mRNA_C-tenellus_contig7007.1.3 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7007.1.3 vs. uniprot
Match: A0A6H5JTR0_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTR0_9PHAE) HSP 1 Score: 247 bits (631), Expect = 3.080e-70 Identity = 124/213 (58.22%), Postives = 155/213 (72.77%), Query Frame = 2 Query: 2 NLKLVMDNDGAHNLGLTFGGLDLCFVEGGGKGSEAVDPDTEVNDANKALYASLAVESRTYGRWCRQARALSSGIGRVVPLRLLCMFTENELGLLLAGPGEIDPEDWQRHTIFEGYASPQLQGWFWAFVTSLTLEEKSLLLKFATGCARLPVGGFAAL-PKNFKVVMREFDEQRPLPMAATCFFMLKMPDYPDKDTLERSLLVAIRHGASGFAF 637 +L +++ +G L FG L L F +E +DPD V D NKALYA LA+ES+T GRW +QA+AL+ G+ R+VPL LL MFTENELGLLLAGPG+IDP DW+R+ F G S L+ WFW V SLT EE+SLLL+FATGC+RLP GGF L P+ F V M ++D +RPLPMAATCF+MLK+P YPD +L ++LLVAIRHGA+GF F Sbjct: 1594 SLMQILETEGVDQFCLQFGDLALNFCAD----TEGIDPDDAVTDENKALYAKLALESKTAGRWRKQAKALAHGMRRLVPLGLLKMFTENELGLLLAGPGDIDPGDWERNANFTGEPSAMLRRWFWNVVRSLTKEERSLLLQFATGCSRLPAGGFRGLAPRTFTVAMIDYDPERPLPMAATCFYMLKLPRYPDLYSLRKNLLVAIRHGAAGFEF 1802
BLAST of mRNA_C-tenellus_contig7007.1.3 vs. uniprot
Match: D7FPN0_ECTSI (HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPN0_ECTSI) HSP 1 Score: 243 bits (619), Expect = 1.230e-68 Identity = 124/216 (57.41%), Postives = 155/216 (71.76%), Query Frame = 2 Query: 2 NLKLVMDNDGAHNLGLTFGGLDL--CFVEGGGKGSEAVDPDTEVNDANKALYASLAVESRTYGRWCRQARALSSGIGRVVPLRLLCMFTENELGLLLAGPGEIDPEDWQRHTIFEGYASPQLQGWFWAFVTSLTLEEKSLLLKFATGCARLPVGGFAAL-PKNFKVVMREFDEQRPLPMAATCFFMLKMPDYPDKDTLERSLLVAIRHGASGFAFS 640 +L +++ +G L FG L L C G +DPD V D NKALYA LA+ES+T GRW +QA+AL+ G+ R+VPL LL MFTENELGLLLAGPG+IDP DW+R+ F G + L+ WFW V SLT EE+SLLL+FATGC+RLP GGF L P+ F V M ++D +RPLPMAATCF+MLK+P YPD +L ++LLVAIRHGA+GF FS Sbjct: 1481 SLMQILETEGVGQFCLQFGDLALNSCADTAG------IDPDDAVTDENKALYAKLALESKTTGRWRKQAKALAHGMRRLVPLGLLKMFTENELGLLLAGPGDIDPGDWERNAHFTGEPTAMLRRWFWNVVRSLTKEERSLLLQFATGCSRLPAGGFRGLAPRTFTVAMIDYDPERPLPMAATCFYMLKLPRYPDLYSLRKNLLVAIRHGAAGFEFS 1690
BLAST of mRNA_C-tenellus_contig7007.1.3 vs. uniprot
Match: UPI001CF2C325 (E3 ubiquitin-protein ligase HACE1-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF2C325) HSP 1 Score: 135 bits (339), Expect = 8.680e-34 Identity = 72/183 (39.34%), Postives = 108/183 (59.02%), Query Frame = 2 Query: 110 DPDTEVNDANKALYASLAVESRTYGRWCRQARALSSGIGRVVPLRLLCMFTENELGLLLAGPGEIDPEDWQRHTIFEGYASPQLQ-GWFWAFVTSLTLEEKSLLLKFATGCARLPVGGFAALP-----KNFKVVMREFDEQRPLPMAATCFFMLKMPDYPDKDTLERSLLVAIRHGASGFAFS 640 D D ++ D NK YA L + + + + G+ V+P LL +FT +E LL+ G +ID DW+ +T ++G++S + WFW V+ L EEK+LLLKF+TG +P+GGFA+L F V+ + ++ +PMA+TCF MLK+ Y + L+ LL+AIRHGA GF+FS Sbjct: 109 DVDRKLTDNNKEEYAKLVSQLKLETLVKEEVAEFAGGLNEVIPRELLSLFTADEFSLLIGGVAKIDVSDWKSNTKYDGWSSTDDEISWFWGVVSQLKEEEKALLLKFSTGSPCVPIGGFASLTGLGGATRFTVL--KIEDVNKIPMASTCFNMLKLSRYSSEKHLKDKLLIAIRHGAEGFSFS 289
