mRNA_C-tenellus_contig6775.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A835YIA3_9STRA (WD40 repeat protein flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA3_9STRA) HSP 1 Score: 315 bits (806), Expect = 4.220e-95 Identity = 172/299 (57.53%), Postives = 201/299 (67.22%), Query Frame = 1 Query: 7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAESNARIGGXXXXXXXXXXXXXXXXEDIGDIRGDKKEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQARRGRD 903 MFI+L+KKIAIP G KLHSLAWNP QGWIACGG SGL KVLKLE ATG+K + A S+LSMNQTLEGH+GSV+CVTWN+ YSKLTT DE GLIIVWMLHKG+W+EEMINNR KS V+DMKWTS+GQKICI+Y+DGAVIVGSVDGNRLWGKEL+ LQ+VE IYDA G +++ M LPA + LAA S G XXXX E G + G+G S+P++ +A IDWYDGAEG++HQ PTL +A G VQ R D Sbjct: 1 MFIFLSKKIAIPKGIKLHSLAWNPDQGWIACGGESGLMKVLKLESATGQKDPQK-------------AGSDLSMNQTLEGHNGSVMCVTWNSNYSKLTTSDENGLIIVWMLHKGMWYEEMINNRGKSVVRDMKWTSDGQKICIVYEDGAVIVGSVDGNRLWGKELDIYLQHVEXXXXXXXXXXXXXXXXXH---IYDAAGAKVKLMQLPAAT-LAAASKPPSDGSARESKHAGDDXXXXDEGYARHNGTSRGGNGASSPAL-IADIDWYDGAEGYVHQAAPTLAIAFVNGTVQIGRHTD 281
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A7S0WI31_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WI31_9CHLO) HSP 1 Score: 281 bits (719), Expect = 2.000e-92 Identity = 140/208 (67.31%), Postives = 157/208 (75.48%), Query Frame = 1 Query: 7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMAL 630 MFIYL+KKIAIPNG +L ++WN QGWIACGG +GL KVLKLE AT K K GG AASNLSMNQTLEGH+GSV+ V WN Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS V+DMKWTS+GQKICI+Y+DGAVIVGSVDGNRLWGKEL L VEWSPDGR +LF T+ GEV +YD G I + L Sbjct: 1 MFIYLSKKIAIPNGVRLKCVSWNSEQGWIACGGDNGLLKVLKLESATPTKDAKAK---------GGPAASNLSMNQTLEGHNGSVMVVNWNENYRKLTTSDQYGLIIVWMLHKGMWFEEMINNRNKSVVRDMKWTSDGQKICIVYEDGAVIVGSVDGNRLWGKELALSLALVEWSPDGR---MVLFCTVQGEVHLYDCNGNAITKLPL 196
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A7S2W6K2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6K2_9STRA) HSP 1 Score: 305 bits (782), Expect = 7.930e-92 Identity = 165/300 (55.00%), Postives = 195/300 (65.00%), Query Frame = 1 Query: 7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDG-GRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAESNARIGGXXXXXXXXXXXXXXXXEDIGDIRGDKKEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQARRGRD 903 MFIYL+KKIAIPN KL L+WNP QGWIACGG +GL KVLKLE +TAG G R+ G AA SNLSMNQTL+GH GSV+CVTWNA + KLTT DE GLIIVWMLH+G+W+EEMINNRN+S V+DMKWT+NG KICI+Y+DGAVIVGSVDGNRLWGKELE L VEWSPD R ILFV+ V YDA+G +++ +ALP L + RG + E + ++ ++VAGI WYDG EG PTL +A G VQ RG D Sbjct: 25 MFIYLSKKIAIPNQVKLRCLSWNPDQGWIACGGDTGLLKVLKLE---------LTAGKGESRSQQGVAAPSNLSMNQTLDGHHGSVMCVTWNALHRKLTTSDETGLIIVWMLHQGMWYEEMINNRNRSVVRDMKWTANGSKICIVYEDGAVIVGSVDGNRLWGKELEMRLTFVEWSPDART---ILFVS-GDTVYAYDAEGNRVKQVALPELDQ--------------------------------DRGKEDEDEEAASSRVEVAGIHWYDGVEGQADPHAPTLAIAFRNGRVQISRGTD 279
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: D7FWE2_ECTSI (WD40 repeat protein flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWE2_ECTSI) HSP 1 Score: 306 bits (783), Expect = 8.430e-92 Identity = 179/317 (56.47%), Postives = 202/317 (63.72%), Query Frame = 1 Query: 7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLE-----GATGRKHTKMTA--GDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAES---NARIGGXXXXXXXXXXXXXXXXEDI-------GDIR-GDKKEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQARRGRD 903 MFIYL+KKIAIPNGTKL SLAWNP QGWIACGGS+GLTKVLKL+ GA G ++ A G G SNLSMNQTLEGH+GSVVCVTWNATYSKLTTCDE GLIIVWMLHKGLWFEEMINNR+KSAV+DMKWTSNGQKICIIY DGAVIVGSVDGNRLWGKEL+ GLQN R M LP + + +S N+ G XXX G+ + G +K G+G+ +V +DWYDGAEG LH +VPTLC+AL+ G VQ RG D Sbjct: 1 MFIYLSKKIAIPNGTKLDSLAWNPAQGWIACGGSNGLTKVLKLDSVGGGGAGGAPGKEVNAENGRGXXXXXXXXXXSNLSMNQTLEGHEGSVVCVTWNATYSKLTTCDEQGLIIVWMLHKGLWFEEMINNRHKSAVRDMKWTSNGQKICIIYADGAVIVGSVDGNRLWGKELDMGLQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RAMTLPEGAEITPDSTGANSPTSGSKKKPAFLRDEKDXXXXXXXXNEAKGGEGKNGGRKRGEGKKG---RVIFVDWYDGAEGLLHPQVPTLCIALDGGFVQLSRGVD 311
