mRNA_C-tenellus_contig714.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig714.2.1 vs. uniprot
Match: D7FSH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH1_ECTSI) HSP 1 Score: 323 bits (828), Expect = 1.610e-100 Identity = 169/304 (55.59%), Postives = 219/304 (72.04%), Query Frame = 1 Query: 244 LYMKEKSSSDAEKEFCDGRLNDLITIQAQLTATHYWMELRGNMYAEWMSRYNKEVGGVQALGWKSFLGGMLRAPPEEIVVKKLIKKPRGGSGTNPFLKDRE-FSYTEIIYPAKIAQQIMSIREQLAEHLGKDLELVVQENAELKRHYNDELELGADKALRLRMTNWTVRQERDPSSGISNPPRRVAAYDKAVELITASSVRRLQKQLQVHGDRHTLSWLEKLCNEELEKRQGNELIKAILEGPIVLVNKPGRDT-KIIEPLKVAQAIMQFREEVAEECIEVLASVPQDHNQLTVSLLNEQWKMT 1149 L+M + +DAE EF RL DLIT A LTA YWMELRGNMY EW++RY +E GGV+ +GW +F GMLRAPPE++VVKKLIK PRGGSG NPFL DR+ Y E I P IA+++M IREQ+AE LG DL+ + ENA L+ Y+ E ELG D+A LR+++ + DPSSG NPPRR + Y A+EL+TA+S+RR++ +L++ GD TL WL++ + ELE+R GN L++++ GP+VL+ P RD K++EPLKVAQ IMQ RE VAEE I VL VPQDH +TVSLLNE+W+ T Sbjct: 61 LHMNQSYKNDAEAEFYAKRLLDLITHNALLTANTYWMELRGNMYIEWLNRYIEERGGVEDVGWHAFFAGMLRAPPEDVVVKKLIKSPRGGSGNNPFLADRKPVEYNETIEPTTIARRLMEIREQVAEQLGSDLQQISAENARLQADYHYESELGPDRAQALRLSSLKPMTDVDPSSGTGNPPRRRSTYKDALELVTAASMRRVKAELRIRGDMVTLDWLDRFSSRELEQR-GNALLESLFAGPMVLIKDPLRDRPKVVEPLKVAQEIMQGREVVAEELITVLKGVPQDHLAMTVSLLNEKWEST 363
BLAST of mRNA_C-tenellus_contig714.2.1 vs. uniprot
Match: A0A835Z7Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q1_9STRA) HSP 1 Score: 214 bits (546), Expect = 6.410e-60 Identity = 125/316 (39.56%), Postives = 192/316 (60.76%), Query Frame = 1 Query: 274 AEKEFCDGRLNDLITIQAQLTATHYWMELRGNMYAEWMSRYNKEVGG---VQALGWKSFLGGMLRAPPEEIVVKKLIKKPRGGSGTNPFLKDREF-SYTEIIYPAKIAQQIMSIREQLAEHLGKDLELVVQENAE-----------LKRHYNDELELGADKALRLRMTNWTVRQERDPSSGISNPPRRVAAYDKAVELITASSVRRLQKQLQVHGDRHTLSWLEKLCNEELEKRQGNELIKAILEGPIVLVNKPGRDT---KIIEPLKVAQ----------AIMQFREEVAEECIEVLASVPQDHNQLTVSLLNEQ 1137 AE + RL +++T ++ TA +YW+ELRGNMY+E+M+R+ + GG V A GW++FL +L +PPEE++++K++KKPRGGSGTNP+L R+ SYTE+I P + ++I+ IR QLA L DLEL+ EN +++ Y DEL G +A RLR+ W + D + ++ P R + Y + L+T S+ R +K+L++ GD+HTL+WL+K+ + L GN+LI+A+L GP+VL+N G+D K+++PL+VA +M R V E +LA VPQ+H L +L Q Sbjct: 3 AEAADAERRLKNVLTEKSLQTAMYYWLELRGNMYSEYMARFTEGEGGGGSVVARGWRTFLSNLLSSPPEEVIIEKVVKKPRGGSGTNPYLAARKVVSYTEVIEPMTLGRRILDIRAQLAAELFHDLELIESENERXXXXXXXXXXXVQQFYQDELRYGIKEATRLRLRTWQPVVDTDAINS-TDTPYRSSLYLAVLALVTKVSLERYKKELRIVGDKHTLAWLDKIGDANLTL-SGNDLIEAMLNGPMVLIND-GKDRARPKVVQPLRVAADXXXXXXXXXXVMALRVSVVREFKGLLAGVPQEHQALIQGVLERQ 315
