mRNA_C-tenellus_contig6715.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6715.3.1 vs. uniprot
Match: X2KY60_SCYLO (Succinate semialdehyde dehydrogenase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=X2KY60_SCYLO) HSP 1 Score: 190 bits (483), Expect = 1.210e-55 Identity = 93/145 (64.14%), Postives = 113/145 (77.93%), Query Frame = 1 Query: 1 VAGLVGDALSHGAVALVGGELSHEMGPNFFSPTLLTGCPPQARICTEEIFGPVANVVNFTEEDEALSSANSSLSGLAGYVFTQDLSRGLRFAEGLEVGMVGINDCNISKNIIPFGGVKESGMGREGSVLGLDEYLETKHICIGGL 435 VA LV DA+ GA + GG + HEMG NFF+PTLL GC RI EEIFGPV V F + +EAL+ +NSS SGLAGYV+TQD SRG+RFA LEVGMVGIN+ +IS +++PFGGVKESGMGREGS LG+DE++E KHIC+GG+ Sbjct: 354 VASLVNDAVDKGAEVVCGGAVGHEMGANFFAPTLLVGCTLDMRISHEEIFGPVVACVKFQDAEEALAMSNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGINESSISSSVVPFGGVKESGMGREGSELGMDEFMEVKHICLGGI 498
BLAST of mRNA_C-tenellus_contig6715.3.1 vs. uniprot
Match: D7FW35_ECTSI (Aldehyde Dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW35_ECTSI) HSP 1 Score: 185 bits (470), Expect = 1.030e-53 Identity = 94/146 (64.38%), Postives = 115/146 (78.77%), Query Frame = 1 Query: 1 VAGLVGDALSHGAVALVGGELS-HEMGPNFFSPTLLTGCPPQARICTEEIFGPVANVVNFTEEDEALSSANSSLSGLAGYVFTQDLSRGLRFAEGLEVGMVGINDCNISKNIIPFGGVKESGMGREGSVLGLDEYLETKHICIGGL 435 VAGLV DA+ GA + GG+L HEMG NFF+PTLL GC RI EEIFGPV V+ F + DEAL+ +NSS SGLAGYV+TQD SRG+RFA LEVGMVG+N+ +IS ++PFGGVKESGMGREGSV+G+DE++E K IC+GG+ Sbjct: 354 VAGLVKDAIDKGADVVCGGQLEQHEMGNNFFAPTLLGGCTLDMRISHEEIFGPVVAVMKFKDVDEALTISNSSRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLGGI 499
BLAST of mRNA_C-tenellus_contig6715.3.1 vs. uniprot
Match: UPI000719E6D1 (succinate-semialdehyde dehydrogenase, mitochondrial-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719E6D1) HSP 1 Score: 160 bits (404), Expect = 5.960e-47 Identity = 80/142 (56.34%), Postives = 105/142 (73.94%), Query Frame = 1 Query: 10 LVGDALSHGAVALVGGELSHEMGPNFFSPTLLTGCPPQARICTEEIFGPVANVVNFTEEDEALSSANSSLSGLAGYVFTQDLSRGLRFAEGLEVGMVGINDCNISKNIIPFGGVKESGMGREGSVLGLDEYLETKHICIGGL 435 L+ DA++ GA +VGG+ HE G NF+ PT+LTG P + EEIFGPVA +V FT E+EAL ANS+ GLAGY +++D+S+ R A L+VGMVG+N+ IS PFGGVKESG+GREGS G+DEY+ETK++C+GGL Sbjct: 66 LLADAVARGASVVVGGK-RHERGGNFYEPTVLTGITPDMMLAREEIFGPVAPIVKFTSEEEALEIANSTRVGLAGYFYSRDISQIFRVARRLDVGMVGVNEGIISAVEAPFGGVKESGLGREGSSRGIDEYIETKYVCVGGL 206
BLAST of mRNA_C-tenellus_contig6715.3.1 vs. uniprot
Match: UPI000F550C92 (succinate-semialdehyde dehydrogenase, mitochondrial-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F550C92) HSP 1 Score: 152 bits (383), Expect = 5.890e-43 Identity = 77/141 (54.61%), Postives = 103/141 (73.05%), Query Frame = 1 Query: 13 VGDALSHGAVALVGGELSHEMGPNFFSPTLLTGCPPQARICTEEIFGPVANVVNFTEEDEALSSANSSLSGLAGYVFTQDLSRGLRFAEGLEVGMVGINDCNISKNIIPFGGVKESGMGREGSVLGLDEYLETKHICIGGL 435 V DALS GA L GG+ HE+G NFF PT+L+ IC++E FGPVA ++ F E+EA++ AN + SGLAGY ++QD+S+ R AE +EVGMVG+N+ IS I PFGG K+SG+GREGS G++EYLE K+IC+GG+ Sbjct: 136 VKDALSKGAKCLRGGQ-RHELGGNFFQPTVLSDVTRDMIICSQETFGPVAPLIRFKTEEEAVAIANDTSSGLAGYFYSQDVSQIWRVAEAMEVGMVGVNEGIISSEIAPFGGWKQSGLGREGSKYGIEEYLEIKYICLGGI 275