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A067D149_SAPPC (ANAPC4_WD40 domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D149_SAPPC) HSP 1 Score: 299 bits (765), Expect = 1.350e-89 Identity = 160/298 (53.69%), Postives = 189/298 (63.42%), Query Frame = 1 Query: 7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAESNARIGGXXXXXXXXXXXXXXXXEDIGDIRGDKKEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQARRGR 900 MFI+L+KKIAIPNG +L +WNP GWIACGG SGL KVLKLE AT K K T G AA SNL+MNQ+L+GH GSVVC TWNA Y KLTT DE GLIIVWM+H+G+WFEEMINNRNKS V+DMKW+S+GQKICI Y+DGAVIVGSVDGNRLWGKE++ L VEWSPDG+ ++FVT GEV I+D G +I T+ L A+ DKK K+ G+ WYDG EGH+ ++ PTL +A G VQ RGR Sbjct: 1 MFIFLSKKIAIPNGAQLCCASWNPEHGWIACGGQSGLLKVLKLESAT-SKEGKGTRGI--------AAQSNLTMNQSLDGHAGSVVCATWNANYKKLTTSDENGLIIVWMMHRGMWFEEMINNRNKSVVKDMKWSSDGQKICIAYEDGAVIVGSVDGNRLWGKEMKVDLCFVEWSPDGKH---LVFVTKEGEVSIHDGSGSKIGTLPLYAVDAK----------------------------------DKK---------YKIIGLHWYDGCEGHVSEDAPTLAIAFADGKVQITRGR 243
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A2J7ZHB6_9CHLO (WD repeat domain-containing protein (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZHB6_9CHLO) HSP 1 Score: 274 bits (700), Expect = 2.010e-89 Identity = 135/208 (64.90%), Postives = 154/208 (74.04%), Query Frame = 1 Query: 7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMAL 630 MFIYL+KKIAIPN KL ++WN QGWIACGG SGL KVL+L+G T ++ G GAA NLS+NQTLEGH+G+VVCV WN + KLTT DE GLIIVWMLHKG+WFEEMINNRNKS V+DMKWTSNG+KICIIY+DGAVIVGSVDGNRLWGKEL L VEWSPDGR +LF T GE +YD G + + L Sbjct: 1 MFIYLSKKIAIPNNVKLRCISWNTDQGWIACGGESGLLKVLRLDGTTSKEVKGKKEG--------GAAGGNLSLNQTLEGHNGAVVCVCWNNAFQKLTTSDEFGLIIVWMLHKGMWFEEMINNRNKSVVKDMKWTSNGEKICIIYEDGAVIVGSVDGNRLWGKELGMELALVEWSPDGRL---LLFATPQGECQVYDGNGNGVAKVPL 197
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A388K193_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K193_CHABU) HSP 1 Score: 299 bits (765), Expect = 4.990e-89 Identity = 177/297 (59.60%), Postives = 200/297 (67.34%), Query Frame = 1 Query: 7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGA-AASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAESNARIGGXXXXXXXXXXXXXXXXEDIGDIRGDKKEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQARR 894 MF+YL+KKIAIPNG KL S+AWN QGWIACGG SGL KVLKLE R K + GG GGA AA+NLSMNQTLEGH+G+VV V WN Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS V+DMKWTS+GQKICI+Y+DGAVIVGSVDGNRLWGKEL L VEWSPDGR ILF T+ GE I+D G Q+ LP LS E R XXXXXXXXXXXXXX S+ + G+DWYDG EG+ PTL + + G +Q R Sbjct: 1 MFVYLSKKIAIPNGVKLRSVAWNSEQGWIACGGDSGLLKVLKLESGPARD-AKASGRKGGATAAGGAGAANNLSMNQTLEGHNGAVVVVQWNENYRKLTTSDQYGLIIVWMLHKGMWFEEMINNRNKSVVKDMKWTSDGQKICIVYEDGAVIVGSVDGNRLWGKELPLQLALVEWSPDGRL---ILFCTLEGECYIFDQNGNQMAR--LPLLSDSVVEQG-RTHNNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSKTAIIGVDWYDGLEGYSDPNSPTLAIGMANGKLQLMR 290
