mRNA_C-tenellus_contig6561.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig6561.4.1 vs. uniprot
Match: A0A6H5JLR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLR5_9PHAE) HSP 1 Score: 172 bits (435), Expect = 4.270e-43 Identity = 76/111 (68.47%), Postives = 96/111 (86.49%), Query Frame = 2 Query: 914 CKPCGKKFVSEDARQAHLKSHVPCPESGCNFTAVRKVMSGHHASVHGHLSGSGFEMIDVEGQKFRVLLGTNPDEVALWRAERRKNWPSRDNISRKDTEAEKRRSLGDLGPD 1246 C+PC K+F +E ARQAHL+SHVPCPE GC F+A+RK+++ HH + HG LSGSGF+MIDVEG+KFRVLLGT+PDEVA WRAERRK WP+ +N +RK+ + +KRR+LGDLGPD Sbjct: 59 CEPCEKEFTTETARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQLSGSGFQMIDVEGKKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPD 169
BLAST of mRNA_C-tenellus_contig6561.4.1 vs. uniprot
Match: D7FK97_ECTSI (Zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK97_ECTSI) HSP 1 Score: 170 bits (431), Expect = 1.890e-42 Identity = 89/188 (47.34%), Postives = 119/188 (63.30%), Query Frame = 2 Query: 707 AGQTDVLRGGDISRQ----VVGTPKQERGTTKK----GNGDTGFGREGVEVRSATQTAEVGTYEGAAKESAMIVAAECKPCGKKFVSEDARQAHLKSHVPCPESGCNFTAVRKVMSGHHASVHGHLSGSGFEMIDVEGQKFRVLLGTNPDEVALWRAERRKNWPSRDNISRKDTEAEKRRSLGDLGPD 1246 +G+ D+ G ++Q GT G T G + G + S + G G A + + C+PC K+F +E ARQAHL+SHVPCPE GC F+A+RK+++ HH + HG SGSGF+MIDVEG+KFRVLLGT+PDEVA WRAERRK WP+ +N +RK+ + +KRR+LGDLGPD Sbjct: 5 SGRNDINSSGGTAQQQQFKTAGTISNHAGATPTVGAAGARSVASDKPGAQQTSLAAASTAGAAAGGAAKLS------CEPCEKEFTTEAARQAHLQSHVPCPEKGCGFSALRKIVNNHHEAKHGQFSGSGFQMIDVEGKKFRVLLGTSPDEVAEWRAERRKRWPTDENKARKEEDEKKRRALGDLGPD 186
BLAST of mRNA_C-tenellus_contig6561.4.1 vs. uniprot
Match: A0A7S2RYE8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYE8_9STRA) HSP 1 Score: 134 bits (337), Expect = 6.480e-31 Identity = 63/114 (55.26%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 914 CKPCGKKFVSEDARQAHLKSHVPCPESGCNFTAVRKVMSGHHASVHGHLSGSGFEMIDVEG----QKFRVLLGTNPDEVALWRAERRKNWPSRDNISRKDTEAEKRRSLGDLGP 1243 C+ C K+F S AR AHL+SH PCP GC+F A +KV++ H HG SG+G+ I+VE QKFRVL+GT+P+EVA WRAERRKNWPS+ N++RK E +RRS G L P Sbjct: 60 CEACDKEFSSASARDAHLRSHTPCPHPGCSFAASQKVVNAHFEVAHGQFSGTGYREIEVEVGNRMQKFRVLMGTSPEEVAQWRAERRKNWPSKTNLARKSAEQHERRSRGSLDP 173
BLAST of mRNA_C-tenellus_contig6561.4.1 vs. uniprot
Match: A0A1V9Z0Q3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0Q3_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.380e-25 Identity = 52/108 (48.15%), Postives = 74/108 (68.52%), Query Frame = 2 Query: 914 CKPCGKKFVSEDARQAHLKSHVPCPESGCNFTAVRKVMSGHHASVHGHLSGSGFEMIDVEGQKFRVLLGTNPDEVALWRAERRKNWPSRDNISRKDTEAEKRRSLGDL 1237 C+PC K F + +AH+ +H C E GC+F A ++V++ HHA+VHG +GSG + I+VEGQKF VL+G +P+E+A WR ERRK WPS + RK + E+R GD+ Sbjct: 203 CEPCDKHFALKSQHEAHMNTHESCWEPGCDFRACKRVVTAHHATVHGQFAGSGLKEIEVEGQKFTVLVGNSPEEIAKWREERRKKWPSTAVVKRKLEQTEERMLAGDI 310
BLAST of mRNA_C-tenellus_contig6561.4.1 vs. uniprot
Match: A0A2D4C9T5_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C9T5_PYTIN) HSP 1 Score: 110 bits (275), Expect = 1.530e-23 Identity = 45/88 (51.14%), Postives = 63/88 (71.59%), Query Frame = 2 Query: 914 CKPCGKKFVSEDARQAHLKSHVPCPESGCNFTAVRKVMSGHHASVHGHLSGSGFEMIDVEGQKFRVLLGTNPDEVALWRAERRKNWPS 1177 C+PC K F E AHLK+HV CP C+F+A ++V++ HH + HG +GSG + I+VEGQ+F VL+G +P+++ WRAERRK WPS Sbjct: 5 CEPCDKTFPIESQHAAHLKTHVSCPAPDCSFSASKRVVTVHHQTSHGQFAGSGLKEIEVEGQRFMVLVGNSPEDIEKWRAERRKRWPS 92
BLAST of mRNA_C-tenellus_contig6561.4.1 vs. uniprot
Match: A0A1W0ABE8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABE8_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.630e-23 Identity = 52/108 (48.15%), Postives = 72/108 (66.67%), Query Frame = 2 Query: 914 CKPCGKKFVSEDARQAHLKSHVPCPESGCNFTAVRKVMSGHHASVHGHLSGSGFEMIDVEGQKFRVLLGTNPDEVALWRAERRKNWPSRDNISRKDTEAEKRRSLGDL 1237 C+PC K F + AHL +H C E C+F+A ++V++ HH +VHG +GSG + IDVEGQKF VL+G +P+++A WR ERRK WPS + RK E E+R GD+ Sbjct: 669 CEPCDKHFPYKSQYDAHLNTHESCWEPNCDFSACKRVVTSHHQTVHGQFAGSGLKEIDVEGQKFTVLVGNSPEDIAKWREERRKKWPSTSVVKRKMEENEERIRAGDV 776
