mRNA_C-tenellus_contig7275.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7275.1.1
Unique NamemRNA_C-tenellus_contig7275.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig7275.1.1 vs. uniprot
Match: A0A8H6Z8U3_9AGAR (Uncharacterized protein n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6Z8U3_9AGAR)

HSP 1 Score: 65.9 bits (159), Expect = 2.130e-11
Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 1
Query:    1 IKLTAWSDSRRVVMVKRNKNGITREFNCRRYKPRANTIAGLKEETRAQAIQEAEDLFA 174
            I+L AWSDSRR++ V+++ NGIT EFN R ++PR + I  L E  + +A++EAEDLFA
Sbjct:  203 IQLIAWSDSRRIIFVQKDANGITGEFNSRIFRPRDSIIQELSESVKKEAVKEAEDLFA 260          
BLAST of mRNA_C-tenellus_contig7275.1.1 vs. uniprot
Match: A0A8H4R4S2_9AGAR (Uncharacterized protein n=2 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4R4S2_9AGAR)

HSP 1 Score: 65.5 bits (158), Expect = 3.230e-11
Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = 1
Query:    1 IKLTAWSDSRRVVMVKRNKNGITREFNCRRYKPRANTIAGLKEETRAQAIQEAEDLFA 174
            I+L AWS S+RVVMV+ + NGIT E+  R ++PR + I GLK ET+A AI++AED+FA
Sbjct:  213 IQLHAWSQSKRVVMVQDDSNGITGEYFSRNFRPRKSVIDGLKPETQALAIKQAEDIFA 270          
BLAST of mRNA_C-tenellus_contig7275.1.1 vs. uniprot
Match: UPI0020083266 (uncharacterized protein n=1 Tax=Antrodia serialis TaxID=139415 RepID=UPI0020083266)

HSP 1 Score: 64.7 bits (156), Expect = 4.710e-11
Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = 1
Query:    1 IKLTAWSDSRRVVMVKRNKNGITREFNCRRYKPRANTIAGLKEETRAQAIQEAEDLF 171
            IKL AWS S R++MV+ ++NGIT EFN R ++PR   I GL E+T+ +AI+E E L+
Sbjct:  183 IKLVAWSQSERILMVQNDQNGITGEFNARNFRPRKEVIQGLTEKTKQKAIEETESLW 239          
BLAST of mRNA_C-tenellus_contig7275.1.1 vs. uniprot
Match: A0A4S9FHV5_AURPU (Uncharacterized protein n=2 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4S9FHV5_AURPU)

HSP 1 Score: 63.2 bits (152), Expect = 2.170e-10
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 1
Query:    1 IKLTAWSDSRRVVMVKRNKNGITREFNCRRYKPRANTIAGLKEETRAQAIQEAEDLF 171
            IKLTAWSDS+R++  + + NGIT EFN RR+KPR + I G+ ++ R  AI  A +LF
Sbjct:  205 IKLTAWSDSQRILFHQEDDNGITGEFNSRRFKPRESVIKGMSDKARGAAINAANNLF 261          
BLAST of mRNA_C-tenellus_contig7275.1.1 vs. uniprot
Match: A0A401GW53_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GW53_9APHY)

HSP 1 Score: 63.2 bits (152), Expect = 2.210e-10
Identity = 30/57 (52.63%), Postives = 43/57 (75.44%), Query Frame = 1
Query:    1 IKLTAWSDSRRVVMVKRNKNGITREFNCRRYKPRANTIAGLKEETRAQAIQEAEDLF 171
            IKLTAWS S RV  ++ ++NGIT E+N RR++PRA+ IA ++E+   +A +EAE LF
Sbjct:  207 IKLTAWSQSTRVAFIQGDENGITGEYNVRRFRPRASVIAEMREKVTKKAAKEAESLF 263          
BLAST of mRNA_C-tenellus_contig7275.1.1 vs. uniprot
Match: A0A0H2R6Q2_9AGAM (Uncharacterized protein n=1 Tax=Schizopora paradoxa TaxID=27342 RepID=A0A0H2R6Q2_9AGAM)

HSP 1 Score: 61.6 bits (148), Expect = 9.350e-10
Identity = 27/58 (46.55%), Postives = 45/58 (77.59%), Query Frame = 1
Query:    1 IKLTAWSDSRRVVMVKRNKNGITREFNCRRYKPRANTIAGLKEETRAQAIQEAEDLFA 174
            I+LTAWS+++ +V+V  + NGIT ++N + +KPR + IAG+K +TR +A+ EA+ +FA
Sbjct:  228 IQLTAWSETKHIVIVNEDSNGITGQYNMQLFKPREDIIAGIKAKTRKEALAEADAMFA 285          
BLAST of mRNA_C-tenellus_contig7275.1.1 vs. uniprot
Match: UPI001D036AD3 (uncharacterized protein n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D036AD3)

HSP 1 Score: 59.7 bits (143), Expect = 2.350e-9
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 1
Query:    1 IKLTAWSDSRRVVMVKRNKNGITREFNCRRYKPRANTIAGLKEETRAQAIQEAEDLF 171
            IKL AWSD  R++  + +KNGIT EFNCR ++PRA+ I GL +  R +AI  A  +F
Sbjct:  145 IKLVAWSDCSRILFHQADKNGITGEFNCRIFRPRASVIDGLTDAARRKAISAANAMF 201          
BLAST of mRNA_C-tenellus_contig7275.1.1 vs. uniprot
Match: A0A2R6WK78_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WK78_MARPO)

