mRNA_C-tenellus_contig7131.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7131.2.1 vs. uniprot
Match: D7FXY6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY6_ECTSI) HSP 1 Score: 104 bits (259), Expect = 6.060e-24 Identity = 59/109 (54.13%), Postives = 71/109 (65.14%), Query Frame = 1 Query: 7 WAWVVDACAKTIIPVAPKLRQEYRTMK----GSTSFNSPSSSN--------QSTCFTIVGMDLMIDDELNPWIIEINHLPSFR-QTEMDYRMKKALVTDSLRLLDVQVG 294 WA + DAC KT + V P LR+EY G S +STCFTIVG+DLM+DDEL+PWIIEINHLPSFR +T MDYR+KK LV ++L LLDV+VG Sbjct: 850 WARLADACVKTFLTVGPMLRREYNAANPPPGGFASXXXXXXXXXXXXXXXXRSTCFTIVGVDLMVDDELDPWIIEINHLPSFRTETGMDYRIKKQLVFNTLSLLDVRVG 958
BLAST of mRNA_C-tenellus_contig7131.2.1 vs. uniprot
Match: A0A6H5JML2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML2_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 1.040e-15 Identity = 43/84 (51.19%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 7 WAWVVDACAKTIIPVAPKLRQEYRTM-------------KGSTSFNSPSSSNQSTCFTIVGMDLMIDDELNPWIIEINHLPSFR 219 WA + DAC KT + V P LR+EY KG + +P +S CFTIVG+DLM+DDEL+PWIIEINHLPSFR Sbjct: 856 WARLADACVKTFLTVGPMLRREYNAANPTPRGFASVAASKGKAATPTPPPP-RSNCFTIVGVDLMVDDELDPWIIEINHLPSFR 938
BLAST of mRNA_C-tenellus_contig7131.2.1 vs. uniprot
Match: D0MZB5_PHYIT (Tubulin polyglutamylase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MZB5_PHYIT) HSP 1 Score: 79.3 bits (194), Expect = 3.530e-15 Identity = 41/106 (38.68%), Postives = 66/106 (62.26%), Query Frame = 1 Query: 4 VWAWVVDACAKTIIPVAPKLRQEYRTM-----------KGSTSFNSPSSSNQSTCFTIVGMDLMIDDELNPWIIEINHLPSFR-QTEMDYRMKKALVTDSLRLLDV 285 +W + D C KTI+ V P L QEYR+ S S N+ SS+ S F ++GMD++ID++L PW++E+NHLPSF +++D+ +K+ L++ + LL+V Sbjct: 272 IWDQISDICLKTILSVQPTLAQEYRSTFAKYMRRPNSASRSVSQNTGSSTPPSCSFALLGMDVLIDEQLKPWLLEVNHLPSFGCDSQLDWSVKEPLISQTFDLLNV 377
BLAST of mRNA_C-tenellus_contig7131.2.1 vs. uniprot
Match: A0A078AGP1_STYLE (Beta-tubulin polyglutamylase n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AGP1_STYLE) HSP 1 Score: 79.0 bits (193), Expect = 4.870e-15 Identity = 38/96 (39.58%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 7 WAWVVDACAKTIIPVAPKLRQEYRTMKGSTSFNSPSSSNQSTCFTIVGMDLMIDDELNPWIIEINHLPSFR-QTEMDYRMKKALVTDSLRLLDVQV 291 W+ + D KTII PKL+ ++T K P S S CF I+G+D+ ID++L PW+IE+N PSF T +DY +KK L+ D++++L++ + Sbjct: 222 WSGIKDIILKTIISGLPKLQHVFKTSK-------PDDSENSQCFQILGIDIFIDEDLKPWLIEVNQAPSFTTDTPLDYNIKKNLLKDTIKMLNLSL 310
BLAST of mRNA_C-tenellus_contig7131.2.1 vs. uniprot
Match: W5NDA3_LEPOC (Tubulin tyrosine ligase-like family, member 6 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5NDA3_LEPOC) HSP 1 Score: 75.9 bits (185), Expect = 5.810e-14 Identity = 38/97 (39.18%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 7 WAWVVDACAKTIIPVAPKLRQEYRTMKGSTSFNSPSSSNQSTCFTIVGMDLMIDDELNPWIIEINHLPSFR-QTEMDYRMKKALVTDSLRLLDVQVG 294 W+ + D KT+I P L+ Y T P+ S+CF I+G D+++D +L PW++E+NH PSF +E+D ++K+AL+TD+LRLL++ V Sbjct: 348 WSNMEDVIIKTLISAHPILKHNYCT-------GFPNQLGPSSCFEILGFDILLDSKLKPWLLEVNHSPSFTTDSELDRQVKEALLTDTLRLLNLGVN 437
BLAST of mRNA_C-tenellus_contig7131.2.1 vs. uniprot
Match: UPI00073FC959 (tubulin polyglutamylase ttll6-like isoform X1 n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=UPI00073FC959) HSP 1 Score: 75.9 bits (185), Expect = 5.910e-14 Identity = 38/97 (39.18%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 7 WAWVVDACAKTIIPVAPKLRQEYRTMKGSTSFNSPSSSNQSTCFTIVGMDLMIDDELNPWIIEINHLPSFR-QTEMDYRMKKALVTDSLRLLDVQVG 294 W+ + D KT+I P L+ Y T P+ S+CF I+G D+++D +L PW++E+NH PSF +E+D ++K+AL+TD+LRLL++ V Sbjct: 348 WSNMEDVIIKTLISAHPILKHNYCT-------GFPNQLGPSSCFEILGFDILLDSKLKPWLLEVNHSPSFTTDSELDRQVKEALLTDTLRLLNLGVN 437
