mRNA_C-tenellus_contig6775.1.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig6775.1.2
Unique NamemRNA_C-tenellus_contig6775.1.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A835YIA3_9STRA (WD40 repeat protein flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA3_9STRA)

HSP 1 Score: 315 bits (806), Expect = 4.220e-95
Identity = 172/299 (57.53%), Postives = 201/299 (67.22%), Query Frame = 1
Query:    7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAESNARIGGXXXXXXXXXXXXXXXXEDIGDIRGDKKEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQARRGRD 903
            MFI+L+KKIAIP G KLHSLAWNP QGWIACGG SGL KVLKLE ATG+K  +              A S+LSMNQTLEGH+GSV+CVTWN+ YSKLTT DE GLIIVWMLHKG+W+EEMINNR KS V+DMKWTS+GQKICI+Y+DGAVIVGSVDGNRLWGKEL+  LQ+VE                     IYDA G +++ M LPA + LAA S     G           XXXX E      G  + G+G S+P++ +A IDWYDGAEG++HQ  PTL +A   G VQ  R  D
Sbjct:    1 MFIFLSKKIAIPKGIKLHSLAWNPDQGWIACGGESGLMKVLKLESATGQKDPQK-------------AGSDLSMNQTLEGHNGSVMCVTWNSNYSKLTTSDENGLIIVWMLHKGMWYEEMINNRGKSVVRDMKWTSDGQKICIVYEDGAVIVGSVDGNRLWGKELDIYLQHVEXXXXXXXXXXXXXXXXXH---IYDAAGAKVKLMQLPAAT-LAAASKPPSDGSARESKHAGDDXXXXDEGYARHNGTSRGGNGASSPAL-IADIDWYDGAEGYVHQAAPTLAIAFVNGTVQIGRHTD 281          
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A7S0WI31_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WI31_9CHLO)

HSP 1 Score: 281 bits (719), Expect = 2.000e-92
Identity = 140/208 (67.31%), Postives = 157/208 (75.48%), Query Frame = 1
Query:    7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMAL 630
            MFIYL+KKIAIPNG +L  ++WN  QGWIACGG +GL KVLKLE AT  K  K           GG AASNLSMNQTLEGH+GSV+ V WN  Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS V+DMKWTS+GQKICI+Y+DGAVIVGSVDGNRLWGKEL   L  VEWSPDGR    +LF T+ GEV +YD  G  I  + L
Sbjct:    1 MFIYLSKKIAIPNGVRLKCVSWNSEQGWIACGGDNGLLKVLKLESATPTKDAKAK---------GGPAASNLSMNQTLEGHNGSVMVVNWNENYRKLTTSDQYGLIIVWMLHKGMWFEEMINNRNKSVVRDMKWTSDGQKICIVYEDGAVIVGSVDGNRLWGKELALSLALVEWSPDGR---MVLFCTVQGEVHLYDCNGNAITKLPL 196          
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A7S2W6K2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6K2_9STRA)