BLAST of mRNA_C-tenellus_contig6561.4.1 vs. uniprot
Match: W4FQN8_9STRA (C2H2-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQN8_9STRA) HSP 1 Score: 110 bits (276), Expect = 7.340e-23 Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 914 CKPCGKKFVSEDARQAHLKSHVPCPESGCNFTAVRKVMSGHHASVHGHLSGSGFEMIDVEGQKFRVLLGTNPDEVALWRAERRKNWPSRDNISRKDTEAEKRRSLGDL 1237 C+PC K F + AH+ +H C GC+F+A ++V++ HH + HG +GSG + I+VEGQKF VL+G +P+++ WR ERRK WPS N+ RK+ + + R GD+ Sbjct: 232 CEPCEKHFAMKSQFDAHVLTHEACWAPGCDFSASKRVVTSHHQTAHGQYAGSGLKEIEVEGQKFHVLVGNSPEDITKWREERRKKWPSDANVKRKNDQHQDRVQAGDV 339
BLAST of mRNA_C-tenellus_contig6561.4.1 vs. uniprot
Match: A0A024T851_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T851_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.080e-22 Identity = 47/109 (43.12%), Postives = 73/109 (66.97%), Query Frame = 2 Query: 911 ECKPCGKKFVSEDARQAHLKSHVPCPESGCNFTAVRKVMSGHHASVHGHLSGSGFEMIDVEGQKFRVLLGTNPDEVALWRAERRKNWPSRDNISRKDTEAEKRRSLGDL 1237 +C+PC K F + AH+ +H C GC+F+A ++V++ H+ +HG +GSG + I+VEGQKF+VL+G +P+E+ WR ERRK WPS N+ RK+ + +R GD+ Sbjct: 233 QCEPCEKHFAMKSQYDAHMLTHEQCWAPGCDFSASKRVVTSHYQVMHGQYAGSGLKEIEVEGQKFQVLVGNSPEEITKWREERRKKWPSESNVKRKNEQMGERVQAGDI 341
BLAST of mRNA_C-tenellus_contig6561.4.1 vs. uniprot
Match: A0A8K1CJ96_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJ96_PYTOL) HSP 1 Score: 112 bits (279), Expect = 2.990e-22 Identity = 47/95 (49.47%), Postives = 64/95 (67.37%), Query Frame = 2 Query: 914 CKPCGKKFVSEDARQAHLKSHVPCPESGCNFTAVRKVMSGHHASVHGHLSGSGFEMIDVEGQKFRVLLGTNPDEVALWRAERRKNWPSRDNISRK 1198 C+ C K F E AHLK+HVPCP C F+A ++V+ H + HG +G G + IDVEGQKF VL+G +P+++A WRAERRK WPS +++K Sbjct: 393 CEACEKSFAIESQHVAHLKTHVPCPSPDCEFSASKRVVGAHFQTAHGQYAGQGLKEIDVEGQKFMVLVGNSPEDIAKWRAERRKRWPSNALVNQK 487
BLAST of mRNA_C-tenellus_contig6561.4.1 vs. uniprot
Match: W4FR42_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FR42_9STRA) HSP 1 Score: 110 bits (276), Expect = 3.440e-22 Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 914 CKPCGKKFVSEDARQAHLKSHVPCPESGCNFTAVRKVMSGHHASVHGHLSGSGFEMIDVEGQKFRVLLGTNPDEVALWRAERRKNWPSRDNISRKDTEAEKRRSLGDL 1237 C+PC K F + AH+ +H C GC+F+A ++V++ HH + HG +GSG + I+VEGQKF VL+G +P+++ WR ERRK WPS N+ RK+ + + R GD+ Sbjct: 232 CEPCEKHFAMKSQFDAHVLTHEACWAPGCDFSASKRVVTSHHQTAHGQYAGSGLKEIEVEGQKFHVLVGNSPEDITKWREERRKKWPSDANVKRKNDQHQDRVQAGDV 339 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6561.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig6561.4.1 >prot_C-tenellus_contig6561.4.1 ID=prot_C-tenellus_contig6561.4.1|Name=mRNA_C-tenellus_contig6561.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=548bp MSHDRLNYEMMNQNQGRSHIHGQGIINPIGPPPIGHFQVQQQQQQHHPPPback to top mRNA from alignment at C-tenellus_contig6561:4016..7186+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig6561.4.1 ID=mRNA_C-tenellus_contig6561.4.1|Name=mRNA_C-tenellus_contig6561.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3171bp|location=Sequence derived from alignment at C-tenellus_contig6561:4016..7186+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig6561:4016..7186+ >mRNA_C-tenellus_contig6561.4.1 ID=mRNA_C-tenellus_contig6561.4.1|Name=mRNA_C-tenellus_contig6561.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1644bp|location=Sequence derived from alignment at C-tenellus_contig6561:4016..7186+ (Choristocarpus tenellus KU2346)back to top |