mRNA_C-tenellus_contig7098.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7098.2.1 vs. uniprot
Match: UPI001F00A048 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F00A048) HSP 1 Score: 62.0 bits (149), Expect = 3.990e-8 Identity = 44/122 (36.07%), Postives = 60/122 (49.18%), Query Frame = 1 Query: 28 TSVGVGREREEWILDSAASCHVTNMITHMTNYKPCVGNERVVTASRNSFC-IAGHGDLTILFPSRDNKEVEILLQNVAHVPDLGFNLFSCQAAADKGAKGIFTASSFSLLDGVLNFTRDPGC 390 T + V RE EW++D+AAS HVT + T YK G+ VV +SF + G GD+ I + + I L++V HVPDL NL S A +G F S + L G + R C Sbjct: 112 TCLHVSREDTEWVVDTAASYHVTPHKEYFTTYK--AGDFGVVKMGNSSFSDVVGIGDVQI----KTSSGSTITLKDVRHVPDLRLNLLSVAALDKQGYDNNFGKSIWKLSRGAMTVARGHIC 227
BLAST of mRNA_C-tenellus_contig7098.2.1 vs. uniprot
Match: A0A6H5GIV9_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GIV9_9HEMI) HSP 1 Score: 61.6 bits (148), Expect = 4.910e-8 Identity = 36/103 (34.95%), Postives = 53/103 (51.46%), Query Frame = 1 Query: 22 LVTSVGVGREREEWILDSAASCHVTNMITHMTNYKPCVGNERVVTASRNSFCIAGHGDLTILFPSRDNKEVEILLQNVAHVPDLGFNLFSCQAAADKGAKGIF 330 LV + V W++DSAAS H+T +TN + V+ A+ A GD+ I+F D + E+++ NV++VPDL NL S A KG + IF Sbjct: 70 LVAAFMVSASDTTWLVDSAASGHMTGRKDWLTNSSTANSGQTVLLANGQQLTTAESGDVHIVF---DGNDEEMVISNVSYVPDLNVNLLSVDALVKKGHEVIF 169
BLAST of mRNA_C-tenellus_contig7098.2.1 vs. uniprot
Match: A0A7N2RB38_QUELO (Uncharacterized protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2RB38_QUELO) HSP 1 Score: 61.6 bits (148), Expect = 5.370e-8 Identity = 44/127 (34.65%), Postives = 60/127 (47.24%), Query Frame = 1 Query: 13 NECLVTSVGVGREREEWILDSAASCHVTNMITHMTNYKPCVGNERVVTASRNSFC-IAGHGDLTILFPSRDNKEVEILLQNVAHVPDLGFNLFSCQAAADKGAKGIFTASSFSLLDGVLNFTRDPGC 390 N C+V+ V EW++DSAASCHVT T+YK GN V +S+ I G GD+ + R N ++L++V HVPD+ NL S +G F + L G L R C Sbjct: 150 NCCIVSDPYV-----EWVIDSAASCHVTPRNELFTSYK--AGNFGRVKMGNDSYADIVGIGDIYV----RANTRYTLILKDVRHVPDIRLNLISTHVLDKEGYGNYFRDGKWRLSKGSLVLARGKIC 265
BLAST of mRNA_C-tenellus_contig7098.2.1 vs. uniprot
Match: UPI0007381C27 (uncharacterized protein LOC107046418 n=1 Tax=Diachasma alloeum TaxID=454923 RepID=UPI0007381C27) HSP 1 Score: 60.5 bits (145), Expect = 1.020e-7 Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 1 Query: 55 EEWILDSAASCHVTNMITHMTNYKPCVGNERVVTASRNSFCIAGHGDLTILFPSRDNKE-VEILLQNVAHVPDLGFNLFSCQAAADKGAKGIFTASSFS 348 E+W LDSAAS H++ N +P E+++ + GD+ +L + D +E V +QN+ +VPD+ FNLFS +AA DKG + T++ S Sbjct: 235 EDWYLDSAASSHMSPRKEWFVNLEPLNFPEQIMIGDGKVIIRSARGDINVL--AYDGEEWVPKHIQNILYVPDIRFNLFSTEAATDKGLLHVATSTGAS 331
BLAST of mRNA_C-tenellus_contig7098.2.1 vs. uniprot
Match: A0A7N2RBS3_QUELO (Uncharacterized protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2RBS3_QUELO) HSP 1 Score: 58.5 bits (140), Expect = 6.140e-7 Identity = 39/112 (34.82%), Postives = 55/112 (49.11%), Query Frame = 1 Query: 58 EWILDSAASCHVTNMITHMTNYKPCVGNERVVTASRNSFC-IAGHGDLTILFPSRDNKEVEILLQNVAHVPDLGFNLFSCQAAADKGAKGIFTASSFSLLDGVLNFTRDPGC 390 EW++DSAASCHVT +YK GN V +S+ I G GD+ + R N ++L++V HVP++ NL S +G F + L G L F R+ C Sbjct: 82 EWVIDSAASCHVTPRKELFISYKG--GNFGRVKIGNDSYVDIVGIGDICV----RANTGYTLILKDVRHVPNIRLNLISTHVLDKEGYDNYFHDGKWRLSKGSLVFAREKIC 187
BLAST of mRNA_C-tenellus_contig7098.2.1 vs. uniprot
Match: A0A2N9HS85_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HS85_FAGSY) HSP 1 Score: 57.0 bits (136), Expect = 2.100e-6 Identity = 38/113 (33.63%), Postives = 53/113 (46.90%), Query Frame = 1 Query: 55 EEWILDSAASCHVTNMITHMTNYKPCVGNERVVTASRNSFC-IAGHGDLTILFPSRDNKEVEILLQNVAHVPDLGFNLFSCQAAADKGAKGIFTASSFSLLDGVLNFTRDPGC 390 +EW++DSAAS HVT T+YK VGN V S+ I G GD+ + N + L++V H+PD+ NL S +G + + L G L F R C Sbjct: 115 DEWVIDSAASYHVTPRREFFTSYK--VGNVGRVKMGNKSYADIVGIGDICV----ETNTGYTLKLKDVRHIPDMHLNLISISVLDKEGYESHLGNGKWKLFKGSLVFARGKIC 221
