mRNA_C-tenellus_contig670.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig670.5.1 vs. uniprot
Match: D7G642_ECTSI (DUF1995 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G642_ECTSI) HSP 1 Score: 337 bits (863), Expect = 4.850e-109 Identity = 163/230 (70.87%), Postives = 192/230 (83.48%), Query Frame = 1 Query: 100 QLIRCFF---GGPKKGPPGNYDAIASQAIAAVQAGLKGGLQAMEVEFPPLGSLNKINDGSAKSRQLAQANTVAFTKKLVGGMGWGKKVYVVCCQPGVRGD--LAKTGGADVRDLDARNLPDAKKGDIQVIVTPADQTQWRLAKQMSETAPVVIVNGVFLNGFVPFEPVYYFKPISGWGSLVRQYPSPFTAYLADSNKVVPCDAELTQQGDLRRPNLAKVSAALSKAFNER 774 + +RCFF GG KKGPP NYDAIA+QAIAAVQAGLK G +AMEVEFPPL SLNKINDGSAK+R+LA+ NT++F KKLVG +G KK YVVCCQPG + D + G ADVRD++A+NLP AK GD+ V+VTPADQ QW+LAK+M+ET VVIVNGVF+NG+VPFEPVYYFKPISGWGS+VRQYP PFTAYLA+SNKVVPCDA L +QGD+RRP+L + ALS AF E+ Sbjct: 60 ETVRCFFSFGGGAKKGPPANYDAIAAQAIAAVQAGLKSGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKSKKAYVVCCQPGAKADFGIGVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETTTVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQ 289
BLAST of mRNA_C-tenellus_contig670.5.1 vs. uniprot
Match: A0A836CID5_9STRA (DUF1995 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CID5_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.060e-65 Identity = 119/246 (48.37%), Postives = 158/246 (64.23%), Query Frame = 1 Query: 88 SVFLQLIRCFFGGPKKG--------PPGNYDAIASQAIAAVQAGLKGGLQAMEVEFPPLGSLNKINDGSAKSRQLAQANTVAFTKKLVGGMGWGKK--VYVVCCQPGVRGDLA---KTGGADVRDLD--ARNLPDAKKGDIQVIVTPADQTQWRLAKQMSETAPVVIVNGVFLNGFVPFEPVYYFKPISGWGSLVRQYPSPFTAYLADSNKVVPCDAELTQQGDLRRPNLAKVSAALSKAFNERAA 780 S IRCFFG G PP +Y A+ +QA AAV A LK G+Q MEV+FPPL +LNK+ DGSAK+R+L + AF KLV + K V+++CC+ G R LA K G A++ D+ A+N P A GD+ VIVTP D +QWRLA+ M +TAPVV+ NG+F NGF F PVYYFKPISGWG L++ YP+ +T +LA + +V+PC ++ G+L RPNL KVS+ L + +R A Sbjct: 47 SCSRDTIRCFFGFGAAGSSSTGKLKPPKDYAAVHAQAAAAVTAALKAGVQRMEVDFPPLQALNKMGDGSAKNRKLTLESNSAFVTKLVASLSKSVKGKVWIMCCESGTRQYLATSIKGGKAELIDMPSTAKNFPPAAAGDVHVIVTPGDISQWRLARDMGKTAPVVVCNGLFANGFEAFTPVYYFKPISGWGFLLKSYPADWTVFLAGTEEVLPCQVDMMGAGELLRPNLGKVSSLLQSEWGKREA 292
BLAST of mRNA_C-tenellus_contig670.5.1 vs. uniprot
Match: A0A7S2XUE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUE4_9STRA) HSP 1 Score: 202 bits (514), Expect = 3.430e-57 Identity = 102/224 (45.54%), Postives = 140/224 (62.50%), Query Frame = 1 Query: 124 GPKKGPPGNYDAIASQAIAAVQAGLKGGLQAMEVEFPPLGSLNKINDGSAKSRQLAQANTVAFTKKLVGGMGWGK-KVYVVCCQPGVRGDLAKTGGA-----DVRDLDARNLPDAKKGDIQVIVTPADQTQWRLAKQMSETAPVVIVNGVFLNGFVPFEPVYYFKPISGWGSLVRQYPSPFTAYLADSNKVVPCDAELTQQGDLRRPNLAKVSAALSKAFNERA 777 G K G P +Y+ + QA+AAV A +K G + MEVEFPPL +LNK+ DGSAKS ++ + F KKLV + + KV+VVCC+PG + L + G +V L +RNLPDA D+ + +TP D +QW++A ++ ETAPVV+VNG+F NG+ EPVYY KP SGWG L+RQ+P+ FT YL K + + + G+LRRP+ V L F RA Sbjct: 58 GAKTGVPTSYEEVHKQAVAAVGAAIKKGEKKMEVEFPPLAALNKLGDGSAKSAKMIKEANAEFAKKLVTSLTSSRSKVWVVCCEPGYKKMLEEAIGTQNKKVEVVPLSSRNLPDASPKDVLIFLTPGDDSQWKIAAKLGETAPVVVVNGLFNNGYGALEPVYYLKPFSGWGYLMRQFPNDFTVYLTGEKKPLDLKVTMMEMGNLRRPDSTVVGKVLQSEFMNRA 281
