mRNA_C-tenellus_contig714.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig714.1.1
Unique NamemRNA_C-tenellus_contig714.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig714.1.1 vs. uniprot
Match: D7FSH0_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH0_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 4.220e-146
Identity = 246/383 (64.23%), Postives = 284/383 (74.15%), Query Frame = 1
Query:    1 GSRPMEEVAKEWGLDARLAQTLREEGVKHFFPIQVRVVPEIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVLLPSRDLAMQVHKVFQRYAERTGLRVGLAIGQTNFLEEQLSLVGRFALAGNPVAAARACSLRGTGAVSWQGPSLTGNS--------TSVPSGGASEVDIVVATPGRLMDHLSQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLAASYRREPGSVSRVV-----NGDLQLFSTPALALAHSD-----AKTEDTHKTASPRSN--------------------KPSPFQFPSGIQLEPVTIRGRPLATGARVRGPTVSTPPLRKMLFSATLTSNPQKLAGLGVLNPVMFSARE 1035
            G RPMEEVA+EWGLD RL + LR EGVKHFFPIQVRVVP+IVATERHSHVQSRDICVSAPTGSGKTLV+VLGVLQAL+RRRVVRLRALVLLPSRDLAMQVH VF++YA  TGLRVGLAIGQTNFLEEQL+LVG  ALAGNP A ARA  LR  G      P++ G++        T  P+GG+SEVDIVVATPGRL+DHL+QTPGFTLQHLRYL+IDEADRLLNQSYQGWVGKV+ A+YR+EPG+ + V      NG  +       A A  D      + +D  K     +N                    +P   + PS   L+PVT+RGRPLATG R+RG TVSTPPLRK+LFSATLT+NPQKLAGL V+NP++++A E
Sbjct:  170 GPRPMEEVAEEWGLDPRLTEILRREGVKHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHSVFKKYARGTGLRVGLAIGQTNFLEEQLALVGPVALAGNPTATARASFLRAQGRAIRPNPTMGGSNLDSGGWSGTGAPAGGSSEVDIVVATPGRLLDHLTQTPGFTLQHLRYLIIDEADRLLNQSYQGWVGKVIKAAYRKEPGTAAPVYERFTFNGGGKRNDVSGGAGAEDDDSRGQQQPQDVEKAQECDNNGSNSVSSQQQLGVTGVGKRPRPPSRRPPSAFSLDPVTVRGRPLATGERIRGATVSTPPLRKLLFSATLTNNPQKLAGLDVVNPLIYTATE 552          
BLAST of mRNA_C-tenellus_contig714.1.1 vs. uniprot
Match: A0A835YS10_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS10_9STRA)

HSP 1 Score: 356 bits (914), Expect = 4.390e-114
Identity = 210/370 (56.76%), Postives = 244/370 (65.95%), Query Frame = 1
Query:    4 SRPMEEVAKEWGLDARLAQTLREEGVKHFFPIQVRVVP----------EIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVLLPSRDLAMQVHKVFQRYAERTGLRVGLAIGQTNFLEEQLSLVGRFALAGNPVAAARACSLRGTGAVSWQ--GPSLTGNSTSVPSGGASEVDIVVATPGRLMDHLSQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLAASYRREPGSVSRVVNGDLQLFSTPALALAHSDAKTEDTHKTASPRSNKPSPFQFPSGIQ--------------LEPVTIRGRPLATGARVRGPTVSTPPLRKMLFSATLTSNPQKLAGLGVLNPVMFSARE 1035
            SRP+EEVA+EWGLD RL +TLR +GV HFFPIQV VVP          +I+AT RHSHVQ+RD+CV APTGSGKTLVYVLGV+QAL+ RRV RLRAL LLPSRDLA QVH VF  Y   TGLRVGLAIGQ+N L+EQLSLVG  AL+ +PVAAARA     +G +     G    G S +VP GG SEVDI+VATPGRL+DHL QTPGFTLQHL YLV+DEADRLLNQSYQ WVG+VL A+YR   GSV+          S P++A                                              ++P T+RGRP A   RV GP  +T PLRK+LFSATLT+NPQKLA LG+ NPV ++ARE