BLAST of mRNA_C-tenellus_contig7007.1.3 vs. uniprot
Match: A0A4D9CRJ9_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRJ9_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.700e-31 Identity = 90/249 (36.14%), Postives = 132/249 (53.01%), Query Frame = 2 Query: 2 NLKLVMDNDGAHNLGLTFGGLDLCFVEGG-GKGSEAVDPDT----------EVNDANKALYASLAVESRTYGRWCRQARALSSGIGRVVPL---RLLCMFTENELGLLLAGPGEIDPEDWQRHTIFE------------GYASP----------QLQGWFWAFVTSLTLEEKSLLLKFATGCARLPVGGFAALPKNFKVVMREFDEQRPLPMAATCFFMLKMPDYPDKDTLERSLLVAIRHGASGFAFS 640 +L V+ + A +LGL+F +V+ G G+ AV + EV DANK + + + + + ARAL G+ V+ RLL ++T EL L G ++ +W+ HT G SP ++ WFWAF+ +L+ E+K+LLLKFATG +RLPVGGF+AL F + FD RPLP+AATCF +LK+P YP + LE+ +L+A+R G+ GFAF+ Sbjct: 177 SLSCVLATEKAEHLGLSFTHSRPVWVQKGTDSGARAVAVEEMPLCEGGQAREVTDANKEEFVVRLLHAY-FQAYLPAARALRRGLLDVLRPSNGRLLKIYTAMELATLSGGVSDLPVSEWRTHTTVSSALLHLSSSPPSGPPSPPVGFPTRHGRKVLTWFWAFLETLSKEDKALLLKFATGLSRLPVGGFSALQPPFTLQPLAFDSARPLPIAATCFHVLKLPLYPTAEELEKHVLLALRFGSEGFAFA 424
BLAST of mRNA_C-tenellus_contig7007.1.3 vs. uniprot
Match: UPI00077B012B (E3 ubiquitin-protein ligase HUWE1-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077B012B) HSP 1 Score: 124 bits (310), Expect = 1.160e-30 Identity = 67/170 (39.41%), Postives = 100/170 (58.82%), Query Frame = 2 Query: 149 YASLAVESRTYGRWCRQARALSSGIGRVVPLRLLCMFTENELGLLLAGPGEIDPEDWQRHTIFEGYASPQLQ-GWFWAFVTSLTLEEKSLLLKFATGCARLPVGGFAALP-----KNFKVVMREFDEQRPLPMAATCFFMLKMPDYPDKDTLERSLLVAIRHGASGFAFS 640 YA L + + + + G+ V+P LL +FT +E LL+ G +ID DW+ +T ++G+ S + WFW V+ L EEK+LLLKF+TG +P+GGFA+L F V+ + ++ +PMA+TCF MLK+ Y + L+ LL+AIRHGA GF+FS Sbjct: 21 YAKLVSQLKLETLVKDEVAEFAGGLNEVIPRELLSLFTADEFSLLIGGVTKIDVSDWKSNTKYDGWFSTDNEISWFWGVVSQLKEEEKALLLKFSTGSPCVPIGGFASLTGLGGATRFTVL--KIEDVNKIPMASTCFNMLKLSRYSSEKHLKDKLLIAIRHGAEGFSFS 188
BLAST of mRNA_C-tenellus_contig7007.1.3 vs. uniprot