BLAST of mRNA_C-tenellus_contig670.5.1 vs. uniprot
Match: A0A6V1Q2S3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q2S3_HETAK) HSP 1 Score: 159 bits (403), Expect = 4.070e-41 Identity = 92/222 (41.44%), Postives = 131/222 (59.01%), Query Frame = 1 Query: 118 FGGPKKGPPGNYDAIASQAIAAVQAGLKGGLQAMEVEFPPLGSLNKINDGSAKSRQLAQANTVAFTKKLVGGMGWGK-KVYVVCCQPGVR---GDLAKTGGADVRDLDARNLPDAKK---GDIQVIVTPADQTQWRLAKQMSETAPVVIVNGVFLNGFVPFEPVYYFKPISGWGSLVRQYPSPFTAYLADS-NKVVPCDAELTQQGDLRRPNLAKVSAALSK 759 F G P NYDA+ QAI++V++ LK +A+EVEFPPL SLNK+ DGS KS+Q A FT+KL + K KV++VC + G++ GD + V L +R+ D+ + D+ V V P+D++QW ++S+ P ++VNGV NG+ F+P YYFKPISG G L++QYP F Y A S NK + + +QG +RP+ AAL K Sbjct: 63 FPNRASGVPSNYDALHQQAISSVKSALKKDKRALEVEFPPLTSLNKLGDGSRKSQQQALQGNADFTRKLCTALSQSKNKVWLVCYELGMKDAVGDYGRNNKVQV--LTSRDKLDSSQFGSNDVVVAVGPSDESQWLSLARLSKVVPSIVVNGVCNNGYYLFDPCYYFKPISGRGYLIKQYPDNFKVYSASSPNKPLDVEVPFLEQGKFKRPDTRVAFAALEK 282
BLAST of mRNA_C-tenellus_contig670.5.1 vs. uniprot
Match: A0A7S0UD48_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UD48_HEMAN) HSP 1 Score: 117 bits (292), Expect = 2.090e-26 Identity = 79/217 (36.41%), Postives = 115/217 (53.00%), Query Frame = 1 Query: 136 GPPGNYDAIASQAIAAVQAGLKGGLQAMEVEFPPLGSLNKINDGSAKSRQLAQANTVAFTKKL---VGGMGWGKKVYVVCCQPGVRGDLAK------TGGADVRDLDARNLPDAKKGDIQVIVTPADQTQWRLAKQMSETAPVVIVNGVFLNGFVPFEPVYYFKPIS----GWGSLVRQYPSPFTAYLADSNKV-VPCDAELTQQGDLRRPNLAKVS 744 G P +YD I +QAI A+ GL GG+ MEVEFPP+ SLNK++DGSA S+++ + V F K+ + G GWG V+++C R ++ K T A +RD P + D+ ++ PAD +QW + +S ++PVV +NG NG FE YY KP++ G L+R P +T Y DS + D Q RP+L +S Sbjct: 1 GVPRSYDEIHAQAIDAIGVGLSGGVTRMEVEFPPIPSLNKLSDGSASSQRMVRNANVDFVLKVAEALSGSGWG--VWILCGDSSTREEVVKRSLPPNTQVALLRD----GPPPSGPSDVLLVHPPADISQWDYSASLSASSPVVALNGQQHNGHSSFEMAYYLKPMTFNSRTCGYLIRSLPGAWTVY--DSQGADMGVDVGFVQTASGFRPDLQAIS 209
BLAST of mRNA_C-tenellus_contig670.5.1 vs. uniprot
Match: A0A7S0XHP6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XHP6_9RHOD) HSP 1 Score: 95.5 bits (236), Expect = 7.580e-19 Identity = 64/190 (33.68%), Postives = 99/190 (52.11%), Query Frame = 1 Query: 100 QLIRCFFGGPKKGPPGNYDAIASQAIAAVQAGLKGGLQAMEVEFPPLGSLNKINDGSAKSRQLAQANTVAFTKKLVGGMGWGKKVYVVCCQPGVRGDLAKTGGADVRD------LDARNLPDAKKGDIQVIVTPADQTQWRLAKQM-SETAPVVIVNGVFLNGFVPFEPVYYFKPISGWGSLVRQYPSPF 648 +L+RC G ++ P +YD I + AIA+V+ L G A E++FP L +LNK+NDGS +S A+ +F KLV + ++ ++C V + + R D L ++ D+ ++V P+ QW ++ + S V++VNG NGF EPV+Y KP SG G L+R YP F Sbjct: 24 RLLRCCEGRDEQFPK-SYDEIHAFAIASVRKALTDGKTACEIDFPLLPALNKLNDGSEQSANQARVACSSFVAKLVQSLP--QRTQILCFDRPVLAAVQNALKSSERSRLWSPTFDRLELDES---DLVIVVMPSGADQWSMSLGLQSRCQGVIVVNGAINNGFDGLEPVFYLKPFSGRGFLLRCYPRDF 207
