mRNA_C-tenellus_contig6700.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6700.2.1 vs. uniprot
Match: D7G6A8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A8_ECTSI) HSP 1 Score: 443 bits (1140), Expect = 5.670e-153 Identity = 226/327 (69.11%), Postives = 267/327 (81.65%), Query Frame = 1 Query: 1 TSSLEELFLDPGFYWSWERFADRWENVFGYPVEDLKPVNVDIMEMYDSIVCVNLKTSFMKSEQFIKVTNSEYFAPLLMVNQFGSKDVFEQVPAVDMFAHLSNWLMRPVPTVTAAVRRFKERYFEDNYVIGLEMELSSASDLGT-MPAAQQQLFFQEASDASHRAASNLGPNQQGIVVLVVTDDEAALRSRLADLGQDSLGAAGVVAITGPRGYGTDRLLTELQQAWLLGYADICIVSPASATGILGHARTSLSPIVIVDGQTAHQATSSQPCLADVGLIQHAKCFVPGMLSHVNYDPNVPCLGTTQPSTVAESDRLR-RARHMQIEL 975 TSSLEE+FLDPGF+WSWERF DRW N FGY EDL VD++ Y+S+VC NLK +FM QFIK+TN+EYFAPLL VNQ S+ V E++P+VD FA LSNWLMRPVPTVTAAVRRF+ERY EDNYVI +EM++ + S G+ M AAQQQLFF+EASDAS+RA NL P+QQGIVVLVVTDDE L+SR+ADLGQDSLGAAGVVAITGPRG+GT R+LTELQQAWLLGY D+ IVSPAS G+LGHAR S+SPIVI+D TAHQ+TSSQPCLAD+G +Q A CF MLS ++YDPNVPCLG P+TV + R RAR++++EL Sbjct: 71 TSSLEEIFLDPGFFWSWERFEDRWLNYFGYAEEDLGSTVVDVIANYNSLVCDNLK-NFMGDTQFIKITNTEYFAPLLTVNQHASRTVLEEIPSVDTFASLSNWLMRPVPTVTAAVRRFRERYLEDNYVIVMEMDVLADSTGGSGMSAAQQQLFFKEASDASYRAKGNLTPDQQGIVVLVVTDDEEGLQSRVADLGQDSLGAAGVVAITGPRGFGTTRILTELQQAWLLGYGDVSIVSPASPIGVLGHARMSVSPIVILDSHTAHQSTSSQPCLADIGRVQEASCFSSAMLSRLSYDPNVPCLGDP-PTTVNSCNAARDRARNLRLEL 395
BLAST of mRNA_C-tenellus_contig6700.2.1 vs. uniprot
Match: A0A6H5JJN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN7_9PHAE) HSP 1 Score: 446 bits (1146), Expect = 3.860e-152 Identity = 227/327 (69.42%), Postives = 267/327 (81.65%), Query Frame = 1 Query: 1 TSSLEELFLDPGFYWSWERFADRWENVFGYPVEDLKPVNVDIMEMYDSIVCVNLKTSFMKSEQFIKVTNSEYFAPLLMVNQFGSKDVFEQVPAVDMFAHLSNWLMRPVPTVTAAVRRFKERYFEDNYVIGLEMELSSASDLGT-MPAAQQQLFFQEASDASHRAASNLGPNQQGIVVLVVTDDEAALRSRLADLGQDSLGAAGVVAITGPRGYGTDRLLTELQQAWLLGYADICIVSPASATGILGHARTSLSPIVIVDGQTAHQATSSQPCLADVGLIQHAKCFVPGMLSHVNYDPNVPCLGTTQPSTVAESDRLR-RARHMQIEL 975 TSSLEE+FLDPGF+WSWERF DRW N FGY EDL VD++ Y+S+VC NLK +FM QFIK+TN+EYFAPLL VNQ + V E++P+VD FA LSNWLMRPVPTVTAAVRRF+ERYFEDNYVI +EM++ + + G+ M AAQQQLFF+EASDAS+RA NL P+QQG+VVLVVTDDE L+SR+ADLGQDSLGAAGVVAITGPRG+GT R+LTELQQAWLLGY D+ IVSPAS G+LGHAR S+SPIVIVD TAHQ+TSSQPCLADVG +Q A+CF MLS ++YDPNVPCLG P TV S+ R RAR+ ++EL Sbjct: 190 TSSLEEIFLDPGFFWSWERFEDRWLNYFGYAEEDLGSTVVDVIANYNSLVCDNLK-NFMGDTQFIKITNTEYFAPLLTVNQHAGRTVLEEIPSVDTFASLSNWLMRPVPTVTAAVRRFRERYFEDNYVIVMEMDVLADTTGGSGMSAAQQQLFFKEASDASYRAKGNLTPDQQGVVVLVVTDDEEGLQSRVADLGQDSLGAAGVVAITGPRGFGTTRILTELQQAWLLGYGDVSIVSPASPIGVLGHARMSVSPIVIVDSHTAHQSTSSQPCLADVGRVQEARCFSSAMLSRLSYDPNVPCLGDP-PRTVKSSNEARDRARNRRLEL 514