Sbjct:   31 SRPVEEVAEEWGLDPRLRRTLRTQGVTHFFPIQVSVVPNITAMVSVVPDIMATARHSHVQARDVCVGAPTGSGKTLVYVLGVVQALLPRRVRRLRALALLPSRDLATQVHGVFTTYCTGTGLRVGLAIGQSNLLDEQLSLVGTTALSNSPVAAARAWVGGKSGGLRAPPAGAFARGMSAAVPLGGVSEVDILVATPGRLLDHLEQTPGFTLQHLMYLVVDEADRLLNQSYQDWVGRVLEAAYRAREGSVT--CGSSSSPISNPSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQPTTVRGRPGAAEGRVTGPIAATLPLRKLLFSATLTNNPQKLASLGLANPVFYTARE 398          
BLAST of mRNA_C-tenellus_contig714.1.1 vs. uniprot
Match: A0A1E7FSJ3_9STRA (DEAD-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSJ3_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.420e-66
Identity = 142/345 (41.16%), Postives = 188/345 (54.49%), Query Frame = 1
Query:   10 PMEEVAKEWGLDARLAQTLREEGVKHFFPIQVRVVPEIVATERH-SHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVLLPSRDLAMQVHKVFQRYAE--RTGLRVGLAIGQTNFLEEQLSLVGRFALAGNPVAAARACSLRGTGAVSWQGPSLTGNSTSVPSGGASEVDIVVATPGRLMDHLSQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLAASYRREPGSVSRVVNGDLQLFSTPALALAHSDAKTEDTHKTASPRSNKPSPFQFPSGIQLEPVTIRGRPLATGARVRGPTVSTPPLRKMLFSATLTSNPQKLAGLGVLNPVMFSARE 1035
            P+ E A+ WG+   L + L+  G +HFFPIQ   +P+ +  ERH + ++ RD+C +APTGSGKTL +VL VL AL  RRV RLRALV+LPSRDLA QV+ VF  Y +  R  LR+GLAIGQT F  EQ  L+                       +     S   N   +P+GG S VD++V TPGRL+DHL  TPGFTLQHLR+LVIDEADRLL+QSY GW+ +VL                    + + P  ++   D+K   T K  S  ++  SP      +QL                          RK+L+SATLT +PQKL+ L ++NP  F+A +
Sbjct:    5 PIAEAARRWGMAEFLVRNLQSNGHEHFFPIQALTIPDAIIAERHMTSLRIRDVCCAAPTGSGKTLAFVLPVLNALASRRVRRLRALVILPSRDLAQQVYGVFDAYRKGSRNDLRIGLAIGQTEFRAEQKKLI-----------------------LGDDADSGADNKRKIPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVLDC------------------VHAPPTQSM---DSKDNSTDKIYSDGTSSESPSDICQRVQL--------------------------RKLLYSATLTKDPQKLSSLRLINPKYFNAHD 279          
BLAST of mRNA_C-tenellus_contig714.1.1 vs. uniprot
Match: A0A7S3V688_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V688_9STRA)

HSP 1 Score: 228 bits (580), Expect = 7.600e-65
Identity = 152/363 (41.87%), Postives = 201/363 (55.37%), Query Frame = 1
Query:   19 EVAKEWGLDARLAQTLREEGVKHFFPIQVRVVPEIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVLLPSRDLAMQVHKVFQRYAERTGLRVGLAIGQTNFLEEQLSLVGRFALAGNPVAAARACSL--------RGTGAVSWQGP------SLTG-----------NSTSVPSGGASEVDIVVATPGRLMDHLSQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLAASYRREPGSVSRVVNGDLQLFS-TPALALAHSDAKTEDTHKTASPRSNKPSPFQFPSGIQLEPVTIRGRPLATGARVRGPTVSTPPLRKMLFSATLTSNPQKLAGLGVLNPVMFSA 1029
            E A  W L   L   L E+   +FFPIQ  V+P+++A+ERH+H+++RDICV+APTGSGKTL +VL VL +L  RR+ RLRALV+LPSRDLA QV KVFQRY++ + L +GLAIGQT+F  EQ SL+    + G        C            T A S+  P      SL G           +    P GG S VD++V TPGRL+DHL +TPGFTLQHLR+L+ DEADRL+NQ YQ W+ +V+ A+      S++    G  +L   T    +  +D+   +T  T   RS           +QL                          RK+LFSATLT +P+KLA LG++NP  F A