HSP 1 Score: 305 bits (782), Expect = 7.930e-92
Identity = 165/300 (55.00%), Postives = 195/300 (65.00%), Query Frame = 1
Query:    7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDG-GRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAESNARIGGXXXXXXXXXXXXXXXXEDIGDIRGDKKEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQARRGRD 903
            MFIYL+KKIAIPN  KL  L+WNP QGWIACGG +GL KVLKLE         +TAG G  R+  G AA SNLSMNQTL+GH GSV+CVTWNA + KLTT DE GLIIVWMLH+G+W+EEMINNRN+S V+DMKWT+NG KICI+Y+DGAVIVGSVDGNRLWGKELE  L  VEWSPD R    ILFV+    V  YDA+G +++ +ALP L +                                 RG + E +  ++  ++VAGI WYDG EG      PTL +A   G VQ  RG D
Sbjct:   25 MFIYLSKKIAIPNQVKLRCLSWNPDQGWIACGGDTGLLKVLKLE---------LTAGKGESRSQQGVAAPSNLSMNQTLDGHHGSVMCVTWNALHRKLTTSDETGLIIVWMLHQGMWYEEMINNRNRSVVRDMKWTANGSKICIVYEDGAVIVGSVDGNRLWGKELEMRLTFVEWSPDART---ILFVS-GDTVYAYDAEGNRVKQVALPELDQ--------------------------------DRGKEDEDEEAASSRVEVAGIHWYDGVEGQADPHAPTLAIAFRNGRVQISRGTD 279          
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: D7FWE2_ECTSI (WD40 repeat protein flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWE2_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 8.430e-92
Identity = 179/317 (56.47%), Postives = 202/317 (63.72%), Query Frame = 1
Query:    7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLE-----GATGRKHTKMTA--GDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAES---NARIGGXXXXXXXXXXXXXXXXEDI-------GDIR-GDKKEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQARRGRD 903
            MFIYL+KKIAIPNGTKL SLAWNP QGWIACGGS+GLTKVLKL+     GA G    ++ A  G G          SNLSMNQTLEGH+GSVVCVTWNATYSKLTTCDE GLIIVWMLHKGLWFEEMINNR+KSAV+DMKWTSNGQKICIIY DGAVIVGSVDGNRLWGKEL+ GLQN                                R M LP  + +  +S   N+   G             XXX          G+ + G +K G+G+     +V  +DWYDGAEG LH +VPTLC+AL+ G VQ  RG D
Sbjct:    1 MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAENGRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RAMTLPEGAEITPDSTGANSPTSGSKKKPAFLRDEKDXXXXXXXXNEAKGGEGKNGGRKRGEGKKG---RVIFVDWYDGAEGLLHPQVPTLCIALDGGFVQLSRGVD 311          
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A067D149_SAPPC (ANAPC4_WD40 domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D149_SAPPC)

HSP 1 Score: 299 bits (765), Expect = 1.350e-89
Identity = 160/298 (53.69%), Postives = 189/298 (63.42%), Query Frame = 1
Query:    7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAESNARIGGXXXXXXXXXXXXXXXXEDIGDIRGDKKEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQARRGR 900
            MFI+L+KKIAIPNG +L   +WNP  GWIACGG SGL KVLKLE AT  K  K T G         AA SNL+MNQ+L+GH GSVVC TWNA Y KLTT DE GLIIVWM+H+G+WFEEMINNRNKS V+DMKW+S+GQKICI Y+DGAVIVGSVDGNRLWGKE++  L  VEWSPDG+    ++FVT  GEV I+D  G +I T+ L A+                                     DKK          K+ G+ WYDG EGH+ ++ PTL +A   G VQ  RGR
Sbjct:    1 MFIFLSKKIAIPNGAQLCCASWNPEHGWIACGGQSGLLKVLKLESAT-SKEGKGTRGI--------AAQSNLTMNQSLDGHAGSVVCATWNANYKKLTTSDENGLIIVWMMHRGMWFEEMINNRNKSVVKDMKWSSDGQKICIAYEDGAVIVGSVDGNRLWGKEMKVDLCFVEWSPDGKH---LVFVTKEGEVSIHDGSGSKIGTLPLYAVDAK----------------------------------DKK---------YKIIGLHWYDGCEGHVSEDAPTLAIAFADGKVQITRGR 243          
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A2J7ZHB6_9CHLO (WD repeat domain-containing protein (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZHB6_9CHLO)

HSP 1 Score: 274 bits (700), Expect = 2.010e-89
Identity = 135/208 (64.90%), Postives = 154/208 (74.04%), Query Frame = 1
Query:    7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMAL 630
            MFIYL+KKIAIPN  KL  ++WN  QGWIACGG SGL KVL+L+G T ++      G        GAA  NLS+NQTLEGH+G+VVCV WN  + KLTT DE GLIIVWMLHKG+WFEEMINNRNKS V+DMKWTSNG+KICIIY+DGAVIVGSVDGNRLWGKEL   L  VEWSPDGR    +LF T  GE  +YD  G  +  + L
Sbjct:    1 MFIYLSKKIAIPNNVKLRCISWNTDQGWIACGGESGLLKVLRLDGTTSKEVKGKKEG--------GAAGGNLSLNQTLEGHNGAVVCVCWNNAFQKLTTSDEFGLIIVWMLHKGMWFEEMINNRNKSVVKDMKWTSNGEKICIIYEDGAVIVGSVDGNRLWGKELGMELALVEWSPDGRL---LLFATPQGECQVYDGNGNGVAKVPL 197          
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A388K193_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K193_CHABU)