Match: UPI0009E55D21 (uncharacterized protein LOC110065378 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E55D21) HSP 1 Score: 130 bits (328), Expect = 6.130e-30 Identity = 71/183 (38.80%), Postives = 104/183 (56.83%), Query Frame = 2 Query: 110 DPDTEVNDANKALYASLAVESRTYGRWCRQARALSSGIGRVVPLRLLCMFTENELGLLLAGPGEIDPEDWQRHTIFEGYA-SPQLQGWFWAFVTSLTLEEKSLLLKFATGCARLPVGGFAAL-----PKNFKVVMREFDEQRPLPMAATCFFMLKMPDYPDKDTLERSLLVAIRHGASGFAFS 640 D D ++ D NK Y L + + + S G+ V+P L +FT +E LL+ G ++D EDW++HT+++ + WFW V L EEK+LL+KF+TG +P+GGFAAL P F ++ E + +PMA+TCF MLK+ Y + L+ LL+AIRHGA GF+FS Sbjct: 1265 DSDKKLTDDNKEEYTKLVSQFKLETSIKDEVAEFSGGLNEVIPRDFLSLFTADEFSLLINGVTKLDVEDWKKHTVYKACTVEHDVIQWFWNVVWQLKEEEKALLMKFSTGSPCVPLGGFAALTGLSGPTKFTILKTEGLNK--IPMASTCFNMLKLTSYSSEKQLKDKLLIAIRHGAEGFSFS 1445
BLAST of mRNA_C-tenellus_contig7007.1.3 vs. uniprot
Match: A0A0K3CH81_RHOTO (E3 ubiquitin-protein ligase n=4 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A0K3CH81_RHOTO) HSP 1 Score: 130 bits (326), Expect = 9.330e-30 Identity = 81/211 (38.39%), Postives = 111/211 (52.61%), Query Frame = 2 Query: 2 NLKLVMDNDGAHNLGLTFGGLDLCFVEGGGKGSEAVDPDTEVNDANKALYASLAVESRTYGRWCRQARALSSGIGRVVPLRLLCMFTENELGLLLAGPGEIDPEDWQRHTIFEGYA-SPQLQGWFWAFVTSLTLEEKSLLLKFATGCARLPVGGFAAL-----PKNFKVVMREFDEQRPLPMAATCFFMLKMPDYPDKDTLERSLLVAIRH 616 +L +++ND + TF D F E + D EV + NK Y L VE R GR Q A SG ++P L+ +F E EL LL+ G EID +DW +HT + G+ S ++ WFW V S E+KS LL+FATG +R+PV GF L P+ F + + E LP + TCF L +P YPD +TLE+ L +AI Sbjct: 605 SLTWILENDITDVIENTFSAEDDRFGETVTIDLKPGGRDIEVTNDNKKEYVQLIVEWRIQGRVKDQFSAFLSGFNELIPQELINVFDERELELLIGGMSEIDVDDWVKHTDYRGFTQSDEVVQWFWKAVKSWPTEKKSRLLQFATGTSRIPVNGFKDLQGSDGPRRF--TLEKSGEITQLPKSHTCFNRLDLPPYPDYETLEKKLTIAIEE 813
BLAST of mRNA_C-tenellus_contig7007.1.3 vs. uniprot
Match: A0A7R9XPK2_9CHLO (HECT-type E3 ubiquitin transferase n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A7R9XPK2_9CHLO) HSP 1 Score: 120 bits (300), Expect = 4.960e-29 Identity = 66/173 (38.15%), Postives = 97/173 (56.07%), Query Frame = 2 Query: 134 ANKALYASLAVESRTYGRWCRQARALSSGIGRVVPLRLLCMFTENELGLLLAGPGEIDPEDWQRHTIFEG--YASPQLQGWFWAFVTSLTLEEKSLLLKFATGCARLPVGGFAALPKNFKVVMREFDEQRP----LPMAATCFFMLKMPDYPDKDTLERSLLVAIRHGASGFA 634 +N A Y +TYG+ Q R ++ G+ V+P M +E LLLAG E+D W+ T + G +AS WFW + SL+ ++ L++ FATG +PVGGFAA F ++ + + LP AATCF +L++P Y K LER++L+A+RHG+SGFA Sbjct: 28 SNAAEYVYRLARFKTYGQCLWQCRRIARGLDAVLPREARRMLESHEAALLLAGESEVDVAAWRSATKYTGGYHASSAQIRWFWELMESLSHTDRRLVVWFATGSPSVPVGGFAASASGFTIMALDSSRTQGGGDLLPTAATCFHLLRLPRYATKARLERAVLLAVRHGSSGFA 200
BLAST of mRNA_C-tenellus_contig7007.1.3 vs. uniprot
