mRNA_C-tenellus_contig6742.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6742.2.1 vs. uniprot
Match: D7FWC7_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC7_ECTSI) HSP 1 Score: 290 bits (741), Expect = 7.990e-88 Identity = 135/183 (73.77%), Postives = 158/183 (86.34%), Query Frame = 1 Query: 37 QVSQVPDRDLRKRLKVVFSGEEGVDEGGVAKEFFQLLTTKLFDRLFGMFVPAGVGGRLLWFNKDCDWADEEYGLVGLLVGLAVYSGIILDVPFPLAVFRKVLGQDLSLQDMSDLDPELMRGLQQLRDYDEDDVEDVFSLTFQITWDDLGFQRSHDLKEGGGNQPVTSANKEEYIELYAKYVVV 585 +VS++PD DLRKRLKVVF GE+GVDEGGV KEFFQLLT +LFD+ FGMFVPAG GGR+LWFNKDC WADEEYGLVGLLVGLAVYSG+ILDVP PL VF+KVLG+ LSL+D+ D+DP L++G QLRDYD D EDVF L F++TWDDLG +RSHDL EGG N PVTS NKE Y+ELYA++++V Sbjct: 875 KVSRLPDADLRKRLKVVFRGEDGVDEGGVTKEFFQLLTVQLFDQSFGMFVPAGEGGRVLWFNKDCVWADEEYGLVGLLVGLAVYSGVILDVPLPLVVFKKVLGEQLSLEDLGDIDPGLLKGFHQLRDYDGGDDEDVFGLDFRVTWDDLGMERSHDLVEGGANIPVTSENKESYVELYAQFLLV 1057
BLAST of mRNA_C-tenellus_contig6742.2.1 vs. uniprot
Match: A0A6H5K2Y9_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2Y9_9PHAE) HSP 1 Score: 234 bits (597), Expect = 9.360e-68 Identity = 115/182 (63.19%), Postives = 134/182 (73.63%), Query Frame = 1 Query: 40 VSQVPDRDLRKRLKVVFSGEEGVDEGGVAKEFFQLLTTKLFDRLFGMFVPAGVGGRLLWFNKDCDWADEEYGLVGLLVGLAVYSGIILDVPFPLAVFRKVLGQDLSLQDMSDLDPELMRGLQQLRDYDEDDVEDVFSLTFQITWDDLGFQRSHDLKEGGGNQPVTSANKEEYIELYAKYVVV 585 VS++PD DLRK+LKVVF GE+GVDEGGVAKEFFQLLT +LFD+ FGMFVPAG GGR+LWFNKDC WADEEYGLVGLLVGLAVYSG+ILDVP PL VF+K+LG+ LSL+ +TWDDLG +RSHDL EGG N PVTS NKE Y+ELYA++++V Sbjct: 1387 VSRLPDADLRKKLKVVFRGEDGVDEGGVAKEFFQLLTVQLFDQSFGMFVPAGEGGRVLWFNKDCVWADEEYGLVGLLVGLAVYSGVILDVPLPLVVFKKLLGEQLSLE---------------------------------VTWDDLGMERSHDLVEGGANIPVTSENKESYVELYAQFLLV 1535
BLAST of mRNA_C-tenellus_contig6742.2.1 vs. uniprot
Match: A0A7S4QMC4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QMC4_9STRA) HSP 1 Score: 202 bits (513), Expect = 9.020e-60 Identity = 101/187 (54.01%), Postives = 136/187 (72.73%), Query Frame = 1 Query: 37 QVSQVPDRDLRKRLKVVFSGEEGVDEGGVAKEFFQLLTTKLFDRLFGMFVPAGVGG--RLLWFNKDCDWADEEYGLVGLLVGLAVYSGIILDVPFPLAVFRKVLGQDLSLQDMSDLDPELMRGLQQLRDYDEDDVEDVFSLTFQITWDDLGFQRSHDLKEGGGNQPVTSANKEEYIELYAKYVVVYS 591 ++ DLRK+LKVVF GE+GVD GGV KEFFQLL +LFD GM+ VGG ++ WFN DC W ++ Y LVG+LVGLA+Y+G++LDV FP AV+RK++ L+L+DM +D E+ GLQQL DYD DDVED+F LTF++ W ++G QR +LK GG + PVTS N+EEY+ LY ++++V S Sbjct: 111 KIESASPEDLRKQLKVVFKGEDGVDAGGVTKEFFQLLAVQLFDINTGMW-STRVGGDEQVTWFNSDCSWNEDGYYLVGILVGLALYNGVLLDVHFPSAVYRKLMALPLALEDM--VDKEVRSGLQQLLDYDGDDVEDIFCLTFEVMWMEMGNQRKLELKPGGADIPVTSDNREEYVMLYVRWLLVES 294
