTGSNSNEFLHIDLAPSFGKLNKESLRELDDHLKIMIAGNLKALGNQPDKSWNAVLSNMMQNPLLDP 100          
BLAST of mRNA_C-tenellus_contig7275.2.1 vs. uniprot
Match: UPI000D1C4205 (uncharacterized protein LOC112348676 n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C4205)

HSP 1 Score: 79.7 bits (195), Expect = 4.030e-16
Identity = 40/88 (45.45%), Postives = 63/88 (71.59%), Query Frame = 1
Query:    1 NMKDVKDVVQHFDFSKMSSFSKQKNEGLIFSLAPSFGQLNSQSVKTMDDELKVIIAGTTHLIAKL--EDKSWQNVVGALIQNSLLEPM 258
            ++K++ D+V +FDFSK+   SK   + L  +L PSFG LN+++VK MD+ LKV I+GTT L+AK+  ++++W+ V    +QN L+EPM
Sbjct:   13 SLKEIGDIVANFDFSKIDVRSKSAEDYLHTNLTPSFGTLNAETVKKMDEVLKVCISGTTTLLAKVPPKERTWEKVNSMFMQNPLVEPM 100          
BLAST of mRNA_C-tenellus_contig7275.2.1 vs. uniprot
Match: UPI000D1CDCE4 (uncharacterized protein LOC112348250 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CDCE4)

HSP 1 Score: 79.3 bits (194), Expect = 5.400e-16
Identity = 41/88 (46.59%), Postives = 62/88 (70.45%), Query Frame = 1
Query:    1 NMKDVKDVVQHFDFSKMSSFSKQKNEGLIFSLAPSFGQLNSQSVKTMDDELKVIIAGTTHLIAKL--EDKSWQNVVGALIQNSLLEPM 258
            ++K++ ++V  FDFSK+   S    + L  +LAPSFG LN+++VK MD+ LKV IAGTT L+AK+  E+++W+ V    +QN L+EPM
Sbjct:   10 SLKEIGEIVGSFDFSKIDVRSTSAEDYLHTNLAPSFGDLNAETVKKMDEVLKVCIAGTTTLLAKVPPEERTWEKVNSMFMQNPLVEPM 97          
BLAST of mRNA_C-tenellus_contig7275.2.1 vs. uniprot
Match: A0A2R6X9X0_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X9X0_MARPO)

HSP 1 Score: 77.8 bits (190), Expect = 2.120e-15
Identity = 37/83 (44.58%), Postives = 58/83 (69.88%), Query Frame = 1
Query:    7 KDVKDVVQHFDFSKMSSFSKQKNEGLIFSLAPSFGQLNSQSVKTMDDELKVIIAGTTHLIAKLEDKSWQNVVGALIQNSLLEP 255
            KD+  +V +FD+SK S     +NE L  +LAP++G+L  +S+K +D+ LK++IAGT   I KL DKSW++V+  ++Q+ LL P
Sbjct:   16 KDIGTIVSNFDWSKCSVRDSHRNEYLQTNLAPAYGELTDESIKDLDNSLKIMIAGTLISIGKLTDKSWKSVLSTMMQHPLLVP 98          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7275.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000D1CAAF01.380e-1847.73uncharacterized protein LOC112343786 n=1 Tax=Selag... [more]
UPI000D1CF7282.310e-1746.59uncharacterized protein LOC112347433 n=1 Tax=Selag... [more]
A0A2R6WK78_MARPO5.220e-1749.40Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A8G0LNW2_9HYPO7.200e-1745.12Uncharacterized protein n=1 Tax=Trichoderma simmon... [more]
UPI000D1C79E27.520e-1746.59uncharacterized protein LOC112348592 n=8 Tax=Selag... [more]
A0A401GW53_9APHY7.630e-1744.19Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A0F9XJE9_TRIHA2.960e-1645.12Uncharacterized protein n=1 Tax=Trichoderma harzia... [more]
UPI000D1C42054.030e-1645.45uncharacterized protein LOC112348676 n=3 Tax=Selag... [more]
UPI000D1CDCE45.400e-1646.59uncharacterized protein LOC112348250 n=2 Tax=Selag... [more]
A0A2R6X9X0_MARPO2.120e-1544.58Uncharacterized protein n=2 Tax=Marchantia polymor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7275contigC-tenellus_contig7275:5700..5957 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog5127.CCT63722
Model size258
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.84e-11
EggNOG OGs2D030@1|root,2SCKW@2759|Eukaryota,3AKU3@33154|Opisthokonta,3PDPX@4751|Fungi,3R3T4@4890|Ascomycota
Cds size255
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790025.3139532-CDS-C-tenellus_contig7275:5699..59541680790025.3139532-CDS-C-tenellus_contig7275:5699..5954Choristocarpus tenellus KU2346CDSC-tenellus_contig7275 5700..5954 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790025.3259861-UTR-C-tenellus_contig7275:5954..59571680790025.3259861-UTR-C-tenellus_contig7275:5954..5957Choristocarpus tenellus KU2346UTRC-tenellus_contig7275 5955..5957 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7275.2.1prot_C-tenellus_contig7275.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7275 5700..5954 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7275.2.1

>prot_C-tenellus_contig7275.2.1 ID=prot_C-tenellus_contig7275.2.1|Name=mRNA_C-tenellus_contig7275.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=85bp
MKDVKDVVQHFDFSKMSSFSKQKNEGLIFSLAPSFGQLNSQSVKTMDDEL
KVIIAGTTHLIAKLEDKSWQNVVGALIQNSLLEPM
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mRNA from alignment at C-tenellus_contig7275:5700..5957-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7275.2.1 ID=mRNA_C-tenellus_contig7275.2.1|Name=mRNA_C-tenellus_contig7275.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=258bp|location=Sequence derived from alignment at C-tenellus_contig7275:5700..5957- (Choristocarpus tenellus KU2346)
AACATGAAAGATGTCAAGGATGTGGTTCAGCACTTCGACTTCAGCAAGAT GAGCAGTTTTAGCAAGCAGAAAAATGAAGGTCTCATATTCTCCCTCGCGC CATCGTTCGGCCAGCTCAATAGCCAGAGCGTGAAGACCATGGACGACGAA TTGAAGGTCATCATTGCTGGCACTACCCACCTCATCGCTAAGTTGGAAGA CAAATCTTGGCAGAACGTTGTTGGTGCCCTAATCCAAAACTCCCTGTTGG AGCCCATG
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Coding sequence (CDS) from alignment at C-tenellus_contig7275:5700..5957-

>mRNA_C-tenellus_contig7275.2.1 ID=mRNA_C-tenellus_contig7275.2.1|Name=mRNA_C-tenellus_contig7275.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=255bp|location=Sequence derived from alignment at C-tenellus_contig7275:5700..5957- (Choristocarpus tenellus KU2346)
ATGAAAGATGTCAAGGATGTGGTTCAGCACTTCGACTTCAGCAAGATGAG
CAGTTTTAGCAAGCAGAAAAATGAAGGTCTCATATTCTCCCTCGCGCCAT
CGTTCGGCCAGCTCAATAGCCAGAGCGTGAAGACCATGGACGACGAATTG
AAGGTCATCATTGCTGGCACTACCCACCTCATCGCTAAGTTGGAAGACAA
ATCTTGGCAGAACGTTGTTGGTGCCCTAATCCAAAACTCCCTGTTGGAGC
CCATG
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