mRNA_C-tenellus_contig11047.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig11047.2.1
Unique NamemRNA_C-tenellus_contig11047.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: D8LJZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ6_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 6.460e-79
Identity = 137/263 (52.09%), Postives = 175/263 (66.54%), Query Frame = 1
Query:   31 SQTPGVRRSGRQRMPPLKWWKGDHVVYEAEKEGVLAVAGIVKGQPTPVQS---RKRGRTGVGAIGGGLGGSKRGR--------LEPLSPSKLTALPQGS---YLRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKAGSAAQAFSVPAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLKV 777
            S TPGVRRSGRQR+ PLK+W+GD++ Y  +++G+    GIVKG   P  S   RKRG  G           KR R        + PLSPSK++ + +      + K++ C+VWDE+TA    RQVVM S NLV + +  T  R PGK+K G AAQAF V  E  IS WL+G L+LPP A+KD+EHVA STQIY V + QP+ALE+A+AMP  + +   FD  TAQRFLLSPGDHFY+PVNN+YRLENHS  A A+IYWT++K+
Sbjct:  559 SHTPGVRRSGRQRVAPLKFWRGDNIQYGVDEKGLQVAEGIVKGPALPEPSSPSRKRGSEG----------KKRRRPPAVKDEHMSPLSPSKVSEMRKSKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRAPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDRAKAVIYWTIIKI 811          
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: A0A6H5KZX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZX0_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 2.790e-78
Identity = 136/254 (53.54%), Postives = 173/254 (68.11%), Query Frame = 1
Query:   31 SQTPGVRRSGRQRMPPLKWWKGDHVVYEAEKEGVLAVAGIVKGQPTPVQS---RKRGRTGVGAIGGGLGGSKRGRLEPLSPSKLTALPQGS---YLRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKAGSAAQAFSVPAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774
            S TPGVRRSGRQR+ PLK+W+GD++ Y  +++G+    GIVKG   P  S   RKRG  G G         K   + PLSPSK++ + +      + K++ C+VWDE+TA    RQVVM S NLV + +  T  R PGK+K G AAQAF V  E  IS WL+G L+LPP A+KD+EHVA STQIY V + QP+ALE+A+AMP  + +   FD  TAQRFLLSPGDHFY+PVNN+YRLENHS  A A+IYWT++K
Sbjct:  657 SHTPGVRRSGRQRVAPLKFWRGDNIQYGVDEKGLQVAEGIVKGPALPEPSSTSRKRG--GEGKKRRRPPAVKDEHMSPLSPSKVSEMRKNKKFKLMEKDQKCLVWDEETAAFKTRQVVMSSSNLVSHDVTATHQRAPGKEKIGQAAQAFLVGPEVGISEWLTGRLELPPGAIKDSEHVALSTQIYVVAEGQPDALEIAIAMPSKKTKRTTFDAKTAQRFLLSPGDHFYVPVNNVYRLENHSDRAKAVIYWTIIK 908          
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: A0A7S2FXX0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FXX0_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.870e-46
Identity = 91/256 (35.55%), Postives = 147/256 (57.42%), Query Frame = 1
Query:   31 SQTPGVRRSGRQRMPPLKWWKGDHVVYEAEKEGV----LAVAGIVKGQPTPVQSRKRGRTGVGAIGGGLGGSKRGRLEPLSPSKLTALPQGSYLRKEEACVVWDEDTAEHVKRQVVMRSDNL--VQNQLEPTGHRVPGK-DKAGSAAQAFSV-PAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774
            S + G RRS RQR P L++W+ + ++YE  ++G+      VAGI +   TP    ++ R             K   +    P +++ LP+    +  +   VW+E  A+  K +++ RS  +   + +L  T  R PG+ D  G AAQ F + P  + I GW+SG + LPP A+KDAE V   +Q+++V +CQP + E+A+AMP ++     F+P +AQR+LLSPGD F++   N+YRL+NHS + D  ++WT++K