HSP 1 Score: 299 bits (765), Expect = 4.990e-89
Identity = 177/297 (59.60%), Postives = 200/297 (67.34%), Query Frame = 1
Query:    7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGA-AASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAESNARIGGXXXXXXXXXXXXXXXXEDIGDIRGDKKEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQARR 894
            MF+YL+KKIAIPNG KL S+AWN  QGWIACGG SGL KVLKLE    R   K +   GG    GGA AA+NLSMNQTLEGH+G+VV V WN  Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS V+DMKWTS+GQKICI+Y+DGAVIVGSVDGNRLWGKEL   L  VEWSPDGR    ILF T+ GE  I+D  G Q+    LP LS    E   R     XXXXXXXXXXXXXX                S+    + G+DWYDG EG+     PTL + +  G +Q  R
Sbjct:    1 MFVYLSKKIAIPNGVKLRSVAWNSEQGWIACGGDSGLLKVLKLESGPARD-AKASGRKGGATAAGGAGAANNLSMNQTLEGHNGAVVVVQWNENYRKLTTSDQYGLIIVWMLHKGMWFEEMINNRNKSVVKDMKWTSDGQKICIVYEDGAVIVGSVDGNRLWGKELPLQLALVEWSPDGRL---ILFCTLEGECYIFDQNGNQMAR--LPLLSDSVVEQG-RTHNNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSKTAIIGVDWYDGLEGYSDPNSPTLAIGMANGKLQLMR 290          
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A7S0LCH0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LCH0_9EUKA)

HSP 1 Score: 281 bits (720), Expect = 1.190e-88
Identity = 145/219 (66.21%), Postives = 166/219 (75.80%), Query Frame = 1
Query:    7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAESN 663
            MFIYL+KKIAIPNG KL SL+WN V GWI CGG +GL KVLKL+  +GR   K           G AA SNLSMNQTLEGH+GSVVCV WN +Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS V+ MKWT++GQ+ICIIY+DGAVIVGSVDGNRLWG+EL+T L +VEWSPDGR    ILF TM  EV +YDA G  I  M L  L   AA+++
Sbjct:   29 MFIYLSKKIAIPNGVKLKSLSWNGVNGWIVCGGENGLLKVLKLD--SGRSQDKAK---------GLAAPSNLSMNQTLEGHNGSVVCVCWNESYRKLTTSDQYGLIIVWMLHKGIWFEEMINNRNKSTVRGMKWTADGQRICIIYEDGAVIVGSVDGNRLWGRELKTQLAHVEWSPDGRN---ILFCTMQCEVHVYDAIGNFISKMPLYCLDDAAAQTS 233          
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A7S0HEY4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HEY4_9EUKA)

HSP 1 Score: 270 bits (691), Expect = 1.200e-87
Identity = 140/216 (64.81%), Postives = 158/216 (73.15%), Query Frame = 1
Query:    7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAA 654
            MF+YL+KKIAIPNG KL SL WN V GWI CGG +GL KVLKL+  +GR   K           G AA SNLSMNQTLEGH+GSV+CV WN  Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS V+ MKWT +GQ+ICIIY+DGAVIVGSVDGNRLWGKEL+  L +V+WSPDGR    ++F T   EV IYDA G  I  M L  L   AA
Sbjct:   12 MFVYLSKKIAIPNGVKLKSLNWNTVNGWIVCGGENGLLKVLKLD--SGRTTDKSK---------GMAAPSNLSMNQTLEGHNGSVMCVCWNENYRKLTTSDQYGLIIVWMLHKGMWFEEMINNRNKSTVRGMKWTPDGQRICIIYEDGAVIVGSVDGNRLWGKELKMQLAHVQWSPDGR---SLIFCTPQCEVHIYDAVGNYISKMNLYCLDDAAA 213          
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A7S0LYC8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LYC8_9CRYP)