BLAST of mRNA_C-tenellus_contig7131.2.1 vs. uniprot
Match: A0A6P8EXI6_CLUHA (tubulin polyglutamylase TTLL13-like isoform X1 n=2 Tax=Clupea harengus TaxID=7950 RepID=A0A6P8EXI6_CLUHA) HSP 1 Score: 73.9 bits (180), Expect = 2.790e-13 Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 4 VWAWVVDACAKTIIPVAPKLRQEYRTMKGSTSFNSPSSSNQSTCFTIVGMDLMIDDELNPWIIEINHLPSFR-QTEMDYRMKKALVTDSLRLLDV 285 VW + D KT+I P LRQ YRT PS S+CF ++G D+++D +L PW+IE+NH PSF + +D +K+ L+ D+L LL++ Sbjct: 257 VWNSIEDVITKTVIVAEPVLRQNYRTAF-------PSHVGPSSCFELLGFDILLDCKLKPWLIEVNHSPSFNTDSALDTEVKETLLMDTLTLLNL 344
BLAST of mRNA_C-tenellus_contig7131.2.1 vs. uniprot
Match: UPI00106A4911 (tubulin polyglutamylase TTLL7-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A4911) HSP 1 Score: 73.9 bits (180), Expect = 2.810e-13 Identity = 34/96 (35.42%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 4 VWAWVVDACAKTIIPVAPKLRQEYRTMKGSTSFNSPSSSNQSTCFTIVGMDLMIDDELNPWIIEINHLPSF-RQTEMDYRMKKALVTDSLRLLDVQ 288 VW+ + D KT+I P +R YR + + SSN S CF I+G D+++D ++ PW++E+N PSF +++DY +K L+ D+++LL+++ Sbjct: 362 VWSNITDIIIKTLIVSQPHVRHSYRLCRPGSD-----SSNPSVCFEILGFDVLLDQKIKPWLLEVNRSPSFGTDSKLDYDIKSGLIRDAMKLLNIR 452
BLAST of mRNA_C-tenellus_contig7131.2.1 vs. uniprot
Match: A0A061QN84_9CHLO (Tubulin polyglutamylase ttll13 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QN84_9CHLO) HSP 1 Score: 72.8 bits (177), Expect = 3.780e-13 Identity = 36/91 (39.56%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 7 WAWVVDACAKTIIPVAPKLRQEYRTMKGSTSFNSPSSSNQSTCFTIVGMDLMIDDELNPWIIEINHLPSFR-QTEMDYRMKKALVTDSLRL 276 W+ V KT+I + P L+ YR++ G ++ +CF I+G+D+M+D +L PW+IE NH PSF T +D +K+AL+TD+L+L Sbjct: 87 WSEVCALAVKTLISIQPLLKHNYRSVLGY-------ENDGFSCFEILGLDIMLDSKLRPWLIECNHSPSFGIDTPLDLNVKEALITDTLKL 170
BLAST of mRNA_C-tenellus_contig7131.2.1 vs. uniprot
Match: A0A8J8P422_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P422_HALGN) HSP 1 Score: 73.6 bits (179), Expect = 3.860e-13 Identity = 34/92 (36.96%), Postives = 57/92 (61.96%), Query Frame = 1 Query: 16 VVDACAKTIIPVAPKLRQEYRTMKGSTSFNSPSSSNQSTCFTIVGMDLMIDDELNPWIIEINHLPSFRQ-TEMDYRMKKALVTDSLRLLDVQ 288 + D KT++ V P+L Y K P+++ +CF ++G D++ID + PW++E+NH PSF TE+D +K L+TD+LRLL+++ Sbjct: 319 IQDMVIKTLLSVQPQLAHSYNACK-------PNNAGSRSCFELLGFDILIDKKFKPWLLEVNHAPSFNDDTEVDKAVKTGLLTDTLRLLNIK 403 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7131.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7131.2.1 >prot_C-tenellus_contig7131.2.1 ID=prot_C-tenellus_contig7131.2.1|Name=mRNA_C-tenellus_contig7131.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=98bp LVWAWVVDACAKTIIPVAPKLRQEYRTMKGSTSFNSPSSSNQSTCFTIVGback to top mRNA from alignment at C-tenellus_contig7131:4709..5707+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7131.2.1 ID=mRNA_C-tenellus_contig7131.2.1|Name=mRNA_C-tenellus_contig7131.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=999bp|location=Sequence derived from alignment at C-tenellus_contig7131:4709..5707+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7131:4709..5707+ >mRNA_C-tenellus_contig7131.2.1 ID=mRNA_C-tenellus_contig7131.2.1|Name=mRNA_C-tenellus_contig7131.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=294bp|location=Sequence derived from alignment at C-tenellus_contig7131:4709..5707+ (Choristocarpus tenellus KU2346)back to top |