Sbjct:    3 SDSSGARRSKRQRYPVLEYWRNERMIYERPEDGLGEVLPMVAGISERSKTPAAPTRKKRP-----------RKDISMSQPVPIQVSDLPEQYEFKDSDKGRVWNEKEAKASKMKIICRSKAMKKTERELPITADRDPGEEDLVGVAAQGFLMNPMSSAIPGWISGYVTLPPRAIKDAEGVGYCSQVFFVAECQPGSFEVAIAMPQDQ--QIVFEPESAQRYLLSPGDQFFVAPGNVYRLQNHSKKVDCKLFWTIIK 245          
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: A0A7S2SRM5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRM5_9STRA)

HSP 1 Score: 168 bits (426), Expect = 8.750e-46
Identity = 103/263 (39.16%), Postives = 142/263 (53.99%), Query Frame = 1
Query:    7 LGIKKEKGSQTPGVRRSGRQRMPPLKWWKGDHVVYEAEK-----EGVLAVAGIVKGQPTPVQSRKRGRTGVGAIGGGLGGSKRGRLEPLSPSKLTALPQGSYLRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKD-KAGSAAQAFSVP-AEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774
            +G+  + GS     RRS R R PPL +WK +  VYE        E +  VAG+ +   TP  + ++ R     I        RG   P        LPQG   +K E   VW E+     K  V+ RS  L + +L  T  R   +  + G+AAQAF V  A  D+  W+SG + LPP A+KD E V  S+Q+++V DCQP +LE+A+ +  ++ R   FD +TAQRFLLS GD FYIP  NIYRLENHS + D  I+W +++
Sbjct:  204 VGVTPDDGS----ARRSRRVRYPPLAYWKNERYVYERRASEGLGEVLPTVAGVSERTKTPAAAARKKRPRPRKI-------DRGNALPSKD-----LPQGREFKKHEKAKVWSEEAQRQRKMTVIARSSQLEEGELPITAKRTKDESSRVGAAAQAFKVESAGPDLPTWISGHVVLPPHAIKDPERVGNSSQVFFVADCQPKSLEVAIGL--DQDRPTDFDRATAQRFLLSSGDQFYIPPFNIYRLENHSEDQDCKIFWAIIQ 448          
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: A0A835YQ32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ32_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.320e-39
Identity = 78/166 (46.99%), Postives = 107/166 (64.46%), Query Frame = 1
Query:  298 LRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKAGS---AAQAFSV--PAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALA-MPDNEVRN-DFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774
            +R EE+C+V+D D     ++Q++ R+D+LV   L    H   G+ +  +   AA+AFSV   A   +S W SG L LPP  +K AE V   TQ+YWV  C+P +LELA+A +P+   R  D FD +TAQR+LLSPGDHFY+P  N+YRLENH+ +ADA I W +L 
Sbjct:    1 MRMEESCLVYDVDARGEEQKQIIFRNDSLVYQSL----HLADGQAENSAPCQAARAFSVRGAAACGLSSWSSGALTLPPRGLKAAERVDDHTQLYWVTSCRPYSLELAIAKIPEGSDRPADAFDDATAQRYLLSPGDHFYVPPRNVYRLENHAPDADAQICWAILN 162          
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: B8BWA8_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWA8_THAPS)

HSP 1 Score: 155 bits (391), Expect = 2.730e-39
Identity = 100/272 (36.76%), Postives = 144/272 (52.94%), Query Frame = 1
Query:   34 QTPG---VRRSGRQRMPPLKWWKGDHVVYEAEKEGVL---------AVAGIVKGQPTPVQSRK------RGRTG----VGAIGGGLGGSKRGRLEPLSPSKLTALPQGSYLRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKA-GSAAQAFSVPAEAD--ISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774
            +TPG   +RRS R R  PL++WK + ++YEA+ E  L          V+G+ K +PTP + RK      + + G              S  G     +P     L +   L   E   +W E   +  + +VV R DN   ++L  +  R   + K  G A+QAF VP + D    G++SG + LPP  +KDAE V   +Q++ VGDCQPN+LE ALA P N+  +  F+  TAQR+LLS GD F IP  N+YR+ENHS    A ++WT++K