Sbjct:  176 EAANLWKLAPFLINNLEEDEYDNFFPIQALVIPDVIASERHAHIRNRDICVAAPTGSGKTLSFVLPVLNSLANRRIKRLRALVVLPSRDLAAQVFKVFQRYSKGSDLSIGLAIGQTDFEAEQSSLIFEKKMIGFQPREEYRCQYALKPFSVKNATKAYSFDAPGDKSDVSLGGCWAHGDLKDFPDLCDTPIGGKSAVDVLVCTPGRLIDHLDKTPGFTLQHLRFLIADEADRLVNQGYQDWIRRVVEAASAGPDRSLNMDSCGLQKLDPVTWRRGIDANDSNHANTQDTNVCRS-----------VQL--------------------------RKLLFSATLTKDPRKLASLGLVNPKYFDA 501          
BLAST of mRNA_C-tenellus_contig714.1.1 vs. uniprot
Match: A0A7S4EEM3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEM3_9STRA)

HSP 1 Score: 222 bits (565), Expect = 1.160e-62
Identity = 151/368 (41.03%), Postives = 209/368 (56.79%), Query Frame = 1
Query:   10 PMEEVAKEWGLDARLAQTLREEGVKHFFPIQVRVVPEIVATERH-SHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVLLPSRDLAMQVHKVFQRY--AERTGLRVGLAIGQTNFLEEQLSLVG---------------RFAL-AGNPVAAARACS--LRGTGAVSWQGPSLTGNSTS--VPSGGASEVDIVVATPGRLMDHLSQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLAASYRREPGSVSRVVNGDLQLFSTPALALAHSDAKTEDTHK--TASPRSNKPSPFQ-FPSGIQLEPVTIRGRPLATGARVRGPTVSTPPLRKMLFSATLTSNPQKLAGLGVLNPVMFSARE 1035
            P+ E A+ WG+   L + L   G KHFFPIQ  V+P+++  ERH + ++ RDIC +APTGSGKTL +VL VL AL  R+V RLRALV+LPSRDLA QV++VF  Y    +  L++GLAIGQT+F  EQ  L+                R +L  GN   A  A    LR    ++ +  +L  N+ +  +P+GG S VD++V TPGRL+DHL  TPGFTLQHLR+LVIDEADRLL+QS+ GW+ +VL                  +    TP+  +   D   ++     T  P +++ S    F   I    +   G P     R++        LRK+L+SATLT +PQKL+ L ++NP  F+A +
Sbjct:  122 PIVEAARRWGMADFLVRNLISNGHKHFFPIQALVIPDVIVAERHMTSLRVRDICCAAPTGSGKTLAFVLPVLNALAARKVRRLRALVILPSRDLAQQVYEVFDAYKRGSKNDLQIGLAIGQTDFQAEQKRLIFGDDKENVNGKSWTQLRNSLDPGNINLALDAMKEQLRSDKGINGKTKNLDSNNRTPRIPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSFHGWIQRVLDC----------------VHALPTPSSQIIGEDRNQDEGEDVITIDPITHRRSEHDPFVDNISSAAI---GPPSNINQRIQ--------LRKLLYSATLTKDPQKLSSLRLVNPKYFNAHD 462          
BLAST of mRNA_C-tenellus_contig714.1.1 vs. uniprot
Match: A0A448ZLR2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLR2_9STRA)

HSP 1 Score: 222 bits (565), Expect = 2.240e-62
Identity = 147/370 (39.73%), Postives = 207/370 (55.95%), Query Frame = 1
Query:   10 PMEEVAKEWGLDARLAQTLREEGVKHFFPIQVRVVPEIVATERHS-HVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVLLPSRDLAMQVHKVFQRYAE--RTGLRVGLAIGQTNFLEEQLSLV----------------------GRFALAGNPVAAARACSLRGTGAVSWQGPSLTGNS--TSVPSGGASEVDIVVATPGRLMDHLSQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLAASYRREPGSVSRVVNGDLQLFSTPALALAHSDAKTEDTHKTASPRSNKPSP-FQFPSGIQLEPVTIRGRPLATGARVRGPTVSTPPLRKMLFSATLTSNPQKLAGLGVLNPVMFSARE 1035
            P+ E A+ WG+   L + L   G +HFFPIQ  V+P+++  ERH   ++ RD+C +APTGSGKTL +VL VL AL  RRV RLRALV+LPSRDLA QV++VF  Y++  +  LR+GLAIGQT+F  EQ  L+                      G   LA + +       L     +  +      N+  + +P+GG S VD++V TPGRL+DHL  TPGFTLQHLR+LVIDEADRLL+QSY GW+ +VL                    + + PA     ++ KT++   +  P +++ S    F +GI  E    +    ++   V         LRK+L+SATLT +PQKL+ L ++NP  F+A +