HSP 1 Score: 266 bits (680), Expect = 3.420e-85
Identity = 147/293 (50.17%), Postives = 168/293 (57.34%), Query Frame = 1
Query:    7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAESNARIGGXXXXXXXXXXXXXXXXEDIGDIRGDKKEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQ 885
            MFIYL KKIAIPNG  L    WN  QGWIACGG  GL KVLKLE A   K   +            A  SNL+MNQTLEGH   V+C  WN  + KLTT DE GLIIVWMLHKGLWFEEMINNRNKS V+DMKW ++GQKICI+Y+DGAVIVGSVDGNRLWGK+L+  LQ VEWSPDG+    ILFVT  G V +YD  G  +    L      + +S A                                          VAG+ WY+G EG +    PTL +A + G VQ
Sbjct:    2 MFIYLNKKIAIPNGVVLRCCYWNADQGWIACGGEGGLLKVLKLESAGKGKERGI------------AGTSNLTMNQTLEGHSEPVICAAWNEAFKKLTTSDESGLIIVWMLHKGLWFEEMINNRNKSVVRDMKWNADGQKICIVYEDGAVIVGSVDGNRLWGKDLKMQLQYVEWSPDGKL---ILFVTPQGVVHVYDGLGNFVSQAPL-----FSDDSTAT-----------------------------------------VAGLCWYNGLEGLVDPNAPTLAIAFDNGRVQ 233          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YIA3_9STRA4.220e-9557.53WD40 repeat protein flagellar associated protein n... [more]
A0A7S0WI31_9CHLO2.000e-9267.31Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A7S2W6K2_9STRA7.930e-9255.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D7FWE2_ECTSI8.430e-9256.47WD40 repeat protein flagellar associated protein n... [more]
A0A067D149_SAPPC1.350e-8953.69ANAPC4_WD40 domain-containing protein n=3 Tax=Sapr... [more]
A0A2J7ZHB6_9CHLO2.010e-8964.90WD repeat domain-containing protein (Fragment) n=1... [more]
A0A388K193_CHABU4.990e-8959.60Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A7S0LCH0_9EUKA1.190e-8866.21Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S0HEY4_9EUKA1.200e-8764.81Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A7S0LYC8_9CRYP3.420e-8550.17Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6775contigC-tenellus_contig6775:700..2566 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog112098.XP_008614002.1
PFAMsANAPC4_WD40,WD40
Model size903
Max annot lvl2759|Eukaryota
KEGG koko:K19674
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005856,GO:0005929,GO:0005930,GO:0006810,GO:0006928,GO:0006935,GO:0006996,GO:0007017,GO:0007018,GO:0008104,GO:0008150,GO:0008289,GO:0009605,GO:0009987,GO:0010970,GO:0015630,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030705,GO:0030990,GO:0030991,GO:0031503,GO:0032838,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035091,GO:0035721,GO:0036064,GO:0040011,GO:0042073,GO:0042221,GO:0042330,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0046907,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060271,GO:0061512,GO:0070727,GO:0070925,GO:0071840,GO:0097014,GO:0097730,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1905515
Exons5
Evalue3.96e-91
EggNOG OGsKOG2041@1|root,KOG2041@2759|Eukaryota
Descriptioncellular response to paclitaxel
Cds size897
COG categoryE
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6775.1.2prot_C-tenellus_contig6775.1.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig6775 700..2560 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789991.2516294-CDS-C-tenellus_contig6775:699..10481680789991.2516294-CDS-C-tenellus_contig6775:699..1048Choristocarpus tenellus KU2346CDSC-tenellus_contig6775 700..1048 -
1680789991.2632713-CDS-C-tenellus_contig6775:1359..15081680789991.2632713-CDS-C-tenellus_contig6775:1359..1508Choristocarpus tenellus KU2346CDSC-tenellus_contig6775 1360..1508 -
1680789991.272304-CDS-C-tenellus_contig6775:1701..18451680789991.272304-CDS-C-tenellus_contig6775:1701..1845Choristocarpus tenellus KU2346CDSC-tenellus_contig6775 1702..1845 -
1680789991.283884-CDS-C-tenellus_contig6775:1953..20911680789991.283884-CDS-C-tenellus_contig6775:1953..2091Choristocarpus tenellus KU2346CDSC-tenellus_contig6775 1954..2091 -
1680789991.2960036-CDS-C-tenellus_contig6775:2443..25601680789991.2960036-CDS-C-tenellus_contig6775:2443..2560Choristocarpus tenellus KU2346CDSC-tenellus_contig6775 2444..2560 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789991.3077204-UTR-C-tenellus_contig6775:2560..25661680789991.3077204-UTR-C-tenellus_contig6775:2560..2566Choristocarpus tenellus KU2346UTRC-tenellus_contig6775 2561..2566 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig6775.1.2

