mRNA_C-tenellus_contig7132.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7132.1.1 vs. uniprot
Match: D8LTR9_ECTSI (Mitochondrial inner membrane protease subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR9_ECTSI) HSP 1 Score: 115 bits (287), Expect = 3.750e-25 Identity = 54/97 (55.67%), Postives = 72/97 (74.23%), Query Frame = 1 Query: 721 VRQGDVVMARAPYDPSKCVVKRVIALPGETVQVRPPPSDPHNTQQIEKRAEVVPEGHVWLEGDNATNSKDSRHYGAVPQALVNGKVSLRLYPLSTVG 1011 + G +V+ ++P + + VVKRV LPG+++ VRPP D +N+Q IEKR+EVVPEGHVWL GDN NSKDSR++G+VPQALV G V LR++P G Sbjct: 135 IEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFG 231
BLAST of mRNA_C-tenellus_contig7132.1.1 vs. uniprot
Match: A0A5J4YU45_PORPP (Mitochondrial inner membrane protease subunit 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YU45_PORPP) HSP 1 Score: 100 bits (250), Expect = 3.250e-21 Identity = 51/107 (47.66%), Postives = 69/107 (64.49%), Query Frame = 1 Query: 697 QFSLRVFGVRQGDVVMARAPYDPSKCVVKRVIALPGETVQVRPPPSDPHNTQQIEKRAEVVPEGHVWLEGDNATNSKDSRHYGAVPQALVNGKVSLRLYPLSTVGCL 1017 + S R+ GVR+GDV++AR PYDP + KRV+A+ GETVQ +Q+ +P+GH+W+EGDN +NS DSRHYGAVP LV G V R++PL G + Sbjct: 52 KMSHRLHGVRKGDVIVARCPYDPRLDICKRVVAVEGETVQ--------RGRKQV-----YIPKGHIWVEGDNKSNSNDSRHYGAVPLGLVFGHVRYRVWPLDRRGMI 145
BLAST of mRNA_C-tenellus_contig7132.1.1 vs. uniprot
Match: A0A2R6XU93_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XU93_MARPO) HSP 1 Score: 98.6 bits (244), Expect = 3.340e-20 Identity = 54/106 (50.94%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 694 QQFSLRVFGVRQGDVVMARAPYDPSKCVVKRVIALPGETVQVRPPPSDPHNTQQIEKRAEVVPEGHVWLEGDNATNSKDSRHYGAVPQALVNGKVSLRLYPLSTVG 1011 + S++ VR GDVVMAR+P +P V KRV+ L G+ V V P S H R VVP+GHVWL+GDN NS DSRHYG VP AL+ GKV R++PL G Sbjct: 57 EHLSVKFEKVRSGDVVMARSPVNPRVMVCKRVLGLEGDRVVVLPTNSKGHI------RHVVVPKGHVWLQGDNIYNSTDSRHYGPVPYALIQGKVCYRIWPLEGWG 156
BLAST of mRNA_C-tenellus_contig7132.1.1 vs. uniprot
Match: UPI002010C6CC (mitochondrial inner membrane protease subunit 1 n=1 Tax=Leguminivora glycinivorella TaxID=1035111 RepID=UPI002010C6CC) HSP 1 Score: 96.7 bits (239), Expect = 1.220e-19 Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 694 QQFSLRVFGVRQGDVVMARAPYDPSKCVVKRVIALPGETVQVRPPPSDPHNTQQIEKRAEVVPEGHVWLEGDNATNSKDSRHYGAVPQALVNGKVSLRLYPLSTVGCL 1017 + + R+ +R+GD+V+AR+P++PS+ + KRV LPG+ ++ Q +R++VVP GHVWLEGDNA+NS DSR YG VPQ L+ +V R++PL + L Sbjct: 55 EHITPRLQRLRRGDIVIARSPHNPSQNICKRVTGLPGDKMR-----------GQFPRRSQVVPRGHVWLEGDNASNSSDSRVYGPVPQGLIRSRVLCRVWPLDKMASL 151