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A7S0LCH0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LCH0_9EUKA) HSP 1 Score: 281 bits (720), Expect = 1.190e-88 Identity = 145/219 (66.21%), Postives = 166/219 (75.80%), Query Frame = 1 Query: 7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAESN 663 MFIYL+KKIAIPNG KL SL+WN V GWI CGG +GL KVLKL+ +GR K G AA SNLSMNQTLEGH+GSVVCV WN +Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS V+ MKWT++GQ+ICIIY+DGAVIVGSVDGNRLWG+EL+T L +VEWSPDGR ILF TM EV +YDA G I M L L AA+++ Sbjct: 29 MFIYLSKKIAIPNGVKLKSLSWNGVNGWIVCGGENGLLKVLKLD--SGRSQDKAK---------GLAAPSNLSMNQTLEGHNGSVVCVCWNESYRKLTTSDQYGLIIVWMLHKGIWFEEMINNRNKSTVRGMKWTADGQRICIIYEDGAVIVGSVDGNRLWGRELKTQLAHVEWSPDGRN---ILFCTMQCEVHVYDAIGNFISKMPLYCLDDAAAQTS 233
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A7S0HEY4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HEY4_9EUKA) HSP 1 Score: 270 bits (691), Expect = 1.200e-87 Identity = 140/216 (64.81%), Postives = 158/216 (73.15%), Query Frame = 1 Query: 7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAA 654 MF+YL+KKIAIPNG KL SL WN V GWI CGG +GL KVLKL+ +GR K G AA SNLSMNQTLEGH+GSV+CV WN Y KLTT D+ GLIIVWMLHKG+WFEEMINNRNKS V+ MKWT +GQ+ICIIY+DGAVIVGSVDGNRLWGKEL+ L +V+WSPDGR ++F T EV IYDA G I M L L AA Sbjct: 12 MFVYLSKKIAIPNGVKLKSLNWNTVNGWIVCGGENGLLKVLKLD--SGRTTDKSK---------GMAAPSNLSMNQTLEGHNGSVMCVCWNENYRKLTTSDQYGLIIVWMLHKGMWFEEMINNRNKSTVRGMKWTPDGQRICIIYEDGAVIVGSVDGNRLWGKELKMQLAHVQWSPDGR---SLIFCTPQCEVHIYDAVGNYISKMNLYCLDDAAA 213
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Match: A0A7S0LYC8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LYC8_9CRYP) HSP 1 Score: 266 bits (680), Expect = 3.420e-85 Identity = 147/293 (50.17%), Postives = 168/293 (57.34%), Query Frame = 1 Query: 7 MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKHTKMTAGDGGRNGGGGAAASNLSMNQTLEGHDGSVVCVTWNATYSKLTTCDELGLIIVWMLHKGLWFEEMINNRNKSAVQDMKWTSNGQKICIIYQDGAVIVGSVDGNRLWGKELETGLQNVEWSPDGRRQDQILFVTMAGEVLIYDAQGKQIRTMALPALSRLAAESNARIGGXXXXXXXXXXXXXXXXEDIGDIRGDKKEGDGRSAPSMKVAGIDWYDGAEGHLHQEVPTLCVALERGLVQ 885 MFIYL KKIAIPNG L WN QGWIACGG GL KVLKLE A K + A SNL+MNQTLEGH V+C WN + KLTT DE GLIIVWMLHKGLWFEEMINNRNKS V+DMKW ++GQKICI+Y+DGAVIVGSVDGNRLWGK+L+ LQ VEWSPDG+ ILFVT G V +YD G + L + +S A VAG+ WY+G EG + PTL +A + G VQ Sbjct: 2 MFIYLNKKIAIPNGVVLRCCYWNADQGWIACGGEGGLLKVLKLESAGKGKERGI------------AGTSNLTMNQTLEGHSEPVICAAWNEAFKKLTTSDESGLIIVWMLHKGLWFEEMINNRNKSVVRDMKWNADGQKICIVYEDGAVIVGSVDGNRLWGKDLKMQLQYVEWSPDGKL---ILFVTPQGVVHVYDGLGNFVSQAPL-----FSDDSTAT-----------------------------------------VAGLCWYNGLEGLVDPNAPTLAIAFDNGRVQ 233 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6775.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6775.1.2 >prot_C-tenellus_contig6775.1.2 ID=prot_C-tenellus_contig6775.1.2|Name=mRNA_C-tenellus_contig6775.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=299bp MFIYLTKKIAIPNGTKLHSLAWNPVQGWIACGGSSGLTKVLKLEGATGRKback to top mRNA from alignment at C-tenellus_contig6775:700..2566- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6775.1.2 ID=mRNA_C-tenellus_contig6775.1.2|Name=mRNA_C-tenellus_contig6775.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1867bp|location=Sequence derived from alignment at C-tenellus_contig6775:700..2566- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6775:700..2566- >mRNA_C-tenellus_contig6775.1.2 ID=mRNA_C-tenellus_contig6775.1.2|Name=mRNA_C-tenellus_contig6775.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=897bp|location=Sequence derived from alignment at C-tenellus_contig6775:700..2566- (Choristocarpus tenellus KU2346)back to top |