Sbjct:  526 RTPGGTEIRRSHRARFKPLQFWKNEKLIYEAQNESGLLGEAMGDMPVVSGVHKAKPTPYKERKVTVKPKQEKNGKXXXXXXXXXXXXXSYDGGPNAKNPFDPKTLGKKYQLNNGEHGSIWSETLEDTTESKVVSRLDNRSFSKLPLSNTRKKKESKVVGFASQAFHVPTDQDDLFPGYISGNVVLPPRGIKDAEGVGLCSQVFNVGDCQPNSLEFALADPTNQ--DGEFNAKTAQRYLLSKGDMFQIPPGNVYRIENHSKTDKACLFWTIIK 795          
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: A0A6S8DDY6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8DDY6_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.880e-39
Identity = 95/267 (35.58%), Postives = 133/267 (49.81%), Query Frame = 1
Query:    1 MVLGIKKEKGSQTPGVRRSGRQRMPPLKWWKGDHVVYEAEKEGVLAVAGIVK-GQPTPVQSRKRGRTGVGAIGGGLGGSKRGRLEPLSPSKLTALPQGSYLRKEEA--CVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKAGSAAQAFS-----VPAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPD-NEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774
            M +  KK+   +  GVRRS RQ+ PP++WWK + V+Y  + E     A  V+  +PTP   +K                       ++ +K T +    Y   EE     +WDE         VV R   L   +L  T  R P      SAAQA S     + A   ++ WLSG L +PP A+KD E V   +Q+++V  CQP ALELA+A P  +  R   F+P  A RFLL+PGD F+IP NN+YR+EN S    A I+W +++
Sbjct:  183 MPISEKKKANQEDRGVRRSRRQKFPPMQWWKNERVIYTLDTEIEAPTATAVELAEPTPRPIKKX-------------------XXAINNNKDTII-SSEYFADEEGGQAQIWDELRRRSEMTIVVSRESELQTTKLPGTSSRRPDNAPLASAAQALSNEAYELDANLCLAAWLSGQLIMPPRAIKDEESVGLCSQVFFVASCQPGALELAIASPSIDSNRPPNFEPDQAVRFLLAPGDQFHIPPNNMYRIENRSTTQLAKIFWCIMR 429          
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: A0A7S2R7M7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R7M7_9STRA)

HSP 1 Score: 135 bits (339), Expect = 5.700e-36
Identity = 68/158 (43.04%), Postives = 100/158 (63.29%), Query Frame = 1
Query:  310 EACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGK-DKAGSAAQAFSVPAEAD--ISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774
            E   +WDE   E V+ ++   S+N++ + L  +  R   + DK G AAQ+F++ A  D  + GW++G L+LPP ++KDAE V    Q++ VG CQP ALE+A+A P  E     F   ++QRFLLS GD F+IP  NIYRLENHS   + L++WT+++
Sbjct:    9 EVAYIWDEAEGEIVEDKIFCYSENMIGSDLPLSAKRSKREGDKVGMAAQSFNIAASTDNVLPGWIAGNLRLPPKSIKDAEGVGLCAQVFNVGQCQPKALEVAIADP--EENGGKFSDKSSQRFLLSTGDMFHIPPGNIYRLENHSSSEECLLFWTIVR 164          
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: K0TMS8_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TMS8_THAOC)

HSP 1 Score: 139 bits (349), Expect = 6.440e-34
Identity = 96/275 (34.91%), Postives = 139/275 (50.55%), Query Frame = 1
Query:   37 TPG---VRRSGRQRMPPLKWWKGDHVVYEAEKE-GVLA--------VAGIVKGQPTPVQSRKR-------------GRTGVGAIGGGLGGSKRGRLEPL-SPSKLTALPQGSYLRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKA-GSAAQAFSVPAEAD--ISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774