BLAST of mRNA_C-tenellus_contig714.2.1 vs. uniprot
Match: A0A836CAL6_9STRA (Alpha-type protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL6_9STRA) HSP 1 Score: 203 bits (517), Expect = 2.510e-52 Identity = 110/298 (36.91%), Postives = 175/298 (58.72%), Query Frame = 1 Query: 262 SSSDAEKEFCDGRLNDLITIQAQLTATHYWMELRGNMYAEWMSRYNKEVGGVQALGWKSFLGGMLRAPPEEIVVKKLIKKPRGGSGTNPFLKDR--EFSYTEIIYPAKIAQQIMSIREQLAEHLGKDLELVVQENAELKRHYNDELELGADKALRLRMTNWTVRQERDPSSGISNPPRRVAAYDKAVELITASSVRRLQKQLQVHGDRHTLSWLEKLCNEELEKRQGNELIKAILEGPIVLVNKPGRDT----KIIEPLKVAQAIMQFREEVAEECIEVLASVPQDHNQLTVSLLNEQ 1137 S SDAE + L +L+ ++A T HYW+E R + W+ + + V +GW FL ++R+ PE I VKK ++PRGGSG NPFL D + YT ++ P +IA++IM +REQLA+ +DL+L+ QEN EL RH++D L + AD+A R R + DP + P Y + +EL+T ++RR + +L++ G R+ +WLE+ + + GN+L++A+LEGP++++N + K+I PL++AQ +M+ R A E +L S+P DH QL + L +Q Sbjct: 398 SESDAEAAYMGQSLRNLLAVRASATVQHYWLEFRDELQPTWLKEFEEADHNVGEVGWDGFLTALMRSEPESITVKKKAQRPRGGSGNNPFLSDNRTQIEYTVVVKPYEIAKKIMKVREQLAQEWMRDLQLMDQENHELLRHHDDLLVMNADEADRARQLFFY----NDPWGTNAKSPLHQQNYRELIELVTKVALRRYETELRMTGQRYHANWLERFLVKAGDNLVGNDLMEAMLEGPMMMINPKVSGSADKPKMINPLQIAQGVMKRRVAAAAEFRSMLTSIPDDHAQLMRTFLEQQ 691
BLAST of mRNA_C-tenellus_contig714.2.1 vs. uniprot
Match: D8LEG6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEG6_ECTSI) HSP 1 Score: 184 bits (468), Expect = 6.220e-48 Identity = 99/286 (34.62%), Postives = 173/286 (60.49%), Query Frame = 1 Query: 307 DLITIQAQLTATHYWMELRGNMYAEWMSRYNKEVGGVQALGWKSFLGGMLRAPPEEIVVKKLIKKPRGGSGTNPFLKDR--EFSYTEIIYPAKIAQQIMSIREQLAEHLGKDLELVVQENAELKRHYNDELELGADKALRLRMTNWTVRQERDPSSGISNPPRRVAAYDKAVELITASSVRRLQKQLQVHGDRHTLSWLEKLCN----EELEKRQGNELIKAILEGPIVLVNKPGRD-TKIIEPLKVAQAIMQFREEVAEECIEVLASVPQDHNQLTVSLLNEQWK 1143 ++++ + + +YW+E R ++ +WM ++ G +Q +GW LG +LRA PEE+VV++L ++P+GGSG NP+LK + Y +I P KIA ++M +REQ++ +DL L+ EN+E++RH D L L ++ R R + + DP + S+P R Y +++IT ++VR + +L+V GDR+TL+WLEK + E+ +GN+L++AI++GPIV++ P + ++I+P + +M FR+ A+ E + S+P DH +L L E+ + Sbjct: 95 NMLSESSVASVVYYWLEFRDDLTPQWMKQFTYRNGDIQDIGWHQHLGLLLRAEPEEMVVRRLSQRPQGGSGNNPYLKANRTQMEYNVLIEPQKIASKVMQVREQISREWIQDLSLISAENSEVERHREDSLCLDSESKKRDRKLVF----DHDPLNNTSSPYRG-KNYKLLLDMITKAAVRAYRSELRVSGDRYTLNWLEKFMHRNDMEDGPNLKGNDLVEAIIDGPIVVIKDPRTEKNRVIDPGHIGGQLMNFRQLEAQLVTEAMESIPSDHVELKRQFLEERMR 375