BLAST of mRNA_C-tenellus_contig6700.2.1 vs. uniprot
Match: A0A835YLY2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY2_9STRA) HSP 1 Score: 330 bits (845), Expect = 3.640e-107 Identity = 167/305 (54.75%), Postives = 220/305 (72.13%), Query Frame = 1 Query: 4 SSLEELFLDPGFYWSWERFADRWENVFGYPVEDLKPVNVDIMEMYDSIVCVNLKTSFMKSEQFIKVTNSEYFAPLLMVNQFGSKDVFEQVPAVDMFAHLSNWLMRPVPTVTAAVRRFKERYFEDNYVIGLEMELSSA-SDLGTMPAAQQQLFFQEASDASHRAASNLGPNQQGIVVLVVTDDEAALRSRLADLGQDSLGAAGVVAITGPRGYGTDRLLTELQQAWLLGYADICIVSPASATGILGHARTSLSPIVIV-DGQTAHQATSSQPCLADVGLIQHAKCFVPGMLSHVNYDPNVPCLGTT 912 SSLEE+FLDPGF+WSW+RF RW F ++ V V++ +++ C +L+ ++ +QF+KV + YFAP L VN + +F Q+P +FA+LSNWL+RPVPTV AV RF ERYFEDNYVIGLEM L A + GTM AAQQ+ FFQEA+DA++RA L +G+++LVVTDDE ALR+RL QD+LGAAG++AITGPRG GT R+LTELQ+ WLLGYAD+CIVSPAS TG++GHART +PIV+ DG AH + ++QPC AD+ ++ A CF P ML+ ++ DP VPC+ T Sbjct: 81 SSLEEIFLDPGFWWSWDRFMGRWTGRFERAAAEIDIVVVNVSAEVEALACGDLRRWRVR-DQFVKVAGAHYFAPALAVNARHADALFAQLPRDQLFAYLSNWLLRPVPTVMTAVHRFAERYFEDNYVIGLEMSLWQALGEWGTMTAAQQKRFFQEAADATYRATQAL----RGVMILVVTDDEEALRARLKGQPQDALGAAGIIAITGPRGTGTRRILTELQEVWLLGYADVCIVSPASPTGVVGHARTGRAPIVVAADGGAAHASAATQPCFADLAALRAASCFRPDMLAQLSIDPEVPCVDET 380
BLAST of mRNA_C-tenellus_contig6700.2.1 vs. uniprot
Match: A0A7S2RPW9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPW9_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.340e-50 Identity = 118/309 (38.19%), Postives = 173/309 (55.99%), Query Frame = 1 Query: 10 LEELFLDPGFYWSWERFADRWENVFG-YP-VEDLKPVNV----DIMEMYDSIVCVNLKTSFMKSEQFIKVTNSEYFAPLLMVNQFGSKDVFEQVPAVDMFAHLSNWLMRPVPTVTAAVRRFKERYFEDNYVIGLEMEL----SSASDLGTMPAAQQQLFFQEASD-ASHRAASNLGPNQQGIVVLVVTDDEAALRSRLADLGQDS-LGAAGVVAITGPRGYGTDRLLTELQQAWLLGYADICIVSPASATGILGHARTSLSPIVIVDGQTAHQATSSQPCLADVGLIQHAKCFVPGMLSHVNYDPNVPC 900 L ++ PGF W+++ FA + G +P + P+ V ++++ + + C N+ T + +F++V EYF PLL+VN + S V E++PA FA L N+L+RP P + ++ R K RY E N VIGLEM + S G MP QQ+ FF AS S A S L QG+V L VTD+ +++R +L S + +AGV+AI G G R+ ELQ+ +LLG++ + + +P S GI+GHART LSP+V VD T HQ+T+ PC + LI+ CF ML + D VPC Sbjct: 261 LNDVLTAPGFSWNYDAFATAYRGTTGAFPALVPWDPLMVSAGGELVDAIEPLTCSNVAT-LLAPHKFVQVRTQEYFLPLLLVNPYYSY-VDEELPAQWAFADLMNFLIRPTPDIVDSIERVKIRYLEGNAVIGLEMAVMPGGGSWDGAGLMPLEQQRRFFSTASSLVSQDAISTLNTAGQGVVFLFVTDNPGEVQARFRELDSSSEVTSAGVIAILAVSGAGRSRVQLELQELFLLGHSTVLLTTPGSLLGIIGHARTRLSPLV-VDEDTVHQSTAPYPCFVNWDLIERTTCFHSSMLYKLPPDELVPC 566
