mRNA_C-tenellus_contig7248.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7248.1.2 vs. uniprot
Match: D8LL92_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL92_ECTSI) HSP 1 Score: 225 bits (573), Expect = 9.700e-65 Identity = 117/253 (46.25%), Postives = 159/253 (62.85%), Query Frame = 2 Query: 230 EMLPIASVQRFPMWIVGETEK----GQKTLTGVPQSNDQVGWVDPLSFNELWIPSGSPTPQMTLSLGMLIKDGNPRYLMPAMDVSVSKGGHSWRNRGMNSFPVAHSWQHIGGTLGGQLTLSMYASRNVKEGVGSSMWYAIEEKRGIADAITAIVGALADPPEGVEIGEGFHFLVAQV--PGAVSSPTPV------NGQVRIFLTDFDSPSGLLEVEDSDG------AELSMSVVEVASAAESDYLPDVYKALY 934 + LP+AS FP+W + E+ G+K +T VP N ++GWV+P S++ELW+P GSP P M L LGML+KDG PRY+MP +D+ VSKGG WRNRG+NS PVAH+W+ + G + LS YA V+ SMW AI EK + DA T IV LADPPE ++IG GFH LVA+V PG+ + V G+VR+FL+D P+ LL++E+ A L VV VA+ ES++LP+VY+ + Sbjct: 74 QRLPVASASSFPLWFIDGDEQVDDAGRKHVTQVPGPNAELGWVNPRSYSELWVPEGSPAPAMKLCLGMLMKDGVPRYVMPMVDLVVSKGGRKWRNRGLNSVPVAHTWEPVERAAAGSVFLSAYAEERVEGSETDSMWGAIAEKLPVTDAFTDIVSVLADPPEELDIGSGFHVLVAEVAVPGSGPGGSSVVAAARDGGRVRVFLSDVSEPADLLDLEEMGKGGIRGVAALGFDVVSVANGGESEFLPEVYRPFF 326
BLAST of mRNA_C-tenellus_contig7248.1.2 vs. uniprot
Match: A0A6V1VC31_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VC31_HETAK) HSP 1 Score: 177 bits (448), Expect = 4.730e-47 Identity = 100/253 (39.53%), Postives = 150/253 (59.29%), Query Frame = 2 Query: 197 RVPVSLQGS-RSEMLPIASVQRFPMWIVGETEKGQKTLTGVPQSNDQVGWVDPLSFNELWIPSGSPTPQMTLSLGMLIKDGNPRYLMPAMDVSVSKGGHSWRNRGMNSFPVAHSWQHIGGTLGGQLTLSMYASRNVKEGVGSSMW--YAIEEKRGIADAITAIVGALADPPEGVEIGEGFHFLVAQVPGAVSSPTPVNGQ-VRIFLTDFDSPSGLLEVED---SDGAELSMSVVEVASAAESDYLPDVYKALY 934 R +S+ GS R E LP+ S +P+W++ E E G + P+ WVDP SF++LWIP SP P + +L +L+KDGNPRY++P +D + +GG WRNRGM +FP+AH WQ L +S+Y ++ + + + S W +A E+ G A+ A++ + + P EI GFHF+ A +P ++P P N Q +R+FL D + P LLE+ED + G L + V E+A A ES Y+PDVY+ L+ Sbjct: 47 RQSISILGSGRMETLPL-SYASYPVWMM-EPEGGLARVPDAPEEEGGAAWVDPFSFSDLWIPMDSPQPMLRPTLMVLLKDGNPRYVLPGLDTFLEQGGRRWRNRGMRTFPMAHVWQLFLAVPPEFLKISVYTNQKIPDTINDS-WEKFADCEELGAVGALDAVLALVGEGPP--EIKNGFHFVAAPLP-VPAAPIPQNCQRIRVFLNDIEDPIRLLELEDGAETGGGVLDVEVTEIAPAGESQYIPDVYRQLF 293
BLAST of mRNA_C-tenellus_contig7248.1.2 vs. uniprot