>prot_C-tenellus_contig6775.1.2 ID=prot_C-tenellus_contig6775.1.2|Name=mRNA_C-tenellus_contig6775.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=299bp
MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRK
HTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTC
DELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAV
IVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQG
KQIRTMALPALSRLAAESNARIGGGGRHSGKEDDDDEEDDEDIGDIRGDK
KEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQARRGRD
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mRNA from alignment at C-tenellus_contig6775:700..2566-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig6775.1.2 ID=mRNA_C-tenellus_contig6775.1.2|Name=mRNA_C-tenellus_contig6775.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1867bp|location=Sequence derived from alignment at C-tenellus_contig6775:700..2566- (Choristocarpus tenellus KU2346)
GAGAGTATGTTCATTTATCTGACCAAGAAAATCGCTATTCCCAATGGGAC GAAACTTCATAGCTTAGCGTGGAACCCAGTGCAAGGATGGATAGCGTGTG GTGGATCAAGTGGACTCACCAAGGTTTATGAAAAAGATCTTTGTACAGCC CTAGGCTTGCGGTGGAGTACCCTAATGACATCATATTTGAATCCCATAAT GCCTTTTGGTGGGTAGAATGCTTACACCTAGGGATAAAGGACGTCCAGAG TATTTCCTCCATGAGTCAGGGTTTTCTCTTTAATGAATAGCACCTCATTG AAGAAAATTCATTGATCATAGAATATCTTCCCAATAAACCCTAGCGAAGA GTTCCATTAGATCCGCCCTAAGGTATCTCTTTACCTACAAGGCCATGGCA CAACACCTGGATATTGAGCCACTGGTTCATACGCATTGATTGCCAAGGAT ATTCTCCACTCATACTTCGTTAAAGGTCCTCAAACTTGAGGGAGCTACAG GGAGAAAACATACCAAGATGACTGCAGGGGATGGAGGAAGAAACGGTGGG GGCGGAGCGGCAGCTTCAAATCTTAGCATGAATCAGACTCTTGAAGGCCA CGATGGATCCGTGGTGAGTAAAATCCTTGCATATAGTATAAATGTATTGC AGTCGATATTTCTGGCCATCTATGTCCTTCTGTTTCATTGTACTCTGCTA TCCTCATTCTTCGTCGAACAGGTTTGTGTGACGTGGAATGCGACATACTC AAAGCTCACCACATGTGACGAGCTAGGGCTCATTATCGTTTGGATGCTAC ACAAAGGGTTGTGGTTTGAGGAGATGATCAACAACAGAAACAAGTCTGCA GTGCAAGATATGAAGGTGAAAAACAATAGCAGTGACTTGAAAGTGGGCTG TGAGGCAATGTCTTTGCAGGAAAGTTTGCACCATAACCAAGCTATGACTC CCAGGGAATACACTGAAGAATCTCCTTGACCCAACCGTTTGTGTCAGTGT TTTTCCCTAGCACCCATACTCCTCATGCTCATTCAGGATCTCCCTATTTG ACTTCCAGTGGACCAGCAATGGTCAGAAAATATGCATAATTTATCAGGAT GGGGCAGTTATTGTCGGGTCAGTGGATGGCAACAGACTCTGGGGGAAAGA GCTTGAGACAGGGCTGCAAAACGTGGAATGGTCACCAGATGGTCGAAGGC AAGATCAGTATCTAAGATTGCACCAAGAGCTTTTCAAAGTAAAAGTCACA CACACAATAGACCTCCGCTTTTTCTACAATCTCAAGGCTATTGCGCAAGA CTTTCTCAACAATTTCTAGATAGACTTACAGTTGGTCATGTGTTTTTGAG GTATTTATTGCACACTAAAAAAACAGTGCGTATGTCCGCTACTAAAAAAA AAAATCAACGGTATCGCTATGCACCGCTGTTGGTAACGTGGCCTACACTC GCTCACTACTCACTCTGCAATCCAACTGCAAGTGTCCCATGCCCACCTGC TTCACATCCACACCACAGGATACTGTTTGTAACTATGGCTGGAGAGGTGT TGATCTACGATGCCCAGGGCAAGCAAATAAGGACTATGGCCCTACCTGCT CTCTCCCGCCTTGCTGCCGAGTCCAACGCTAGGATAGGGGGTGGTGGCAG GCACTCGGGGAAGGAAGATGATGACGACGAGGAGGATGACGAGGATATTG GTGACATAAGAGGAGACAAAAAGGAAGGGGACGGGAGAAGCGCTCCTTCT ATGAAGGTGGCGGGGATCGATTGGTATGACGGTGCAGAGGGCCACCTTCA CCAGGAGGTACCCACGCTCTGCGTTGCTCTGGAGAGAGGATTGGTGCAGG CAAGGAGGGGGAGGGAC
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Coding sequence (CDS) from alignment at C-tenellus_contig6775:700..2566-