BLAST of mRNA_C-tenellus_contig6700.2.1 vs. uniprot
Match: A0A7S2F7A7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F7A7_9STRA) HSP 1 Score: 112 bits (280), Expect = 2.560e-24 Identity = 60/131 (45.80%), Postives = 76/131 (58.02%), Query Frame = 1 Query: 511 QQGIVVLVVTDDEAALRSRLADL-GQDSLGAAGVVAITGPRGYGTDRLLTELQQAWLLGYADICIVSPASATGILGHARTSLSPIVIVDGQTAHQATSSQPCLADVGLIQHAKCFVPGMLSHVNYDPNVPC 900 + G V LVVTD+E L ++ +L ++ AG+VAI G G R E+Q+ WLLGYADI + +P S GI AR L P V+VD T +T+ PCLA G IQH+ CFVP MLS D VPC Sbjct: 305 ENGAVFLVVTDNEEQLHTKFQELEAAGNVITAGIVAILSATGVGRTRAALEVQELWLLGYADIILTTPGSRLGITASARAVLQPHVVVDENTVRLSTAPYPCLASFGFIQHSSCFVPSMLSKYPPDSQVPC 435
BLAST of mRNA_C-tenellus_contig6700.2.1 vs. uniprot
Match: A0A7S2UWL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWL4_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.380e-8 Identity = 43/122 (35.25%), Postives = 63/122 (51.64%), Query Frame = 1 Query: 16 ELFLDPGFYWSWERFADRWENVFGYPVEDLKPVNVDIMEMYDSIVCVNLKTSFMKSEQFIKVTNS------EYFAPLLMVNQFGSKDVFEQVPAVDMFAHLSNWLMRPVPTVTAAVRRFKER 363 ELF PGF W W + G + K +D + + S +C +L+T S+ TNS +YFA L+ N + + E++P +FA LSN+L+RP+P VT AV RF+ER Sbjct: 1 ELFEPPGFAWEWAALQEA----LGEEGDLSKIPTLDPVAQFQSTICSDLRTWDSGSKVVRLSTNSADGGPHQYFAALIAANPVFTF-LQEELPYDQLFALLSNFLLRPLPVVTYAVSRFRER 117 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6700.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6700.2.1 >prot_C-tenellus_contig6700.2.1 ID=prot_C-tenellus_contig6700.2.1|Name=mRNA_C-tenellus_contig6700.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=326bp TSSLEELFLDPGFYWSWERFADRWENVFGYPVEDLKPVNVDIMEMYDSIVback to top mRNA from alignment at C-tenellus_contig6700:2853..5029- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6700.2.1 ID=mRNA_C-tenellus_contig6700.2.1|Name=mRNA_C-tenellus_contig6700.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2177bp|location=Sequence derived from alignment at C-tenellus_contig6700:2853..5029- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6700:2853..5029- >mRNA_C-tenellus_contig6700.2.1 ID=mRNA_C-tenellus_contig6700.2.1|Name=mRNA_C-tenellus_contig6700.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=978bp|location=Sequence derived from alignment at C-tenellus_contig6700:2853..5029- (Choristocarpus tenellus KU2346)back to top |