            TPG   +RRS R R  PL +WK + +VY+ ++E G+L         VAG++   PTP + RK                                  EP   P    +L +   +R  E+  VW E     +  +VV R D    ++L     R   + K  G A+QAF V  + D    G+++G + +PP  +KDAE V   +Q++ VGDCQPN++E ALA P+ +  +  FDP TAQR+LLS GD F IP  N+YR+ENHS    A ++WT++K
Sbjct:  322 TPGGSRLRRSRRARFKPLDFWKNEKLVYKPQREPGLLGEAMGDMPVVAGVMHALPTPYRERKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSREPFDDKSLRKKYKIRTGESGHVWSETLENTLPAKVVSRLDGRSFSKLPLCSDRKKRESKVVGFASQAFHVQTDDDDLFPGYIAGNVVMPPRGIKDAEGVGLCSQVFNVGDCQPNSVEFALADPNGQ--DGEFDPRTAQRYLLSKGDMFQIPPGNVYRIENHSKTDRATLFWTIVK 594          
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Match: K3WQF2_GLOUD (CENP-C_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQF2_GLOUD)

HSP 1 Score: 138 bits (348), Expect = 1.010e-33
Identity = 84/253 (33.20%), Postives = 132/253 (52.17%), Query Frame = 1
Query:   43 GVRRSGRQRMPPLKWWKGDHVVYEAEKEGV----LAVAGIVK-GQPTPVQSRKRGRTGVGAIGGGLGGSKRGRLEP----LSPSKLTALPQGSYLRKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKAGSAAQAFSVPAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALELALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADALIYWTVLK 774
            GVRRS R+R  PL W+KG+H VYE  + GV      VAGI + G  TP ++ ++              +K+    P    + P   ++LP+G      E   ++D       K  V+ R+  +   +L      VPG      A Q+F++      S W+ G L LPP A K+AE V  + Q+++V +CQP A+E++       V +++FD + A RFLL+PGD FY+P  N Y L+N+S +A   +++T++K
Sbjct:  372 GVRRSKRKRFKPLAWYKGEHYVYERRESGVGLVIPTVAGIERVGTTTPTKTARKY-------------TKKSHSNPQRKAIKPFPKSSLPKGLKYEDGEWADLYDTSAGCINKMNVICRASEIEHRELPSVDGEVPG-----FAGQSFNLRNSHPFSRWICGRLGLPPGAAKEAESVGEAVQVFYVTNCQPGAVEVSFG----PVTDEYFDTTKATRFLLNPGDEFYVPSRNAYYLKNYSEKATCDLHFTIMK 602          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11047.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJZ6_ECTSI6.460e-7952.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZX0_9PHAE2.790e-7853.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2FXX0_9STRA1.870e-4635.55Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2SRM5_9STRA8.750e-4639.16Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YQ32_9STRA1.320e-3946.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B8BWA8_THAPS2.730e-3936.76Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A6S8DDY6_9STRA2.880e-3935.58Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2R7M7_9STRA5.700e-3643.04Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
K0TMS8_THAOC6.440e-3434.91Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
K3WQF2_GLOUD1.010e-3333.20CENP-C_C domain-containing protein n=1 Tax=Globisp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11047contigC-tenellus_contig11047:2055..4952 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJZ6
PFAMsCENP-C_C
Model size783
Max annot lvl2759|Eukaryota
KEGG koko:K11497
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.06e-79
EggNOG OGs29KWX@1|root,2RU66@2759|Eukaryota
Cds size783