Sbjct:  184 PIVEAARRWGMADFLVRNLVSNGHEHFFPIQALVIPDVIVAERHMMSLRVRDVCCAAPTGSGKTLAFVLPVLNALAARRVRRLRALVILPSRDLAQQVYEVFDAYSKGSKNDLRIGLAIGQTDFKAEQKKLIFGDSDENEDGNNWTRLQNSLDPGNLELALDAMRE----QLENDNDIGDETKDWKSNNAKSKIPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVLDC------------------VHAPPAPTSRTAEYKTDEGTISIDPVTHRRSENSSFVTGIGPE----KDNQSSSDVGVHSNICQRIQLRKLLYSATLTKDPQKLSALRLINPKYFNAHD 527          
BLAST of mRNA_C-tenellus_contig714.1.1 vs. uniprot
Match: B7G364_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G364_PHATC)

HSP 1 Score: 203 bits (517), Expect = 4.270e-58
Identity = 104/238 (43.70%), Postives = 156/238 (65.55%), Query Frame = 1
Query:    7 RPMEEVAKEWGLDARLAQTLREEGVKHFFPIQVRVVPEIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVLLPSRDLAMQVHKVFQRYAERTGLRVGLAIGQTNFLEEQLSLVGRFALAGNPVAAARACSLRGTGAVSWQGPSLTGNSTSVPS--GGASEVDIVVATPGRLMDHLSQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLAASYRREPGSV 714
            +P+++ A  W +   L   L+ +G  +FFPIQ   +P+++A+ERH+++Q+RD+C++APTGSGKTL YVL VL +L  R++ RLRALV+LPSRDLA QV KVF+ + E + L+VGLAIGQ++F+ EQ++++   A                            GN   +P      S +D++V TPGRL+DHL  TPGF+L+HLR+L++DEADRLL+Q+Y  W+G+V+ ++     G V
Sbjct:    4 QPIDQAATAWKIAPFLTNNLKRDGFANFFPIQALAIPDVIASERHAYIQARDVCITAPTGSGKTLAYVLPVLNSLANRKIRRLRALVVLPSRDLANQVFKVFKSFMEGSDLKVGLAIGQSDFVAEQMAILALQAFED-------------------------GNDHDLPEKRDPQSTIDVLVCTPGRLVDHLDNTPGFSLEHLRFLIVDEADRLLSQTYHNWIGRVIQSANSGRGGVV 216          
BLAST of mRNA_C-tenellus_contig714.1.1 vs. uniprot
Match: A0A7R9YBX1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBX1_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.440e-57
Identity = 154/383 (40.21%), Postives = 197/383 (51.44%), Query Frame = 1
Query:   13 MEEVAKEWGLDARLAQTLREEGVKHFFPIQVRVVPEIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMR------RRVVRLRALVLLPSRDLAMQVHKVFQRYAERTGLRVGLAIG---------------QTNFLEEQLSLVG-----------RFALAG----------NPVAAARACSLRGTGAVSWQGPSLTGNSTSVPSGGASEVDIVVATPGRLMDHLSQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLAASYRREPGSVSRVVNGDLQLFSTPALALAHSDAKTEDTHKTASPRSNKPSPFQFPSGIQLEPVTIRGRPLATGARVRG-PTVSTPPLRKMLFSATLTSNPQKLAGLGVLNPVMFSAR 1032
            +EE A+ W L   + Q  R+EGV+ FFPIQ  V+P I+++   +   +RD+ VSAPTGSGKTL Y L +LQAL++      RR   LRALVLLPSR LA QV+ V  RY +   + +GLA G                 +F  EQ  L G            F + G          NP A        GTG++  +GP       ++  GG S VD++VATPGRLM HL  TPGFTLQHL +LV+DEADRLL+QSYQ WV +VL AS  + P S S                            KT         P +    +++EPV IRG   A      G P    PPLR+MLFSAT+T +PQKLA L +  P+MF+ R