>mRNA_C-tenellus_contig6775.1.2 ID=mRNA_C-tenellus_contig6775.1.2|Name=mRNA_C-tenellus_contig6775.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=897bp|location=Sequence derived from alignment at C-tenellus_contig6775:700..2566- (Choristocarpus tenellus KU2346)
ATGTTCATTTATCTGACCAAGAAAATCGCTATTCCCAATGGGACGAAACT
TCATAGCTTAGCGTGGAACCCAGTGCAAGGATGGATAGCGTGTGGTGGAT
CAAGTGGACTCACCAAGGTCCTCAAACTTGAGGGAGCTACAGGGAGAAAA
CATACCAAGATGACTGCAGGGGATGGAGGAAGAAACGGTGGGGGCGGAGC
GGCAGCTTCAAATCTTAGCATGAATCAGACTCTTGAAGGCCACGATGGAT
CCGTGGTTTGTGTGACGTGGAATGCGACATACTCAAAGCTCACCACATGT
GACGAGCTAGGGCTCATTATCGTTTGGATGCTACACAAAGGGTTGTGGTT
TGAGGAGATGATCAACAACAGAAACAAGTCTGCAGTGCAAGATATGAAGT
GGACCAGCAATGGTCAGAAAATATGCATAATTTATCAGGATGGGGCAGTT
ATTGTCGGGTCAGTGGATGGCAACAGACTCTGGGGGAAAGAGCTTGAGAC
AGGGCTGCAAAACGTGGAATGGTCACCAGATGGTCGAAGGCAAGATCAGA
TACTGTTTGTAACTATGGCTGGAGAGGTGTTGATCTACGATGCCCAGGGC
AAGCAAATAAGGACTATGGCCCTACCTGCTCTCTCCCGCCTTGCTGCCGA
GTCCAACGCTAGGATAGGGGGTGGTGGCAGGCACTCGGGGAAGGAAGATG
ATGACGACGAGGAGGATGACGAGGATATTGGTGACATAAGAGGAGACAAA
AAGGAAGGGGACGGGAGAAGCGCTCCTTCTATGAAGGTGGCGGGGATCGA
TTGGTATGACGGTGCAGAGGGCCACCTTCACCAGGAGGTACCCACGCTCT
GCGTTGCTCTGGAGAGAGGATTGGTGCAGGCAAGGAGGGGGAGGGAC
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