BLAST of mRNA_C-tenellus_contig6715.3.1 vs. uniprot
Match: UPI001E5C01DB (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Marinibactrum sp. C21 TaxID=2904075 RepID=UPI001E5C01DB) HSP 1 Score: 156 bits (394), Expect = 1.140e-42 Identity = 76/138 (55.07%), Postives = 102/138 (73.91%), Query Frame = 1 Query: 22 ALSHGAVALVGGELSHEMGPNFFSPTLLTGCPPQARICTEEIFGPVANVVNFTEEDEALSSANSSLSGLAGYVFTQDLSRGLRFAEGLEVGMVGINDCNISKNIIPFGGVKESGMGREGSVLGLDEYLETKHICIGGL 435 A+ GA + GG++S E+G +F+ PT++T P R+ EEIFGPVA V F+ E EA+S AN++ GLA Y++TQD+ R R +EG++ GMVG+N+ IS IIPFGGVKESG GREGS GLD+YLETK+IC+GG+ Sbjct: 349 AIEDGATVVTGGKVS-ELGAHFYEPTVITNATPDMRLFKEEIFGPVAPVFKFSTEQEAISLANNTEFGLASYIYTQDIGRIWRVSEGVDYGMVGVNETAISSEIIPFGGVKESGQGREGSKYGLDDYLETKYICMGGI 485
BLAST of mRNA_C-tenellus_contig6715.3.1 vs. uniprot
Match: A0A399Y239_9BACT (NAD-dependent succinate-semialdehyde dehydrogenase (Fragment) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A399Y239_9BACT) HSP 1 Score: 147 bits (372), Expect = 2.180e-42 Identity = 78/143 (54.55%), Postives = 99/143 (69.23%), Query Frame = 1 Query: 1 VAGLVGDALSHGAVALVGGELSHEMGPNFF-SPTLLTGCPPQARICTEEIFGPVANVVNFTEEDEALSSANSSLSGLAGYVFTQDLSRGLRFAEGLEVGMVGINDCNISKNIIPFGGVKESGMGREGSVLGLDEYLETKHICI 426 V GLV DA+ GA L GGE GP FF PT+LTG P +AR+ +EEIFGPVA + F+ E+EA++ AN + GL YV+T DL R LR AE +E GMVG+N +S PFGG+KESG+GREG +G+DEYLETK++ I Sbjct: 41 VTGLVADAVERGATVLTGGERVD--GPGFFYRPTVLTGVPTEARMASEEIFGPVAPLTPFSTEEEAVALANDTPYGLVSYVYTNDLRRALRMAEAIESGMVGLNQGVVSNPYAPFGGIKESGLGREGGPVGIDEYLETKYVGI 181
BLAST of mRNA_C-tenellus_contig6715.3.1 vs. uniprot
Match: F6CYY0_MARPP (Succinic semialdehyde dehydrogenase n=1 Tax=Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181) TaxID=491952 RepID=F6CYY0_MARPP) HSP 1 Score: 155 bits (392), Expect = 2.340e-42 Identity = 79/142 (55.63%), Postives = 103/142 (72.54%), Query Frame = 1 Query: 10 LVGDALSHGAVALVGGELSHEMGPNFFSPTLLTGCPPQARICTEEIFGPVANVVNFTEEDEALSSANSSLSGLAGYVFTQDLSRGLRFAEGLEVGMVGINDCNISKNIIPFGGVKESGMGREGSVLGLDEYLETKHICIGGL 435 LV +ALS+GA AL+GG +S E G FF PT+LTG + I + EIFGPVA + F E+EA++ AN++ GLA Y ++Q+L R R +E LE GMVGIN+ IS + PFGGVKESG GREGS G+DEY+ETK++C+GGL Sbjct: 346 LVENALSNGAKALIGGSVSQEAGAQFFEPTVLTGVTEEMDIFSNEIFGPVAPLFKFKSEEEAVAMANNTPFGLASYFYSQNLGRIWRVSEALEYGMVGINEGLISSEVAPFGGVKESGSGREGSKYGIDEYVETKYLCMGGL 487
BLAST of mRNA_C-tenellus_contig6715.3.1 vs. uniprot
Match: A0A1I6SU91_9PSEU (Succinate semialdehyde dehydrogenase n=7 Tax=Saccharopolyspora TaxID=1835 RepID=A0A1I6SU91_9PSEU) HSP 1 Score: 155 bits (391), Expect = 3.490e-42 Identity = 79/145 (54.48%), Postives = 103/145 (71.03%), Query Frame = 1 Query: 1 VAGLVGDALSHGAVALVGGELSHEMGPNFFSPTLLTGCPPQARICTEEIFGPVANVVNFTEEDEALSSANSSLSGLAGYVFTQDLSRGLRFAEGLEVGMVGINDCNISKNIIPFGGVKESGMGREGSVLGLDEYLETKHICIGGL 435 V LV DA++ GA + GG +H+ F++PT+LTG P AR+ TEEIFGPVA + FT+E EA+ AN++ GL Y+FTQ+L RGLR +E LE GMVG+N +S PFGGVK SG+GREG LG+DE+LETK+I IGG+ Sbjct: 349 VTDLVSDAIAQGAQVVTGGH-THDGDGYFYTPTVLTGVPEGARMATEEIFGPVAPITTFTDEREAIDKANNTEYGLVSYLFTQNLQRGLRVSEALETGMVGLNQGIVSNPAAPFGGVKASGLGREGGKLGIDEFLETKYISIGGV 492