Sbjct:   92 LEEAAESWKLHPEIVQVARQEGVEKFFPIQTAVIPRILSSSAITRRAARDVIVSAPTGSGKTLTYALPILQALLKQRFPHGRRQRHLRALVLLPSRALAAQVYGVMLRYTQGLDIEIGLATGGGKVDPAAAAESRSGAGDFEMEQRRLTGCVASDAPPPTGGFGILGPGEPEDGTKPNPSALLPG-GFPGTGSL-LRGPIR----RTLGPGGRSRVDVLVATPGRLMSHLDYTPGFTLQHLEFLVVDEADRLLSQSYQNWVQRVLHASAMQAPESFS--------------------------ADKT---------PRRLGDRVKIEPVRIRGAGTAAQGSSGGRPRSLAPPLRRMLFSATMTRDPQKLAHLDLFYPMMFTVR 433          
BLAST of mRNA_C-tenellus_contig714.1.1 vs. uniprot
Match: A0A1X2IB12_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IB12_9FUNG)

HSP 1 Score: 198 bits (504), Expect = 2.590e-55
Identity = 132/337 (39.17%), Postives = 182/337 (54.01%), Query Frame = 1
Query:   37 GLDARLAQTLREEGVKHFFPIQVRVVPEIVATERHSHVQSR----DICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVLLPSRDLAMQVHKVFQRYAERTGLRVGLAIGQTNFLEEQLSLVGRFALAGNPVAAARACSLRGTGAVSWQGPSLTGNSTSVPSGGASEVDIVVATPGRLMDHLSQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLAASYRREPGSVSRVVNGDLQLFSTPALALAHSDAKTEDTHKTASPRSNKPSPFQFP-SGIQLEPVTIRGRPLATGARVRGPTVSTPPLRKMLFSATLTSNPQKLAGLGVLNPVMFSAR 1032
            GL + L Q  +++G+  FF +Q++V+P  +   R +   +R    D+C+SAPTGSGKTL YVL ++  L +R V RLRALV+LP+RDL +QV + F  + + T L+VG+A+GQ +F++EQ+SLVG+                                S    +GG S+VDI++ATPGRLMDHL  TP FTLQHLR+LVIDEAD+LLNQSYQ W+  +L AS   +P +       D   F T   ++  SD             S   S F  P S I L                       P ++K+LFSATLT NP K+AGL + +P   S +
Sbjct:   80 GLSSSLIQRCQDQGLSSFFAVQMQVIPAFL--RRKALYDTRRAPGDLCISAPTGSGKTLAYVLPIVDILSKRIVTRLRALVILPTRDLVIQVKETFDAFVKGTDLKVGIALGQHSFIQEQISLVGK--------------------------------SNEKYNGGHSKVDILIATPGRLMDHLKDTPNFTLQHLRFLVIDEADKLLNQSYQDWLNHILHAS---QPPTSKNKSTLD---FKTDKYSVVESDGVAP---------SFMSSCFDLPTSDIDLP--------------------KAPSVQKLLFSATLTKNPGKIAGLHLTDPEYISVQ 347          
BLAST of mRNA_C-tenellus_contig714.1.1 vs. uniprot
Match: K0SZ73_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SZ73_THAOC)

HSP 1 Score: 201 bits (512), Expect = 6.070e-55
Identity = 146/381 (38.32%), Postives = 201/381 (52.76%), Query Frame = 1
Query:   10 PMEEVAKEWGLDARLAQTLREEGVKHFFPIQVRVVPEIVATERHSHVQ-SRDICVSAPTGSGKTLVYVLGVLQALM-------RRRVVRLRALVLLPSRDLAMQVHKVFQRYAERTGLRVGLAIG----QTNFLEEQLSLV--------GRFA---------LAGNPVAAARA---------CSLRGTGAVSWQGPSLTGNSTSVPSGGASEVDIVVATPGRLMDHLSQTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLAASYRREPGSVSRVVNGDLQLFSTPALALAHSDAKTED--THKTASPRSNKPSPFQFPSGIQLEPVTIRGRPLATGARVRGPTVSTP-PLRKMLFSATLTSNPQKLAGLGVLNPVMFSA 1029
            P+E+ A+ W L   L   LRE+  + F PIQ  V+P+++ +ER+SH++ +RD+C  +PTGSGKTL +VL +L AL         R + RLRALV+LPSRDLA QVH VF RY++ + +++GLA+G    +T+   E+ SLV        G +           +G P+  A A                A   +G   +    +    G S VDI+V TPGRL+DHL  TPGFTLQHLR++VIDEADRL+NQ YQ W+ +VL AS          +     +    P            D  TH+ A             SG      ++ G    T + + G T+  P PLRK+LFSATLT +PQKLA LG+ NP  + A