BLAST of mRNA_C-tenellus_contig6742.2.1 vs. uniprot
Match: A0A7S3P553_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P553_9STRA) HSP 1 Score: 201 bits (512), Expect = 2.450e-56 Identity = 101/175 (57.71%), Postives = 128/175 (73.14%), Query Frame = 1 Query: 61 DLRKRLKVVFSGEEGVDEGGVAKEFFQLLTTKLFDRLFGMFVPAGVGGRLLWFNKDCDWADEEYGLVGLLVGLAVYSGIILDVPFPLAVFRKVLGQDLSLQDMSDLDPELMRGLQQLRDYDEDDVEDVFSLTFQITWDDLGFQRSHDLKEGGGNQPVTSANKEEYIELYAKYVVV 585 DLRK LKVVF GE+GVD GGV KEFFQLL+ +LFD GM+ G R+ WFN DC W + Y LVG+LVGLA+Y+ ++LDV FP AV+RK+LG+ L L+DM +D EL GLQ L DYD DDVEDVF L F++TW LG ++ +LK G N PVTS+NKEEY+ LY ++++V Sbjct: 1138 DLRKSLKVVFKGEDGVDAGGVTKEFFQLLSQELFDVSTGMW-STRYGDRVTWFNGDCTWNFDGYYLVGILVGLALYNSVLLDVHFPAAVYRKLLGRSLGLEDM--VDEELKNGLQALLDYDGDDVEDVFCLNFEVTWTSLGSEKRMELKPNGANIPVTSSNKEEYVLLYVRWLLV 1309
BLAST of mRNA_C-tenellus_contig6742.2.1 vs. uniprot
Match: B7G8Z6_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8Z6_PHATC) HSP 1 Score: 183 bits (464), Expect = 7.690e-54 Identity = 91/165 (55.15%), Postives = 119/165 (72.12%), Query Frame = 1 Query: 94 GEEGVDEGGVAKEFFQLLTTKLFDRLFGMFVPA-GVGGRLLWFNKDCDWADEEYGLVGLLVGLAVYSGIILDVPFPLAVFRKVLGQDLSLQDMSDLDPELMRGLQQLRDYDEDDVEDVFSLTFQITWDDLGFQRSHDLKEGGGNQPVTSANKEEYIELYAKYVVV 585 GEEG+D GGV +E+FQLL+ +LFD GM+ G R+ WFN DC W D+ Y LVG+LVGLA+Y+ ++LDV FP AV+RK+LG L L+DM +D E+ GLQ L DY +DDVEDVF LTF + W DLG ++ +LK GG + PVTS NKEEY+ LY K+++V Sbjct: 1 GEEGIDAGGVTREYFQLLSAQLFDVNSGMWSNRFGDDSRITWFNSDCIWDDDGYFLVGVLVGLALYNSVLLDVHFPQAVYRKLLGLPLGLEDM--VDEEVKSGLQHLLDYSDDDVEDVFCLTFDVAWTDLGEEKRKELKPGGIDTPVTSDNKEEYVILYVKWLLV 163
BLAST of mRNA_C-tenellus_contig6742.2.1 vs. uniprot
Match: A0A7S2XN65_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN65_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.170e-53 Identity = 93/183 (50.82%), Postives = 132/183 (72.13%), Query Frame = 1 Query: 37 QVSQVPDRDLRKRLKVVFSGEEGVDEGGVAKEFFQLLTTKLFDRLFGMFVPAGVGGRLLWFNKDCDWADEEYGLVGLLVGLAVYSGIILDVPFPLAVFRKVLGQDLSLQDMSDLDPELMRGLQQLRDYDEDDVEDVFSLTFQITWDDLGFQRSHDLKEGGGNQPVTSANKEEYIELYAKYVVV 585 ++ +LRK+L+V+F EEGVD GGV +EFFQLL+ LFD ++ G ++ WFN DC W ++ Y LVG+LVGLA+Y+ ++LDV FP+AV+RK+LG L L+DM +D EL +GL L DY+ DDVEDVF LTF++TW DLG +++ +LK GG + PVTS N+EEY+ LY ++V++ Sbjct: 985 KIKATKGTELRKKLRVIFKDEEGVDAGGVTREFFQLLSQDLFDVSSSLWTTQ-YGDQITWFNSDCTWDNDGYELVGILVGLALYNSVLLDVHFPMAVYRKLLGLPLGLEDM--VDEELKKGLHHLLDYEGDDVEDVFCLTFEVTWMDLGKEQNVELKPGGSDIPVTSDNREEYVLLYVEWVLI 1164