BLAST of mRNA_C-tenellus_contig670.5.1 vs. uniprot
Match: A0A1Z5KGP4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGP4_FISSO) HSP 1 Score: 58.2 bits (139), Expect = 6.040e-6 Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 1 Query: 121 GGPKKGPPGNYDAIASQAIAAVQAGLKG----GLQAMEVEFPPLGSLNKINDGSAKSRQLAQANTVAFTKKLVGGMGW--GKKVYVVCCQPGVRG--DLAKTGGADVRDLDARNLP-DAKKGDIQVIVTPADQTQWRLAKQMSETAP-VVIVNG 552 GG P + A QAI++++A + +E EFPPLGSLNK+ DGS +S +AF KLV + G +++ AK +V + P + KK D+ V+V P Q+ + AKQ+++ VV+VNG Sbjct: 56 GGSGTIIPSSISARDKQAISSIKAAISKPKTKDFPLIECEFPPLGSLNKLGDGSMRSANQVDDANLAFCSKLVKSIAGILGPNTWLITSAAASMNLAQKAKNVTTNVHSFKSGFQPTNIKKTDVCVVVAPCVQSDYENAKQLAKLCKAVVLVNG 209
BLAST of mRNA_C-tenellus_contig670.5.1 vs. uniprot
Match: A0A1E7EYR6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EYR6_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 9.380e-5 Identity = 57/216 (26.39%), Postives = 90/216 (41.67%), Query Frame = 1 Query: 217 MEVEFPPLGSLNKINDGSAKSR-QLAQANTVAFTKKLVGGMGWGKKVYVVCCQPGVRGDLAK-----TGGADVRDLDA----RNLPDAKKGDIQVIVTPADQTQWRLAKQMSET---APVVIVNGVF-----LNGFVPFEPVYYFKPISG----WGSLVRQYPSPFTAYLADSNKVVPCDAELTQQGD-------LRRPNLAKVSAALSKAFNERA 777 +E+EFPP+ SLNK+ DGS +S ++ AN + ++ + Y K T G DV D A + A G + + ++P+ + + +A+QM+ VVIVNG ++G YY KP++ G L+R YPS +T + V LT D P+L + K+ +ERA Sbjct: 105 IELEFPPIQSLNKLGDGSLRSTIEVDNANLKFYLMDVLNPFKSSIQKYTCISSSSTNSFRTKAQKIATKGIDVIDSSAVAQEEDNNGATVGMVYIFISPSSRGDYMMAQQMANANICKSVVIVNGFAKGPNSISGLATMS--YYLKPLTYNSQIAGYLIRSYPSLWTVLDSSGGGGVKAAKVLTTYTDKDILVQGTNTPDLRASGKLVQKSVDERA 318 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig670.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig670.5.1 >prot_C-tenellus_contig670.5.1 ID=prot_C-tenellus_contig670.5.1|Name=mRNA_C-tenellus_contig670.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=192bp MEVEFPPLGSLNKINDGSAKSRQLAQANTVAFTKKLVGGMGWGKKVYVVCback to top mRNA from alignment at C-tenellus_contig670:11134..14491+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig670.5.1 ID=mRNA_C-tenellus_contig670.5.1|Name=mRNA_C-tenellus_contig670.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3358bp|location=Sequence derived from alignment at C-tenellus_contig670:11134..14491+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig670:11134..14491+ >mRNA_C-tenellus_contig670.5.1 ID=mRNA_C-tenellus_contig670.5.1|Name=mRNA_C-tenellus_contig670.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=576bp|location=Sequence derived from alignment at C-tenellus_contig670:11134..14491+ (Choristocarpus tenellus KU2346)back to top |