BLAST of mRNA_C-tenellus_contig7132.1.1 vs. uniprot
Match: UPI0014039620 (mitochondrial inner membrane protease subunit 1 isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014039620) HSP 1 Score: 97.8 bits (242), Expect = 1.290e-19 Identity = 65/167 (38.92%), Postives = 92/167 (55.09%), Query Frame = 1 Query: 544 HCTL--CTRALLKRLHAAPK*PSPSPCSCSPMVELSQHL*CTR-SYACESYRN-----QQFSLRVFGVRQGDVVMARAPYDPSKCVVKRVIALPGETVQVRPPPSDPHNTQQIEKRAEVVPEGHVWLEGDNATNSKDSRHYGAVPQALVNGKVSLRLYPLSTVGCLP 1020 HCTL ++ + + K PS S ++ LS+ C+ S Y N + FS + +R+GDVV+AR P +P + KRV+ALPG+ + R P H++ + VP GHVWLEGDNA NS DSR YG VP AL+ G+V L+++P S G +P Sbjct: 24 HCTLEYVGELVVSQHDRSDKRPSSGTLSAVLLLHLSRLTKCSGPSMQPSLYTNDVVLAEHFSRHLGRIRRGDVVIARNPANPRTFICKRVVALPGDALNKRLP----HHSSRY------VPLGHVWLEGDNAANSTDSRSYGPVPYALIRGRVCLKVWPPSQFGPIP 180
BLAST of mRNA_C-tenellus_contig7132.1.1 vs. uniprot
Match: D8LRQ8_ECTSI (Imp1 homolog, Inner Membrane Peptidase complex subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ8_ECTSI) HSP 1 Score: 97.4 bits (241), Expect = 1.510e-19 Identity = 54/126 (42.86%), Postives = 76/126 (60.32%), Query Frame = 1 Query: 694 QQFSLRVFGVRQGDVVMARAPYDPSKCVVKRVIALPGETVQVRPPPSDPHNTQQIEKRAEVVPEGHVWLEGDNATNSKDSRHYGAVPQALVNGKVSLRLYPLSTVGCLPPRIQVPMSSPPPPESSS 1071 + FS + + +GDVV+A P +P V KR+I LPGETV VR + + R E VPEGHVWLEGDN +NS DSR YG +P A+V G+V + +P S +G + R+ S+ P E+++ Sbjct: 31 EMFSAKTGRLDRGDVVIAIPPQNPKLRVCKRIIGLPGETVIVR-------SRSWFDDRPEFVPEGHVWLEGDNPSNSSDSRTYGPIPLAMVRGRVFFKAWPPSEIGRVARRVPEAASAVLPRETAA 149
BLAST of mRNA_C-tenellus_contig7132.1.1 vs. uniprot
Match: A0A2K1JRM8_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JRM8_PHYPA) HSP 1 Score: 98.2 bits (243), Expect = 3.120e-19 Identity = 52/101 (51.49%), Postives = 65/101 (64.36%), Query Frame = 1 Query: 694 QQFSLRVFGVRQGDVVMARAPYDPSKCVVKRVIALPGETVQVRPPPSDPHNTQQIEKRAEVVPEGHVWLEGDNATNSKDSRHYGAVPQALVNGKVSLRLYP 996 + S R ++ GDVVMAR+P +P V KRV+ L G++V V P S H Q VVP+GHVWL+GDNA NS DSRHYG VP AL+ GKV R++P Sbjct: 134 EHLSSRFERIKPGDVVMARSPANPRLVVCKRVLGLEGDSVTVLPTSSRGHIRQT------VVPKGHVWLQGDNAYNSTDSRHYGPVPYALIQGKVFYRIWP 228
BLAST of mRNA_C-tenellus_contig7132.1.1 vs. uniprot
Match: A0A8J9UJU7_9NEOP ((lesser marbled fritillary) hypothetical protein n=1 Tax=Brenthis ino TaxID=405034 RepID=A0A8J9UJU7_9NEOP) HSP 1 Score: 94.0 bits (232), Expect = 9.850e-19 Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 694 QQFSLRVFGVRQGDVVMARAPYDPSKCVVKRVIALPGETVQVRPPPSDPHNTQQIEKRAEVVPEGHVWLEGDNATNSKDSRHYGAVPQALVNGKVSLRLYPLSTVGCL 1017 + + R+ +R+GD+++A+ P DP + + KR+ LPG+ V+ P + +++VP GHVWLEGDN++NSKDSR YG VPQ L+ G+V R++PL+ + L Sbjct: 52 EHITPRLQRLRKGDIIIAKCPTDPKQNICKRITGLPGDKVRGHFP-----------RGSQIVPRGHVWLEGDNSSNSKDSRIYGPVPQGLIRGRVVCRVWPLNKISSL 148