Sbjct:  171 PLEQAARHWNLPRFLVDNLREDSYERFLPIQCMVIPDVIESERNSHLRGARDVCCHSPTGSGKTLAFVLPILTALHDGTSCGGARGLRRLRALVVLPSRDLARQVHGVFMRYSKGSRIKIGLAVGGGRKRTDLTNERRSLVVESQHESTGHYKEDDGTVIRRRSGGPLEEANARVRHSFDPTSISEALSAFDGRGSKDSCFEATPKICGISAVDILVCTPGRLVDHLDSTPGFTLQHLRFIVIDEADRLVNQPYQNWIRRVLQASNSENCFEPLNLDMSFREYIRQPLRTAPDGQTFNIDPVTHRIAG------------SGAAH---SLLGDSNTTESGLIGGTIGRPVPLRKLLFSATLTQDPQKLARLGLDNPKHYDA 536          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig714.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSH0_ECTSI4.220e-14664.23DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YS10_9STRA4.390e-11456.76DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A1E7FSJ3_9STRA2.420e-6641.16DEAD-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A7S3V688_9STRA7.600e-6541.87Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4EEM3_9STRA1.160e-6241.03Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448ZLR2_9STRA2.240e-6239.73Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B7G364_PHATC4.270e-5843.70Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A7R9YBX1_9STRA1.440e-5740.21Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A1X2IB12_9FUNG2.590e-5539.17p-loop containing nucleoside triphosphate hydrolas... [more]
K0SZ73_THAOC6.070e-5538.32Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig714contigC-tenellus_contig714:156..2624 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FSH0
Preferred nameDBP6
PFAMsDEAD,Helicase_C
Model size1035
Max annot lvl2759|Eukaryota
KEGG koko:K14807
Hectar predicted targeting categoryother localisation
GOsGO:0000460,GO:0000463,GO:0000466,GO:0000470,GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0010501,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017151,GO:0019899,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360,GO:1990904
Exons6
Evalue2.95e-144
EggNOG OGsCOG0513@1|root,KOG0350@2759|Eukaryota
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-04_000860.1
EC3.6.4.13
Descriptionhelicase activity
Cds size1023
COG categoryL
BRITEko00000,ko01000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig714.1.1prot_C-tenellus_contig714.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig714 156..2612 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790015.362368-CDS-C-tenellus_contig714:155..4951680790015.362368-CDS-C-tenellus_contig714:155..495Choristocarpus tenellus KU2346CDSC-tenellus_contig714 156..495 -
1680790015.3770087-CDS-C-tenellus_contig714:715..8791680790015.3770087-CDS-C-tenellus_contig714:715..879Choristocarpus tenellus KU2346CDSC-tenellus_contig714 716..879 -
1680790015.3857641-CDS-C-tenellus_contig714:1209..13251680790015.3857641-CDS-C-tenellus_contig714:1209..1325Choristocarpus tenellus KU2346CDSC-tenellus_contig714 1210..1325 -
1680790015.3965404-CDS-C-tenellus_contig714:1632..18221680790015.3965404-CDS-C-tenellus_contig714:1632..1822Choristocarpus tenellus KU2346CDSC-tenellus_contig714 1633..1822 -