BLAST of mRNA_C-tenellus_contig6742.2.1 vs. uniprot
Match: A0A1Z5JAZ9_FISSO (Ubiquitin-protein ligase E3 A n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAZ9_FISSO) HSP 1 Score: 191 bits (486), Expect = 7.540e-53 Identity = 90/183 (49.18%), Postives = 131/183 (71.58%), Query Frame = 1 Query: 37 QVSQVPDRDLRKRLKVVFSGEEGVDEGGVAKEFFQLLTTKLFDRLFGMFVPAGVGGRLLWFNKDCDWADEEYGLVGLLVGLAVYSGIILDVPFPLAVFRKVLGQDLSLQDMSDLDPELMRGLQQLRDYDEDDVEDVFSLTFQITWDDLGFQRSHDLKEGGGNQPVTSANKEEYIELYAKYVVV 585 ++ + ++LR +L+V F GE+GVD GGV +EFF LL+ +LFD M+ G + WFN DC W ++ Y LVG+L GL +Y+G++LDV FP AV+RK+L L L+D+ +DPE+ +G+QQL DYD DDVED+F L+F+++W DLG ++ +LK GG + PVTS NKEEY+ LY K+++V Sbjct: 964 KIKEADPKELRMKLRVKFKGEDGVDAGGVTREFFHLLSDELFDVNSSMWTRR-FGDNITWFNSDCTWDEQGYELVGILFGLGLYNGVLLDVHFPQAVYRKLLDLPLGLEDL--VDPEIRKGMQQLLDYDGDDVEDIFCLSFEVSWMDLGEEKKVELKPGGADIPVTSFNKEEYVLLYVKWLLV 1143
BLAST of mRNA_C-tenellus_contig6742.2.1 vs. uniprot
Match: A0A7S2YF11_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YF11_9STRA) HSP 1 Score: 191 bits (485), Expect = 7.700e-53 Identity = 97/183 (53.01%), Postives = 126/183 (68.85%), Query Frame = 1 Query: 37 QVSQVPDRDLRKRLKVVFSGEEGVDEGGVAKEFFQLLTTKLFDRLFGMFVPAGVGGRLLWFNKDCDWADEEYGLVGLLVGLAVYSGIILDVPFPLAVFRKVLGQDLSLQDMSDLDPELMRGLQQLRDYDEDDVEDVFSLTFQITWDDLGFQRSHDLKEGGGNQPVTSANKEEYIELYAKYVVV 585 ++S +LRK LK+VF GE+GVD GGV +EF LL+ +LFD GM+ WFN DC W DE Y LVG+L GLAVY+ +ILDV FP AV+RK+LG L L+DM +D E GLQQL +Y+ DDVED+F L+F+ TW DLG +R +LK GG + PVTS N+EEY+ LY K+++V Sbjct: 646 KISGASHVELRKSLKIVFKGEDGVDAGGVLREFMYLLSHQLFDASTGMWSSHFDESGTTWFNGDCTWNDEGYYLVGVLTGLAVYNDVILDVHFPRAVYRKLLGYTLGLEDM--VDEETRNGLQQLLNYEGDDVEDIFCLSFEHTWMDLGIERKVELKPGGADIPVTSQNREEYVMLYVKWLLV 826
BLAST of mRNA_C-tenellus_contig6742.2.1 vs. uniprot