Match: A0A836CL77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL77_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.510e-44 Identity = 105/291 (36.08%), Postives = 149/291 (51.20%), Query Frame = 2 Query: 212 LQGSRSEMLPIASVQRFPMWIVG-ETEKGQKTLTGVP-QSNDQVGWVDPLSFNELWIPSGSPTPQMTLSLGMLIKDGNPRYLMPAMDVS-------------------------------VSKGGHSWRNRGMNSFPVAHSWQHIGGTLGGQLTLSMYASRNVKE----------------GVGSSMWYAIEEKRGIADAITAIVGALADPPEGVEIGEGFHFLVAQVPGAVSSPTPVNG-QVRIFLTDFDSPSGLLEVEDSDGAELSMSVVEVASAAESDYLPDVYKALY 934 LQG E LP V FP+W++ +T K L+ VP Q++ WV+P S LW+P GS P T+ + ML+KDG PRYL P +D V++GG +WRNRG+ S +AHSWQ L+LS Y V + G + W+A+ E + A+ ++G +ADPP E+ +G LVA V GA P P +G ++R+FL+D+ +P LLEVE + GA+L + V VASAA+S+YLPD+Y+ LY Sbjct: 8 LQGPVIEQLPAGLVTSFPIWMLDPDTSK----LSRVPDQADGSQSWVEPRSCAALWVPEGSTVPTATVGVAMLVKDGRPRYLFPHLDTVXXXXXXXXXXXXPRPSLXXXXXXXXXXXXXVVARGGRAWRNRGVASVALAHSWQQFAHVPVQDLSLSAYVGAPVPQEEGXXXXXXXXXXXXXGAKTDAWHAVAEGVEVEAAVLQLMGVIADPP--AELNDGISILVAPVKGAAPFPLPPDGSKIRVFLSDYPAPVRLLEVETTRGAQLEVRVERVASAAKSEYLPDIYRPLY 292
BLAST of mRNA_C-tenellus_contig7248.1.2 vs. uniprot
Match: A0A6U1NKJ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NKJ8_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.100e-39 Identity = 86/255 (33.73%), Postives = 141/255 (55.29%), Query Frame = 2 Query: 203 PVSLQGSRSEMLPIASVQRFPMWIVGETEKGQKT---LTGVPQSND---QVGWVDPLSFNELWIPSGSPTPQMTLSLGMLIKDGNPRYLMPAMDVSVSKGGHSWRNRGMNSFPVAHSWQHIGGTLG--GQLTLSMYASRNVKEGVGSS-MWYAIEEKRGIADAITAIVGALADPPEGVEIGEGFHFLVAQVPGAVSSPTPVNGQVRIFLTDFDSPSGLLEVED--SDGAELSMSVVEVASAAESDYLPDVYKALY 934 P ++ + +MLP+ +P+W + +T + L+ VP ++ + G+VDP S++ W+P SP + ++ ++KDG PRY+MP +D++ K G WRNRG+NS P+A W+ T +LTLS++A V+ G++ W I EK + D + +V +ADPPE EI GFH L+ + +R F+TD+ P +LE+ SDG+EL + + ++ SA +S++LP VY LY Sbjct: 58 PSMIKITGGDMLPVGYTSTWPVWALEDTPSDGSSNCRLSAVPGTSSGEGETGFVDPRSYHLFWVPEDSPPLLLRPAVVAVLKDGKPRYIMPGLDITAEKAGQVWRNRGLNSLPLAGQWESFLDTALDLSKLTLSVFARHPVEGEEGNTNAWTTIAEKVNLLDTLDRLVAIMADPPE--EISSGFHVLIMPIADTTLQVPSGTNNMRAFITDYPDPKRMLELPSMGSDGSELDIQIEKILSAGKSEFLPQVYAPLY 310
BLAST of mRNA_C-tenellus_contig7248.1.2 vs. uniprot