1680790015.405912-CDS-C-tenellus_contig714:2261..23841680790015.405912-CDS-C-tenellus_contig714:2261..2384Choristocarpus tenellus KU2346CDSC-tenellus_contig714 2262..2384 -
1680790015.4147482-CDS-C-tenellus_contig714:2522..26121680790015.4147482-CDS-C-tenellus_contig714:2522..2612Choristocarpus tenellus KU2346CDSC-tenellus_contig714 2523..2612 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790015.4257126-UTR-C-tenellus_contig714:2612..26241680790015.4257126-UTR-C-tenellus_contig714:2612..2624Choristocarpus tenellus KU2346UTRC-tenellus_contig714 2613..2624 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig714.1.1

>prot_C-tenellus_contig714.1.1 ID=prot_C-tenellus_contig714.1.1|Name=mRNA_C-tenellus_contig714.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=341bp
MEEVAKEWGLDARLAQTLREEGVKHFFPIQVRVVPEIVATERHSHVQSRD
ICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVLLPSRDLAMQVHKVF
QRYAERTGLRVGLAIGQTNFLEEQLSLVGRFALAGNPVAAARACSLRGTG
AVSWQGPSLTGNSTSVPSGGASEVDIVVATPGRLMDHLSQTPGFTLQHLR
YLVIDEADRLLNQSYQGWVGKVLAASYRREPGSVSRVVNGDLQLFSTPAL
ALAHSDAKTEDTHKTASPRSNKPSPFQFPSGIQLEPVTIRGRPLATGARV
RGPTVSTPPLRKMLFSATLTSNPQKLAGLGVLNPVMFSARE
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mRNA from alignment at C-tenellus_contig714:156..2624-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig714.1.1 ID=mRNA_C-tenellus_contig714.1.1|Name=mRNA_C-tenellus_contig714.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2469bp|location=Sequence derived from alignment at C-tenellus_contig714:156..2624- (Choristocarpus tenellus KU2346)
GGCAGCCGCCCAATGGAAGAGGTTGCAAAAGAGTGGGGGTTGGATGCAAG GCTTGCGCAGACTCTCAGAGAGGAGGGAGTGAAGCACTTCTTCCCTATTC AGGTATAGGAAAGGAATTTGAAGGGATGAATCTTACGGCGCTAACGCCAG CACCTTCGTATAATGTTGTGAATCGGTGTGTTGGTTATTCCCACCCCATA TTACCCAAGTTGAAAATTAAAATCCTTACCATCCCATCAGGTTCGTGTGG TTCCGGAAATTGTTGCAACTGAACGCCACTCTCATGTACAGAGCAGGGAC ATCTGTGTGTCAGCTCCAACTGGGAGTGGCAAGACGCTGGTCTACGTTCT TGGTGTGCTCCAGGTGTCTGTTTTTCGGGTAGCGATTTTGGGTATGAAAG TGTCTGTCAAATTACTTTGTATTGAATGACCTAGCTCTAGGTTTCCTTTC GGGCTAGGGCTAGGTTTAATGGCAGCCTATGTGAATACCCTAGGAATCTG GCAGACATACAAATATTTGCCAAACTCAGTTCTTTTGAGGCTCGTTGTTT CGATCATGGCAATCAATGACTAAGTGTCCAGGCCAGCCTTATCCTTTGCT AGAAGTGCTGACTTAGGAAACCCTACAATCAATGGGATGGGTGCATCCAT TTGCGGGTTGTCATTCCCGCAGAGATATGAGGGACTTTTGATCTTGACAC TGGTGGCACATTTTGTATCTGATGCTGACTGCAGGCCTAAAATCAACTGC ATGCAACAAAGGACAACAACACCCTGCCGCTTCCTTGCACCTCCCCGCAC AGGCTCTTATGCGCAGGCGAGTTGTTCGCTTGCGTGCACTGGTCCTTCTC CCTTCTCGTGACCTGGCTATGCAGGTGCACAAGGTCTTTCAGCGGTATGC AGAACGAACTGGCCTCAGGGTAGGGCTTGCCATTGGACAGACCAACTTCT TGGAGGAACAGCTATCCTTAGTAGGGAGGTTTGCTCTTGCAGGTAGAGGT TCGCAGTCTGTGTGGATGATTAACAGACTTGTCTAGGTGTCTCTTGCAAG GGAGAAGCCGACTCAATGTGGGCCTGTGCTCGTTTAAACAATCAGATTGT GATGTGGTGTATGTGCTCCATTCCCACAACGCTGCTTATCCCGCAATGCT TGTGTCATGGTTCACTCGATAGGATAGCTAGGAACCCTCACCTGCTGTAA