BLAST of mRNA_C-tenellus_contig714.2.1 vs. uniprot
Match: A0A835YQU4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU4_9STRA) HSP 1 Score: 181 bits (459), Expect = 8.950e-47 Identity = 110/344 (31.98%), Postives = 178/344 (51.74%), Query Frame = 1 Query: 259 KSSSDAEKEFCDGRLNDLITIQAQLTATHYWMELRGNMYAEWMSRYNKEVGGVQALGWKSFLGGMLRAPPEEIVVKKLIKKPRGGSGTNPFLKDREFS--YTEIIYPAKIAQQIMSIREQLAEHLGKDLELVVQENAELKRHYNDELELGADKALRLRMTNWTVRQERDPSS----------------GISNPPR-------------------------RVAAYDKAVELITASSVRRLQKQLQVHGDRHTLSWLEKLCNEELEKRQGNELIKAILEGPIVLVNKPGRDT----KIIEPLKVAQAIMQFREEVAEECIEVLASVPQDHNQLTVSLLNEQWKMT 1149 +S SDAE + + +L+ +QA + +YWME R + W+ + + V +GW FLG ++R PEE+ V+K+ ++P+GGSG NPFL D + YT +I P +IA++IM++REQLA+ KDLELV ENAEL RH+ D L + A +A R + + DP + G P R + + ++T +VRR + +L+ G R+ +WLE+ + + +GN L++++L GP++++N R ++IEP ++A+ +M R AEE +L +VP DH +L S+L +QW T Sbjct: 51 ESESDAEAAHMERSVKNLLAVQASASVQYYWMEFRDELQPRWLKEFEEAGHNVGQVGWDHFLGSLMRTEPEEVTVRKMAQRPKGGSGNNPFLSDTRHAMEYTVLIEPFQIAKRIMTVREQLAQEWIKDLELVETENAELLRHHVDTLSMDAKQADSSRQLVF----DHDPCAVEGEVLXXXXXXXXXYGTKLPYRGKNYRADSSRXXXXXXXXXXXXXXXXXXXXXELLAMVTRVAVRRYEAELRQSGHRYHQNWLERFMLKGGKGLKGNALLESMLNGPMMMINPKVRGNSDKPRVIEPAQIAKGVMLRRATAAEEIRTILGTVPGDHLRLKASMLEQQWSAT 390
BLAST of mRNA_C-tenellus_contig714.2.1 vs. uniprot
Match: A0A7S2XZC6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZC6_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.430e-31 Identity = 93/326 (28.53%), Postives = 176/326 (53.99%), Query Frame = 1 Query: 190 SIISVHSLQSRVHHRPRVLYMKEKSSSDAEKEFCDGRLN-----DLITIQAQLTATHYWMELRGNMYAEWMSRYNKEVGGVQALGWKSFLGGMLRAPPEEIVVKKLIKKPRGGSGTNPFLKDRE-FSYTEIIYPAKIAQQIMSIREQLAEHLGKDLELVVQENAELKRHYNDELELGADKALRLRMTNWTVRQERDPSSGISNPPRRVAAYDKAVELITASSVRRLQKQLQVHGDRHTLSWLEKLCNEELEKRQGNELIKAILEGPIVLVNKPGRDT-KIIEPLKVAQAIMQFREEVAEECIEVLASVPQDHNQLTVSLLNEQWKM 1146 S+++ SL V +RP L M S+ +++ D + N +T QA + Y E R ++ +W+ +Y++E+ + +L ++ PE++ V++++++ GGSGTNP+LK+ F YT I P IAQ+++ IR Q+A + +DL+LV E+ E+ RH +D + G ++A T V DP S + P R Y ++ IT ++ R + + ++ ++WLE + + + + G L++ I++G + + ++ G K+I+P+ +AQ IM +REE AEE + L + ++ +++++LL KM Sbjct: 59 SLVATSSL---VENRP-GLSMSANSNKKPNRDYGDSKRNFAALKKTLTQQAVRSCVFYMNEFRDDVTVQWLKKYDEEMKRATST---EYLKTLMTKEPEQVKVQRIMRRAMGGSGTNPYLKNSSSFEYTVDINPKDIAQRLLKIRAQIATEMIQDLKLVRVEDEEVVRHRSDVVNFGEEEA---EGTRRAVHDFTDPFS--DSTPYRFETYTILMDKITDIALNRFKSEARILNRSKDINWLEDILKKNGDLKNG-ALLEKIMDGKMSITSRSGSSKPKVIDPMGIAQEIMSYREEAAEELSKSLEGIQGENARISLTLLENSLKM 371
BLAST of mRNA_C-tenellus_contig714.2.1 vs. uniprot
Match: A0A7S1TX02_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX02_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.760e-28 Identity = 87/293 (29.69%), Postives = 145/293 (49.49%), Query Frame = 1 Query: 292 DGRLNDLITIQAQLTATHYWMELRGNMYAEWMSRYNKEVGGVQALGWKSFLGGMLRAPPEEIVVKKLIKKPRGGSGTNPFLKDR--EFSYTEIIYPAKIAQQIMSIREQLAEHLGKDLELVVQENAELKRHYNDELELGADKALRLRMTNWTVRQERDPSSGISNPPRRVAAYDKAVELITASSVRRLQKQLQVHGDRHTLSWLEKLCNEELEKR-------QGNELIKAILEGPIVLVNKPGRDTKIIEPLKVAQAIMQFREEVAEECIEVLASVPQDHNQLTVSLLNEQWK 1143 D + D++T++A +Y +E +W+ + KE V+ LG F+ +L+ PEE+ +KK+ + PRGGSG NP+LKD+ YT +I P IA++IM++R Q+A+ DL + +NAE+ R Y ++ + + R + V DP S+P R Y ++ +V + L+ +WLE + EK QG+E+I+ +LE V++ + IEP KVA +M+ R E A+ IE + V DH ++ L Q++ Sbjct: 46 DHFIKDVLTVRAAQAVNYYSIEFHDETKVKWLDEFMKETD-VRELGSTQFIYRLLKTEPEEVNIKKMRQMPRGGSGNNPYLKDKGVAIEYTVLIDPMSIARKIMTVRAQIAKEWMHDLSTIEADNAEISRFYAEKQKESRGEG---RAVHHMVYDADDPFVTDSSPYRS-KNYADLKRVLAKDAVTSAIEHLRELRQTPVATWLESFAQKFAEKHEKDSDSLQGHEIIQELLESNYVMLPSRNGKLRAIEPDKVAMLVMKHRAEHAKAWIEACSEVESDHTKINAMNLEFQYR 333
BLAST of mRNA_C-tenellus_contig714.2.1 vs. uniprot
Match: A0A7S1TYK2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYK2_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 8.050e-19 Identity = 48/132 (36.36%), Postives = 78/132 (59.09%), Query Frame = 1 Query: 292 DGRLNDLITIQAQLTATHYWMELRGNMYAEWMSRYNKEVGGVQALGWKSFLGGMLRAPPEEIVVKKLIKKPRGGSGTNPFLKDR--EFSYTEIIYPAKIAQQIMSIREQLAEHLGKDLELVVQENAELKRHY 681 D + D++T++A +Y +E +W+ + KE V+ LG F+ +L+ PEE+ +KK+ + PRGGSG NP+LKD+ YT +I P IA++IM++R Q+A+ DL + +NAE+ R Y Sbjct: 46 DHFIKDVLTVRAAQAVNYYSIEFHDETKVKWLDEFMKETD-VRELGSTQFIYRLLKTEPEEVNIKKMRQMPRGGSGNNPYLKDKGVAIEYTVLIDPMSIARKIMTVRAQIAKEWMHDLSTIEADNAEISRFY 176