BLAST of mRNA_C-tenellus_contig7098.2.1 vs. uniprot
Match: A0A2N9FA33_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FA33_FAGSY) HSP 1 Score: 55.8 bits (133), Expect = 5.340e-6 Identity = 41/129 (31.78%), Postives = 57/129 (44.19%), Query Frame = 1 Query: 7 GANECLVTSVGVGREREEWILDSAASCHVTNMITHMTNYKPCVGNERVVTASRNSFC-IAGHGDLTILFPSRDNKEVEILLQNVAHVPDLGFNLFSCQAAADKGAKGIFTASSFSLLDGVLNFTRDPGC 390 G +EC V +EW++DSAAS HVT T+YK GN V S+ I G GD+ + N + L++V H+PD+ NL S +G + + L G L F R C Sbjct: 225 GEDECC----HVADPYDEWVIDSAASYHVTPRREFFTSYK--TGNLGRVKMENKSYADIVGIGDICV----ETNTGYTLKLKDVRHIPDMRLNLISVSVLDKEGYESHLGNGKWKLFKGSLVFARGKIC 343
BLAST of mRNA_C-tenellus_contig7098.2.1 vs. uniprot
Match: A0A2N9IWX1_FAGSY (Uncharacterized protein n=7 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IWX1_FAGSY) HSP 1 Score: 55.8 bits (133), Expect = 5.380e-6 Identity = 41/129 (31.78%), Postives = 57/129 (44.19%), Query Frame = 1 Query: 7 GANECLVTSVGVGREREEWILDSAASCHVTNMITHMTNYKPCVGNERVVTASRNSFC-IAGHGDLTILFPSRDNKEVEILLQNVAHVPDLGFNLFSCQAAADKGAKGIFTASSFSLLDGVLNFTRDPGC 390 G +EC V +EW++DSAAS HVT T+YK GN V S+ I G GD+ + N + L++V H+PD+ NL S +G + + L G L F R C Sbjct: 257 GEDECC----HVADPYDEWVIDSAASYHVTPRREFFTSYK--AGNLGRVKMGNKSYADIVGIGDICV----ETNTGYTLKLKDVRHIPDMRLNLISVSVLDKEGYESHLGNGKWKLFKGSLVFARGKIC 375
BLAST of mRNA_C-tenellus_contig7098.2.1 vs. uniprot
Match: A0A2N9IAD6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IAD6_FAGSY) HSP 1 Score: 55.5 bits (132), Expect = 7.180e-6 Identity = 41/129 (31.78%), Postives = 57/129 (44.19%), Query Frame = 1 Query: 7 GANECLVTSVGVGREREEWILDSAASCHVTNMITHMTNYKPCVGNERVVTASRNSFC-IAGHGDLTILFPSRDNKEVEILLQNVAHVPDLGFNLFSCQAAADKGAKGIFTASSFSLLDGVLNFTRDPGC 390 G +EC V +EW++DSAAS HVT T+YK GN V S+ I G GD+ + N + L++V H+PD+ NL S +G + + L G L F R C Sbjct: 257 GEDECC----HVADPYDEWVIDSAASYHVTPRREFFTSYK--AGNLGRVKMGNKSYADIVGIGDICV----ETNTGYTLKLKDVRHIPDMCLNLISVSVLDKEGYESHLGNGKWKLFKGSLVFARGKIC 375
BLAST of mRNA_C-tenellus_contig7098.2.1 vs. uniprot
Match: A0A146HJ32_MYCCL (CCHC-type domain-containing protein (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HJ32_MYCCL) HSP 1 Score: 55.1 bits (131), Expect = 8.690e-6 Identity = 29/81 (35.80%), Postives = 43/81 (53.09%), Query Frame = 1 Query: 49 EREEWILDSAASCHVTNMITHMTNYKPCVGNERVVTASRNSFCIAGHGDLTILFPSRDNKEVEILLQNVAHVPDLGFNLFS 291 E E +LDS A+ H+T + NY + + A + F G GDLT++ P+ + KEV++ + NV H P LG L S Sbjct: 409 EYEPVVLDSGATQHMTPNRDLLKNYS-AIKPRAITAADQGVFHAVGSGDLTVVIPNGEGKEVKVTIHNVLHAPKLGATLLS 488 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7098.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7098.2.1 >prot_C-tenellus_contig7098.2.1 ID=prot_C-tenellus_contig7098.2.1|Name=mRNA_C-tenellus_contig7098.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=166bp KCGANECLVTSVGVGREREEWILDSAASCHVTNMITHMTNYKPCVGNERVback to top mRNA from alignment at C-tenellus_contig7098:2874..3373+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7098.2.1 ID=mRNA_C-tenellus_contig7098.2.1|Name=mRNA_C-tenellus_contig7098.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=500bp|location=Sequence derived from alignment at C-tenellus_contig7098:2874..3373+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7098:2874..3373+ >mRNA_C-tenellus_contig7098.2.1 ID=mRNA_C-tenellus_contig7098.2.1|Name=mRNA_C-tenellus_contig7098.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=498bp|location=Sequence derived from alignment at C-tenellus_contig7098:2874..3373+ (Choristocarpus tenellus KU2346)back to top |