TATCTAGACATCATTTCTATCCCCACCTTCCCCTTCACTTTCCCTCCCTT GTCTTTCGTCCAACCAATAGCCTTTGACCATCTCCCCTTATCTCTCCAGG AAACCCTGTGGCTGCTGCAAGAGCATGTTCCCTTCGGGGGACTGGAGCTG TCTCTTGGCAAGGGCCCAGCTTGACAGGGAATTCCACATCAGTTCCATCC GGGGGAGCTAGTGAGGTGAATGAGCCCAACTAGCCCAGCCTCTTCAGGAC ATGCTTTTGGTCGATGTGGTTGGTGTGCCTAAAGGTGGTTGAGGGCTACA AGAGATTTTTGGAGGCTGTGTTTGCTGTTGTAATCTTTTTTGGCTTGGAG GATGTGTGTGGATGAATTTAGACTGTTGGACAAGGTTCTTTGTCAGTTCG GGGAGTGATGGCAACGTGGGACGCCGTTTCTCTGTTGATGTTCTTTTGGA ATGTACCTTCAGTGCATTATATCTCTATCTCCTTTTCCCGTCCCATTCCA ACCATGCTCCGTTTCCTGCACCTTGTTGTTATTCTTTTGTCCCAGGTGGA CATTGTGGTAGCTACACCAGGGAGACTCATGGACCACCTTTCACAGACTC CAGGCTTCACCCTGCAGCATCTCCGATACCTTGTCATTGATGAGGCAGAT CGACTACTGAACCAGAGCTACCAGGGCTGGGTGGGGAAAGTCTTGGCTGC GTCCTACAGGTGAAGGGAGTGGTTAGTTGAGGGACAGGTTTTGACCTATA AGTGTACTTCAGTGTGCTTTGTTGAAGCTAAGGCGATGAGATCCTGTATC CCCCCTTGTATTGGACCTCTATCCCTCCATTGCCTGACACTGATATATAT ATTTCTTTGTTTTGTTCTCACTTTTTAAACTGTTCCTCTTGACCCTTTTT TTTCCCACCTATGGCTTGACATGCTCTAGGAGAGAGCCTGGATCCGTCTC TCGGGTGGTTAATGGAGACCTACAGCTCTTCTCGACCCCTGCCCTTGCTC TTGCCCATTCTGATGCAAAGACTGAAGATACACACAAAACAGCTTCCCCT CGCAGTAATAAACCCTCCCCTTTCCAATTTCCCTCTGGGATTCAACTTGA GCCTGTGACAATTCGGGGGCGCCCCCTGGCAACTGGGGCCCGAGTCCGAG GACCCACGGTGTCCACTCCGCCACTGAGAAAGATGCTGTTTTCAGCCACT CTCACAAGCAATCCCCAGAAGCTTGCGGGGCTCGGCGTCCTCAATCCAGT CATGTTCTCAGCGAGGGAA
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Coding sequence (CDS) from alignment at C-tenellus_contig714:156..2624-

>mRNA_C-tenellus_contig714.1.1 ID=mRNA_C-tenellus_contig714.1.1|Name=mRNA_C-tenellus_contig714.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1023bp|location=Sequence derived from alignment at C-tenellus_contig714:156..2624- (Choristocarpus tenellus KU2346)
ATGGAAGAGGTTGCAAAAGAGTGGGGGTTGGATGCAAGGCTTGCGCAGAC
TCTCAGAGAGGAGGGAGTGAAGCACTTCTTCCCTATTCAGGTTCGTGTGG
TTCCGGAAATTGTTGCAACTGAACGCCACTCTCATGTACAGAGCAGGGAC
ATCTGTGTGTCAGCTCCAACTGGGAGTGGCAAGACGCTGGTCTACGTTCT
TGGTGTGCTCCAGGCTCTTATGCGCAGGCGAGTTGTTCGCTTGCGTGCAC
TGGTCCTTCTCCCTTCTCGTGACCTGGCTATGCAGGTGCACAAGGTCTTT
CAGCGGTATGCAGAACGAACTGGCCTCAGGGTAGGGCTTGCCATTGGACA
GACCAACTTCTTGGAGGAACAGCTATCCTTAGTAGGGAGGTTTGCTCTTG
CAGGAAACCCTGTGGCTGCTGCAAGAGCATGTTCCCTTCGGGGGACTGGA
GCTGTCTCTTGGCAAGGGCCCAGCTTGACAGGGAATTCCACATCAGTTCC
ATCCGGGGGAGCTAGTGAGGTGGACATTGTGGTAGCTACACCAGGGAGAC
TCATGGACCACCTTTCACAGACTCCAGGCTTCACCCTGCAGCATCTCCGA
TACCTTGTCATTGATGAGGCAGATCGACTACTGAACCAGAGCTACCAGGG
CTGGGTGGGGAAAGTCTTGGCTGCGTCCTACAGGAGAGAGCCTGGATCCG
TCTCTCGGGTGGTTAATGGAGACCTACAGCTCTTCTCGACCCCTGCCCTT
GCTCTTGCCCATTCTGATGCAAAGACTGAAGATACACACAAAACAGCTTC
CCCTCGCAGTAATAAACCCTCCCCTTTCCAATTTCCCTCTGGGATTCAAC
TTGAGCCTGTGACAATTCGGGGGCGCCCCCTGGCAACTGGGGCCCGAGTC
CGAGGACCCACGGTGTCCACTCCGCCACTGAGAAAGATGCTGTTTTCAGC
CACTCTCACAAGCAATCCCCAGAAGCTTGCGGGGCTCGGCGTCCTCAATC
CAGTCATGTTCTCAGCGAGGGAA
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