BLAST of mRNA_C-tenellus_contig714.2.1 vs. uniprot
Match: A0A7S4QKE4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QKE4_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 8.250e-5 Identity = 67/250 (26.80%), Postives = 113/250 (45.20%), Query Frame = 1 Query: 430 WKSFLGGMLRAPPEEIVVKKLIKKPRGGSGTNPFLKDREFSYTEIIYPAKIAQQIMSIREQLAEHLGKDLELVVQENAE--LKRHYNDELELGADKAL-------RLRMTNWT-VRQERDPSSGISNPPRRVAAYDKAVELITASSVRRLQKQLQVHGDRHTLSWLEKLCNEELEKR--------QGNELIKAILEGP---IVLVNKPGRDTKIIEPLKVAQAIMQFREEVAEECIEVLASVP-QDHNQL 1113 W+S+ +L P E +++ GG L+ R++ I PA I +++SIREQ+AE DL ++ + + +Y+ ++G K RL N + DP G + P R +D AV L T S+ RL + D H +L E LE + ++ ++ +L GP + +V G T +++P++VA+ I+Q R EVA E ++P +DH Q+ Sbjct: 161 WESYFAILLEQPTEHFLIQS------GG------LQMRDYELD--INPASICTRLISIREQIAEEFANDLGVLAHTMGQHTMDSYYDLMEDIGLQKTKDRNNNGRRLPPHNLVFLGYALDPIDGFAPSPLRQHNFDLAVLLATQESIHRLLNKHCNDNDPHR-QYLLDFYVERLESHFTGTQRYGRADDFLEELLFGPPRQVSVVQGEGT-TVVVDPVRVAEWILQERREVALEWQSACKNIPSKDHIQI 394 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig714.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig714.2.1 >prot_C-tenellus_contig714.2.1 ID=prot_C-tenellus_contig714.2.1|Name=mRNA_C-tenellus_contig714.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=381bp MVKGIAPSVLEPRDRERRWWSLTAIFLLLARSSYVVSFRCHPCQRRSSIIback to top mRNA from alignment at C-tenellus_contig714:3245..6738+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig714.2.1 ID=mRNA_C-tenellus_contig714.2.1|Name=mRNA_C-tenellus_contig714.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3494bp|location=Sequence derived from alignment at C-tenellus_contig714:3245..6738+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig714:3245..6738+ >mRNA_C-tenellus_contig714.2.1 ID=mRNA_C-tenellus_contig714.2.1|Name=mRNA_C-tenellus_contig714.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1143bp|location=Sequence derived from alignment at C-tenellus_contig714:3245..6738+ (Choristocarpus tenellus KU2346)back to top |