Match: A0A7S2MPJ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MPJ3_9STRA) HSP 1 Score: 135 bits (340), Expect = 6.500e-32 Identity = 87/251 (34.66%), Postives = 135/251 (53.78%), Query Frame = 2 Query: 212 LQGSRSEMLPIASVQRFPMWIVGETEKGQKTLTGVPQSNDQVGWVDPLSFNELWIPSG-SPTPQMTLSLGMLIKDGNPRYLMPAMDVSVSK-GGHSWRNRGMNSFPVAHSWQHIGGTLGGQLTLSMYASRNVK-----EGVGSSMWYAIEEKRGIADAITAIVGALADPPEGVEIGEGFHFLVAQVPGAVSSPTPVNGQ-VRIFLTDFDSPSGLLEVED--SDGAELSMSVVEVASAAESDYLPDVYKALY 934 L+G +E LP + V P+ +VG L + S + GW +P S+++LWI G +PTP LS+ L+KDG+ R L P +DV+ ++ GH WRN G+ S+P++ W L +S Y V E + W + EK I DAI ++ ADPP+ ++ GFH + + G P P +G+ +R++++D+ PS LLE+ + S A L + +VAS AES++LP VY+ LY Sbjct: 56 LKGVDTEHLPTSFVAAIPISVVG----ADSALYRISDSESE-GWCNPRSWSQLWISDGLNPTPSACLSVQALLKDGSLRCLFPGLDVTCTRPDGHVWRNLGLKSYPMSQVWLDYSTIPLASLRVSAYCRPVVTLDSDDEPINDRDWVTLTEKLDIQDAIMKVIELAADPPKELQ---GFHVVSVPIEGG-EVPVPSDGEALRVYMSDYPDPSKLLELPNVASGSAVLEVIAADVASGAESEFLPGVYRGLY 297
BLAST of mRNA_C-tenellus_contig7248.1.2 vs. uniprot
Match: A0A8J5XAL8_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XAL8_DIALT) HSP 1 Score: 124 bits (312), Expect = 3.470e-28 Identity = 82/267 (30.71%), Postives = 134/267 (50.19%), Query Frame = 2 Query: 206 VSLQGSR--SEMLPIASVQRFPMWIVGETEKGQKTLTGVPQSND----QVGWVDPLSFNELWIPSGSPTPQMTLSLGMLIKDGNPRYLMPAMDVSVSKGGHSWRNRGMNSFPVAHSWQHIGGTLGGQLTLSMYASRNVK-----EGVGSSMWYAIEEKRGIADAITAIVGALADPPEGVEIGEGFHFLVAQVP----GAVSSPTPVNG-QVRIFLTDFDS-PSGLLEVEDS---DGAELSMSVVEVASAAESDYLPDVYKALYHDDQ 946 VS+ G +E LP++ Q +P+W G+ + V S D + WVDPL+F ++W+P P P L+L +++KDG PRY+ P +D +V+ G WRNRG+ S P+A +W T Q+ LS Y +G + + + A LAD P E+ GF +L ++P ++S V G ++R+FL+D +S P+ L +DS + E + +++V+ S YLPDVY+ L+ + + Sbjct: 13 VSIAGGSLMAEKLPLSYCQSWPLWCTSAVGDGRLAMRRVNPSADGDDERGSWVDPLTFEDMWLPEDLPFPSFHLALTLVLKDGTPRYVAPGLDSTVASAGREWRNRGLCSVPMAKTWLPWRHTPIAQMRLSAYVQPPTPPDAPADGSDGARCQPLAVLVPVEKAFEMAAEVLADAPS--ELANGFSYLTVRLPLDDESLLASAALVPGARLRVFLSDAESFPTALGSSDDSWAWERGECDVRLMQVSPGGTSAYLPDVYRPLFENQK 277
BLAST of mRNA_C-tenellus_contig7248.1.2 vs. uniprot