BLAST of mRNA_C-tenellus_contig6715.3.1 vs. uniprot
Match: A0A7W5GWD6_9BURK (Succinate-semialdehyde dehydrogenase/glutarate-semialdehyde dehydrogenase n=3 Tax=unclassified Variovorax TaxID=663243 RepID=A0A7W5GWD6_9BURK) HSP 1 Score: 154 bits (390), Expect = 4.440e-42 Identity = 78/142 (54.93%), Postives = 100/142 (70.42%), Query Frame = 1 Query: 10 LVGDALSHGAVALVGGELSHEMGPNFFSPTLLTGCPPQARICTEEIFGPVANVVNFTEEDEALSSANSSLSGLAGYVFTQDLSRGLRFAEGLEVGMVGINDCNISKNIIPFGGVKESGMGREGSVLGLDEYLETKHICIGGL 435 LV +A+ GA +GG H +G F+ PT+LT P AR+ EEIFGPVA +V F ED+A++ ANSS GLA Y F++DL+R R A +E GMVG+N IS + PFGGVK+SGMGREGS GLDEY+ETK++C+GGL Sbjct: 344 LVAEAVQSGAKVAIGGR-RHALGGTFYEPTVLTNVAPDARVVNEEIFGPVAPLVRFETEDDAIAIANSSEFGLASYFFSRDLARVWRVAGAIEAGMVGVNTGLISTAVAPFGGVKQSGMGREGSKFGLDEYMETKYVCLGGL 484
BLAST of mRNA_C-tenellus_contig6715.3.1 vs. uniprot
Match: A0A1A8TFU6_9GAMM (Glutarate-semialdehyde dehydrogenase DavD n=10 Tax=Marinomonas TaxID=28253 RepID=A0A1A8TFU6_9GAMM) HSP 1 Score: 154 bits (390), Expect = 4.580e-42 Identity = 76/142 (53.52%), Postives = 102/142 (71.83%), Query Frame = 1 Query: 10 LVGDALSHGAVALVGGELSHEMGPNFFSPTLLTGCPPQARICTEEIFGPVANVVNFTEEDEALSSANSSLSGLAGYVFTQDLSRGLRFAEGLEVGMVGINDCNISKNIIPFGGVKESGMGREGSVLGLDEYLETKHICIGGL 435 LV DA+S GA ALVGG + + G FF PT+LTG P I + EIFGPVA + F+ E+EA++ AN++ GLA Y ++Q++ R R +EGLE GMVG+N+ IS + PFGGVKESG GREGS G+DEY+E K++C+GG+ Sbjct: 346 LVNDAVSKGAQALVGGTKAEQAGEQFFEPTILTGVTPDMTIFSSEIFGPVAPLFRFSTEEEAVAMANNTPFGLASYFYSQNIGRIWRVSEGLEYGMVGVNEGIISSEVAPFGGVKESGSGREGSKYGIDEYVEVKYLCMGGI 487 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6715.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6715.3.1 >prot_C-tenellus_contig6715.3.1 ID=prot_C-tenellus_contig6715.3.1|Name=mRNA_C-tenellus_contig6715.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=146bp VAGLVGDALSHGAVALVGGELSHEMGPNFFSPTLLTGCPPQARICTEEIFback to top mRNA from alignment at C-tenellus_contig6715:6158..7085- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6715.3.1 ID=mRNA_C-tenellus_contig6715.3.1|Name=mRNA_C-tenellus_contig6715.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=928bp|location=Sequence derived from alignment at C-tenellus_contig6715:6158..7085- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6715:6158..7085- >mRNA_C-tenellus_contig6715.3.1 ID=mRNA_C-tenellus_contig6715.3.1|Name=mRNA_C-tenellus_contig6715.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=438bp|location=Sequence derived from alignment at C-tenellus_contig6715:6158..7085- (Choristocarpus tenellus KU2346)back to top |