Match: A0A2B4RC73_STYPI (E3 ubiquitin-protein ligase HACE1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RC73_STYPI) HSP 1 Score: 127 bits (319), Expect = 9.340e-29 Identity = 70/183 (38.25%), Postives = 103/183 (56.28%), Query Frame = 2 Query: 110 DPDTEVNDANKALYASLAVESRTYGRWCRQARALSSGIGRVVPLRLLCMFTENELGLLLAGPGEIDPEDWQRHTIFEGY-ASPQLQGWFWAFVTSLTLEEKSLLLKFATGCARLPVGGFAAL-----PKNFKVVMREFDEQRPLPMAATCFFMLKMPDYPDKDTLERSLLVAIRHGASGFAFS 640 D D ++ D NK Y+ + + + S G+ V+P L +FT +E LL+ G ++D DW++HT ++ A + WFW VT L EEK+LL+KF+TG +P+GGFAAL P F + + + +PMA+TCF MLK+ Y + L+ LL+AIRHGA GF+FS Sbjct: 1235 DCDKKLTDDNKEEYSRFVSQFKLEKSIKEEVGEFSGGLHEVIPREFLSLFTADEFSLLINGVAKLDVGDWKKHTEYKQCTAEDDVIKWFWNIVTPLKEEEKALLIKFSTGSPCVPLGGFAALTGLSGPTKFTI--SKIEGLNKIPMASTCFNMLKLTSYSSEKHLKDKLLIAIRHGAEGFSFS 1415
BLAST of mRNA_C-tenellus_contig7007.1.3 vs. uniprot
Match: A0A7S0SCQ6_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SCQ6_9CHLO) HSP 1 Score: 120 bits (301), Expect = 1.080e-28 Identity = 81/228 (35.53%), Postives = 113/228 (49.56%), Query Frame = 2 Query: 62 LDLCFVEGGGKGSEAVDPDTEVNDANKALYASLAVESRTYGRWCRQARALS-SGIGRVVPLRLLCMFTENELGLLLAGPGEIDPEDWQRHTIFEG---YASPQLQGWFWAFVTSLTLEEKSLLLKFATGCARLPVGGFAALPKNFKV----VMR---------------------------EFDEQRPLPMAATCFFMLKMPDYPDKDTLERSLLVAIRHGASGFAFS 640 +++ V GG A P V DANK Y +L + + C A A + +G+G ++ L LL +FT EL LL G +I +DW+ HT + G AS Q++ W W + L +E++LLLKF TG +R+PVGGFA L V VMR D+ LP +ATCF L++P+YP + LER + A+RHG GFAF Sbjct: 28 VEVALVPGG-----ATRP---VTDANKDEYVALCLRHKLRQVSCSAAAAATRAGVGELISLDLLRVFTAPELACLLGGEADISVQDWREHTTYGGGYCRASDQVK-WLWRLIDRLGPDERTLLLKFTTGSSRMPVGGFAMLQGMGGVQWFNVMRVPAERHRSNARAPRGXXXXXXXXXXXXXXDDVYALPTSATCFNTLRLPEYPTFEVLERQVTTALRHGCEGFAFG 246 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7007.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7007.1.3 >prot_C-tenellus_contig7007.1.3 ID=prot_C-tenellus_contig7007.1.3|Name=mRNA_C-tenellus_contig7007.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=209bp MDNDGAHNLGLTFGGLDLCFVEGGGKGSEAVDPDTEVNDANKALYASLAVback to top mRNA from alignment at C-tenellus_contig7007:726..4530+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7007.1.3 ID=mRNA_C-tenellus_contig7007.1.3|Name=mRNA_C-tenellus_contig7007.1.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3805bp|location=Sequence derived from alignment at C-tenellus_contig7007:726..4530+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7007:726..4530+ >mRNA_C-tenellus_contig7007.1.3 ID=mRNA_C-tenellus_contig7007.1.3|Name=mRNA_C-tenellus_contig7007.1.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=627bp|location=Sequence derived from alignment at C-tenellus_contig7007:726..4530+ (Choristocarpus tenellus KU2346)back to top |