Match: A0A0M0JBK6_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JBK6_9EUKA) HSP 1 Score: 119 bits (298), Expect = 7.460e-27 Identity = 75/230 (32.61%), Postives = 121/230 (52.61%), Query Frame = 2 Query: 326 NDQVGWVDPLSFNELWIPSGSPTPQMTLSLGMLIKDGNPRYLMPAMDVSV-SKGGHS-WRNRGMNSFPVAHSWQHIGGTLGGQLTLSMYA--------SRNVKEG--------VGSSMWYAIEEKRGIADAITAIVGALADPPEGVEIGEGFHFLVAQVPGAVSSPTPV---NGQVRIFLTDFDSPSGL-LEVEDSDG-----AELSMSVVEVASAAESDYLPDVYKALY 934 +++ GWV+PL+F +LW+P G P+ +LG ++K+G PR+L P +V S GG W NRG+NS P+A +W G L LS Y S+ + G + S+W + +ADA I+ +A P+ +GEGF +L+ + ++ P ++R+FL+D D+ G L ++D +G AE +S+ E S ESD++P+VYK L+ Sbjct: 4 DEKGGWVNPLTFEQLWLPQGLAMPKSRAALGAVLKNGVPRFLFPTTATTVGSDGGRRLWYNRGVNSLPLAKTWLTFGDIPINDLRLSAYTQLLPKTFGSKEAEVGSDEAVDLAIRRSVWKPVLPLISVADAFNTILEVMASAPDA--LGEGFCYLIVPLSEEIALPEEAIQPGNRLRLFLSDVDATEGKPLNLDDREGWKWTHAECDLSMFETESGRESDFMPEVYKPLF 231
BLAST of mRNA_C-tenellus_contig7248.1.2 vs. uniprot
Match: A0A7S0XQA7_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XQA7_HEMAN) HSP 1 Score: 112 bits (280), Expect = 5.650e-25 Identity = 69/175 (39.43%), Postives = 93/175 (53.14%), Query Frame = 2 Query: 332 QVGWVDPLSFNELWIPSGSPTPQMTLSLGMLIKDGNPRYLMPAMDVSVSKGGHSWRNRGMNSFPVAHSWQHIGGTLGGQLTLSMYASRNVKEGVGSSMWYAIE------------EKRGIA---DAITAIVGALADPPEGVEIGEGFHFLVAQVPGAVSSPTPVNG-QVRIFLTD 808 Q GWVDP+S+ ELW+P P P M ++ +++DG RYLMP +DVS+ GG W NRGM SFP+A W +G +L L+ Y+ KE S++ E EK A DAIT++V LAD G EIG GFH +V G P G ++++ LTD Sbjct: 1 QGGWVDPISWGELWLPEDLPLPVMRPAVAAIVRDGVVRYLMPGLDVSIQAGGKLWWNRGMCSFPLASKWADVGACDLARLRLAAYSQSGYKEAEKSTITMKEEGEPEEEDEVTAWEKLWQAPASDAITSLVMLLADEG-GSEIGHGFHIVVVPAEGEQLRQAPDAGTRLKVLLTD 174
BLAST of mRNA_C-tenellus_contig7248.1.2 vs. uniprot
Match: L1JUM1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JUM1_GUITC) HSP 1 Score: 106 bits (265), Expect = 2.650e-22 Identity = 73/246 (29.67%), Postives = 118/246 (47.97%), Query Frame = 2 Query: 254 QRFPMWIVGETEKGQKTLTGVPQSNDQVGWVDPLSFNELWIPSGSPTPQMTLSLGMLIKDGNPRYLMPAMDVSVSKGGHSWRNRGMNSFPVAHSWQHIGGTLGGQLTLSMY-------ASRNVKE----------GVGSSMWYAIEEKRGIADAITAIVGALADPPEGVEIGEGFHFLVAQVPGAVSSPTPVNG-QVRIFLTDFDSPSGLLEVEDSDGAELSMSVVEVASAAESDYLPDVYKALYH 937 + F WI+ E E + + GWVDP SF+E W+P+ P P M ++G L KDG +YLMPA+D+ V GG W NRG+NS P+A W + ++++ + A R VKE G +W A K I +V L+D +G + +G+H +V +P P G ++R+ L+ + L + ++ +EL++ ES+++P VYK L++ Sbjct: 3 ESFQKWILSEDEL--RPFFNSASYGKESGWVDPFSFDEAWLPTDLPLPLMRPAIGALTKDGQVKYLMPALDMCVQAGGKLWWNRGINSVPLAKRWLDVNCADLSRMSIQAFCQGGYEDAKRAVKELGDDHPDNELGPWKKLWEAPAAK-----GIVELVETLSDD-KGACVEKGYHIIVIPLPEEPLREAPDAGNRLRLCLSAAGAIDPLQDGIETTYSELNVLFRATMPGNESEHMPQVYKELFN 240