BLAST of mRNA_C-tenellus_contig7132.1.1 vs. uniprot
Match: A0A3B3I5U3_ORYLA (Mitochondrial inner membrane protease subunit n=5 Tax=Oryzias TaxID=8089 RepID=A0A3B3I5U3_ORYLA) HSP 1 Score: 94.7 bits (234), Expect = 1.180e-18 Identity = 46/109 (42.20%), Postives = 68/109 (62.39%), Query Frame = 1 Query: 691 NQQFSLRVFGVRQGDVVMARAPYDPSKCVVKRVIALPGETVQVRPPPSDPHNTQQIEKRAEVVPEGHVWLEGDNATNSKDSRHYGAVPQALVNGKVSLRLYPLSTVGCL 1017 N++ S + + +GD+V+A++P+DP + KRV+ L G+ V P + K VP+GHVWLEGDN TNS DSR+YG +P AL+ G+V L+L+P + G L Sbjct: 64 NERMSRHLCKIEKGDIVIAKSPFDPHMNICKRVVGLEGDKVCTGAP-------SDLFKTHTYVPKGHVWLEGDNLTNSSDSRNYGPIPYALIRGRVCLKLWPPHSFGTL 165
BLAST of mRNA_C-tenellus_contig7132.1.1 vs. uniprot
Match: UPI001040D6C2 (mitochondrial inner membrane protease subunit 1 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI001040D6C2) HSP 1 Score: 92.4 bits (228), Expect = 3.680e-18 Identity = 45/103 (43.69%), Postives = 68/103 (66.02%), Query Frame = 1 Query: 709 RVFGVRQGDVVMARAPYDPSKCVVKRVIALPGETVQVRPPPSDPHNTQQIEKRAEVVPEGHVWLEGDNATNSKDSRHYGAVPQALVNGKVSLRLYPLSTVGCL 1017 R+ +R+GD+V+A++P +P + + KR++ LPG+ V+ P KR++VVP GHVWLEGDN++NS DSR YG VPQ L+ +V R++PL + L Sbjct: 60 RLQRLRRGDIVIAKSPSNPKQNICKRIVGLPGDKVRGHFP-----------KRSQVVPRGHVWLEGDNSSNSADSRVYGPVPQGLIRSRVVCRVWPLDKITSL 151 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7132.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7132.1.1 >prot_C-tenellus_contig7132.1.1 ID=prot_C-tenellus_contig7132.1.1|Name=mRNA_C-tenellus_contig7132.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=116bp MARAPYDPSKCVVKRVIALPGETVQVRPPPSDPHNTQQIEKRAEVVPEGHback to top mRNA from alignment at C-tenellus_contig7132:510..6631+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7132.1.1 ID=mRNA_C-tenellus_contig7132.1.1|Name=mRNA_C-tenellus_contig7132.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=6122bp|location=Sequence derived from alignment at C-tenellus_contig7132:510..6631+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7132:510..6631+ >mRNA_C-tenellus_contig7132.1.1 ID=mRNA_C-tenellus_contig7132.1.1|Name=mRNA_C-tenellus_contig7132.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=348bp|location=Sequence derived from alignment at C-tenellus_contig7132:510..6631+ (Choristocarpus tenellus KU2346)back to top |