Match: A0A7S2R9E4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9E4_9STRA) HSP 1 Score: 188 bits (477), Expect = 8.230e-52 Identity = 94/184 (51.09%), Postives = 130/184 (70.65%), Query Frame = 1 Query: 37 QVSQVPDRDLRKRLKVVFSGEEGVDEGGVAKEFFQLLTTKLFDRLFGMFVPAGVGGRLLWFNKDCDWADEEYGLVGLLVGLAVYSGIILDVPFPLAVFRKVL-GQDLSLQDMSDLDPELMRGLQQLRDYDEDD-VEDVFSLTFQITWDDLGFQRSHDLKEGGGNQPVTSANKEEYIELYAKYVV 582 Q+ VPD +LRK LKV F GE+G+DEGGV KEFFQLL +LF +GMF VGG L WFN+ C W+D EY LVG+L+GLA+Y+G+ILDV FPL V++K+L Q +L+D++ LDPEL RGL+QL +++ VED F +F++TW G +LK GG +T N++EY+ELY ++++ Sbjct: 597 QLVSVPDTELRKELKVAFEGEDGIDEGGVRKEFFQLLIERLFSEQYGMFTR--VGGSL-WFNQGCTWSDGEYSLVGMLIGLALYNGVILDVHFPLVVYKKLLPDQRWTLRDVAFLDPELARGLRQLLEFEPAGLVEDTFCRSFEVTWTSFGADHVTELKPGGSEILITGENRKEYVELYVRWLL 777
BLAST of mRNA_C-tenellus_contig6742.2.1 vs. uniprot
Match: A0A7S2KF19_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KF19_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.240e-51 Identity = 91/182 (50.00%), Postives = 130/182 (71.43%), Query Frame = 1 Query: 40 VSQVPDRDLRKRLKVVFSGEEGVDEGGVAKEFFQLLTTKLFDRLFGMFVPAGVGGRLLWFNKDCDWADEEYGLVGLLVGLAVYSGIILDVPFPLAVFRKVLGQDLSLQDMSDLDPELMRGLQQLRDYDEDDVEDVFSLTFQITWDDLGFQRSHDLKEGGGNQPVTSANKEEYIELYAKYVVV 585 + Q +D+RKRL+V F GEEG+D GGV KEFFQLL+ +LFD G++ G + WFN D W ++ Y ++G+L GLA+Y+ ++LDV FP+AV+RK+LG L L+D+ +D EL RGL+QL DY+ DDVED+F L+F++TW +LG +R DLK G N PVT+ N+EEY+ Y +++V Sbjct: 1104 IKQADPKDIRKRLRVSFKGEEGLDAGGVTKEFFQLLSEELFDINSGLWSNK-YGDEMNWFNSDNTWDEKGYEMIGVLFGLALYNNVLLDVRFPMAVYRKLLGLPLGLEDI--VDTELRRGLKQLLDYEGDDVEDIFCLSFEVTWMELGEERRLDLKPDGANIPVTNNNREEYVLRYVSWILV 1282 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6742.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6742.2.1 >prot_C-tenellus_contig6742.2.1 ID=prot_C-tenellus_contig6742.2.1|Name=mRNA_C-tenellus_contig6742.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=198bp MFILFIFLSFLFQVSQVPDRDLRKRLKVVFSGEEGVDEGGVAKEFFQLLTback to top mRNA from alignment at C-tenellus_contig6742:1627..4922- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6742.2.1 ID=mRNA_C-tenellus_contig6742.2.1|Name=mRNA_C-tenellus_contig6742.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3296bp|location=Sequence derived from alignment at C-tenellus_contig6742:1627..4922- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6742:1627..4922- >mRNA_C-tenellus_contig6742.2.1 ID=mRNA_C-tenellus_contig6742.2.1|Name=mRNA_C-tenellus_contig6742.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=594bp|location=Sequence derived from alignment at C-tenellus_contig6742:1627..4922- (Choristocarpus tenellus KU2346)back to top |