BLAST of mRNA_C-tenellus_contig7248.1.2 vs. uniprot
Match: A0A7S0ERZ3_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ERZ3_9EUKA) HSP 1 Score: 105 bits (263), Expect = 2.360e-21 Identity = 86/296 (29.05%), Postives = 138/296 (46.62%), Query Frame = 2 Query: 209 SLQGSRSEMLPIASVQRFPMWIVGETEKGQKTLTGVPQSNDQVGWVDPLSFNELWIPSGSPTPQMTLSLGMLIKDGNPRYLMPAMDVSVSK----GGHSWRNRGMNSFPVAHSWQHIGGTLGGQLTLSMY-----------------------ASRNVKEGVGSSMWYAIEEK------------------RGIADAITAIVGALADPPEGV-EIGEGFHFLVAQVPG-AVSSPTPVNGQ-VRIFL-TDFDSPSGLLEVEDSDGAELSMS-----VVEVASAAESDYLPDVYKALY 934 S++G S LP+A R+P+WI + L+G ++ GWVDP+SF +LW+P P P L++ ++IKDG PRYL+P ++ S++ G W NRG+NS P+ W G+ L Y A +EG A EE + + +A+ +I+ LA+ + E+GEG+HF+ A+V G A+ + T G+ +R+ L T D P+ E+ +G LS + V + + ES+++P+ YK LY Sbjct: 27 SIKGG-SGQLPLAMC-RWPLWIASADHVTK--LSGAGGDEEEAGWVDPISFEQLWLPEDLPLPSSHLAVSLVIKDGVPRYLLPCIETSITTVSGVSGTVWHNRGLNSVPLGAQWM-----AWGEAPLKAYRLFSFGSDFKPPAPPPARRHPRGARAAAEEGAAEEADTAEEELPPAWEPLQVMADRPGGGGQPVEEALGSIMRVLAEAGAEIKEMGEGYHFITARVDGGALPADTVRPGRKLRLILATALDDPNP--NDEEWEGEMLSFARCDTTVYSIPAGGESEFMPECYKPLY 311 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7248.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7248.1.2 >prot_C-tenellus_contig7248.1.2 ID=prot_C-tenellus_contig7248.1.2|Name=mRNA_C-tenellus_contig7248.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=239bp MLPIASVQRFPMWIVGETEKGQKTLTGVPQSNDQVGWVDPLSFNELWIPSback to top mRNA from alignment at C-tenellus_contig7248:1302..4317- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7248.1.2 ID=mRNA_C-tenellus_contig7248.1.2|Name=mRNA_C-tenellus_contig7248.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3016bp|location=Sequence derived from alignment at C-tenellus_contig7248:1302..4317- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7248:1302..4317- >mRNA_C-tenellus_contig7248.1.2 ID=mRNA_C-tenellus_contig7248.1.2|Name=mRNA_C-tenellus_contig7248.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=717bp|location=Sequence derived from alignment at C-tenellus_contig7248:1302..4317- (Choristocarpus tenellus KU2346)back to top |