HSP 1 Score: 59.7 bits (143), Expect = 4.100e-9
Identity = 29/57 (50.88%), Postives = 42/57 (73.68%), Query Frame = 1
Query:    1 IKLTAWSDSRRVVMVKRNKNGITREFNCRRYKPRANTIAGLKEETRAQAIQEAEDLF 171
            IKLTAWSDS R++ ++ +KNGIT EFN + ++PR + I  L + TR +A++ AE LF
Sbjct:  204 IKLTAWSDSSRILFLQDDKNGITGEFNSKIFRPRESIIRELTKGTREEALRRAESLF 260          
BLAST of mRNA_C-tenellus_contig7275.1.1 vs. uniprot
Match: A0A2R6WAE8_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WAE8_MARPO)

HSP 1 Score: 57.8 bits (138), Expect = 2.100e-8
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 1
Query:    1 IKLTAWSDSRRVVMVKRNKNGITREFNCRRYKPRANTIAGLKEETRAQAIQEAEDLF 171
            IKLTAW+DS R++  + ++NGIT EFN R+++PR + +  L +ETR +A   AE LF
Sbjct:  205 IKLTAWADSSRILFHQEDRNGITGEFNSRKFRPRESIMRELTKETREKARLRAESLF 261          
BLAST of mRNA_C-tenellus_contig7275.1.1 vs. uniprot
Match: A0A2R6X9X0_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X9X0_MARPO)

HSP 1 Score: 57.8 bits (138), Expect = 2.100e-8
Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = 1
Query:    1 IKLTAWSDSRRVVMVKRNKNGITREFNCRRYKPRANTIAGLKEETRAQAIQEAEDLFA 174
            IKLTAWSDS R++  +++KNGIT EFN R+++PR + I  L       A++ AE LF+
Sbjct:  204 IKLTAWSDSSRILFHQQDKNGITGEFNSRKFRPREDVIRDLAPAIHDNAVKTAESLFS 261          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7275.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A8H6Z8U3_9AGAR2.130e-1153.45Uncharacterized protein n=1 Tax=Mycena sanguinolen... [more]
A0A8H4R4S2_9AGAR3.230e-1156.90Uncharacterized protein n=2 Tax=Agrocybe pediades ... [more]
UPI00200832664.710e-1152.63uncharacterized protein n=1 Tax=Antrodia serialis ... [more]
A0A4S9FHV5_AURPU2.170e-1052.63Uncharacterized protein n=2 Tax=Aureobasidium pull... [more]
A0A401GW53_9APHY2.210e-1052.63Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A0H2R6Q2_9AGAM9.350e-1046.55Uncharacterized protein n=1 Tax=Schizopora paradox... [more]
UPI001D036AD32.350e-950.88uncharacterized protein n=1 Tax=Hirsutella rhossil... [more]
A0A2R6WK78_MARPO4.100e-950.88Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A2R6WAE8_MARPO2.100e-849.12Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
A0A2R6X9X0_MARPO2.100e-848.28Uncharacterized protein n=2 Tax=Marchantia polymor... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7275contigC-tenellus_contig7275:4147..4323 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog5127.CCT69218
Model size177
Max annot lvl4751|Fungi
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue4.85e-09
EggNOG OGs2D030@1|root,2SCKW@2759|Eukaryota,3AKU3@33154|Opisthokonta,3PDPX@4751|Fungi,3R3T4@4890|Ascomycota
Cds size177
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790025.2815685-CDS-C-tenellus_contig7275:4146..43231680790025.2815685-CDS-C-tenellus_contig7275:4146..4323Choristocarpus tenellus KU2346CDSC-tenellus_contig7275 4147..4323 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7275.1.1prot_C-tenellus_contig7275.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7275 4147..4323 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7275.1.1

>prot_C-tenellus_contig7275.1.1 ID=prot_C-tenellus_contig7275.1.1|Name=mRNA_C-tenellus_contig7275.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=59bp
IKLTAWSDSRRVVMVKRNKNGITREFNCRRYKPRANTIAGLKEETRAQAI
QEAEDLFA*
back to top

mRNA from alignment at C-tenellus_contig7275:4147..4323-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7275.1.1 ID=mRNA_C-tenellus_contig7275.1.1|Name=mRNA_C-tenellus_contig7275.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=177bp|location=Sequence derived from alignment at C-tenellus_contig7275:4147..4323- (Choristocarpus tenellus KU2346)
ATCAAGCTCACGGCATGGTCTGATTCAAGACGCGTAGTGATGGTGAAGCG TAACAAGAATGGAATCACCAGAGAGTTCAACTGTAGGAGGTACAAGCCCC GCGCCAACACGATTGCTGGCTTGAAAGAAGAAACCCGCGCCCAGGCCATC CAGGAGGCGGAAGATCTCTTTGCTTGA
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig7275:4147..4323-

>mRNA_C-tenellus_contig7275.1.1 ID=mRNA_C-tenellus_contig7275.1.1|Name=mRNA_C-tenellus_contig7275.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=177bp|location=Sequence derived from alignment at C-tenellus_contig7275:4147..4323- (Choristocarpus tenellus KU2346)
ATCAAGCTCACGGCATGGTCTGATTCAAGACGCGTAGTGATGGTGAAGCG
TAACAAGAATGGAATCACCAGAGAGTTCAACTGTAGGAGGTACAAGCCCC
GCGCCAACACGATTGCTGGCTTGAAAGAAGAAACCCGCGCCCAGGCCATC
CAGGAGGCGGAAGATCTCTTTGCTTGA
back to top