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789160.654575-CDS-C-tenellus_contig11047:2054..22361680789160.654575-CDS-C-tenellus_contig11047:2054..2236Choristocarpus tenellus KU2346CDSC-tenellus_contig11047 2055..2236 +
1680789160.6687622-CDS-C-tenellus_contig11047:2769..29451680789160.6687622-CDS-C-tenellus_contig11047:2769..2945Choristocarpus tenellus KU2346CDSC-tenellus_contig11047 2770..2945 +
1680789160.677725-CDS-C-tenellus_contig11047:3864..39591680789160.677725-CDS-C-tenellus_contig11047:3864..3959Choristocarpus tenellus KU2346CDSC-tenellus_contig11047 3865..3959 +
1680789160.6863894-CDS-C-tenellus_contig11047:4209..43831680789160.6863894-CDS-C-tenellus_contig11047:4209..4383Choristocarpus tenellus KU2346CDSC-tenellus_contig11047 4210..4383 +
1680789160.6999645-CDS-C-tenellus_contig11047:4796..49521680789160.6999645-CDS-C-tenellus_contig11047:4796..4952Choristocarpus tenellus KU2346CDSC-tenellus_contig11047 4797..4952 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11047.2.1prot_C-tenellus_contig11047.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig11047 2055..4952 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig11047.2.1

>prot_C-tenellus_contig11047.2.1 ID=prot_C-tenellus_contig11047.2.1|Name=mRNA_C-tenellus_contig11047.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=261bp
MVLGIKKEKGSQTPGVRRSGRQRMPPLKWWKGDHVVYEAEKEGVLAVAGI
VKGQPTPVQSRKRGRTGVGAIGGGLGGSKRGRLEPLSPSKLTALPQGSYL
RKEEACVVWDEDTAEHVKRQVVMRSDNLVQNQLEPTGHRVPGKDKAGSAA
QAFSVPAEADISGWLSGTLQLPPTAVKDAEHVARSTQIYWVGDCQPNALE
LALAMPDNEVRNDFFDPSTAQRFLLSPGDHFYIPVNNIYRLENHSLEADA
LIYWTVLKVS*
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mRNA from alignment at C-tenellus_contig11047:2055..4952+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig11047.2.1 ID=mRNA_C-tenellus_contig11047.2.1|Name=mRNA_C-tenellus_contig11047.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2898bp|location=Sequence derived from alignment at C-tenellus_contig11047:2055..4952+ (Choristocarpus tenellus KU2346)
ATGGTTCTTGGAATAAAAAAAGAAAAAGGAAGTCAGACTCCAGGGGTAAG GCGCTCGGGTCGTCAGCGGATGCCACCTTTGAAGTGGTGGAAGGGCGATC ATGTAGTATATGAAGCAGAAAAGGAAGGTGTATTAGCTGTGGCCGGTATC GTTAAGGGGCAGCCCACCCCTGTGCAGTCCAGGTTTGGTCATACAACTTT TCCTTCTTTGGAGGGGGGGGTTGTTGAAATGATGATGTGGGACTGTGAGT TCATAGAGTGTACTCTTGCACATGAGGATGTAGTGGACTTTGCCTGTTGT GTCTTGTGATGTACAACAGTTTTGTTCCACCTTTTTTCAGGGGAAGTGAG TGGTCATCTCTGAAGAGAAGTGTACCCTGATTTGGGGAACGGAGTAGCTA TGAAGCACATTGTTGAGGTGCTATTTCAGCGAACACATGTGTGTCCTTTG TCTGGATACAAGTGTGTTGCTTGTGGAGGAGAAGGTTGATGAGGGTAGAG TGTCAGCAGAGTTGACTGTTACCACGGTAGATCAGTTTCCCATTTTTCAA GGAAGCAGGAGATAGCAGAATCTCTCCCCCCTTGCAGCACATCATGTACA AGGCACTGCCACTTCTTACCTGTCAAAACTCATACGTACACAGACTAGAG TGTGGGTTCGTGGGTTTTACTGGCCAATCTCATTGCATGGTTTTCATTGG CCAATTACATTGCAGGAAGCGTGGGCGCACAGGGGTTGGGGCCATAGGGG GAGGTCTGGGTGGGAGCAAGAGGGGCAGGCTGGAGCCCCTGAGCCCATCA AAGCTGACGGCATTGCCTCAAGGGAGTTATCTGAGGAAGGAGGAGGCATG TGTTGTGTGGGATGAGGACACTGCGGAGCATGTTAAGAGGCGTGAGTGGT ATTTTGAGATGTTGCATACTTGGGGGTGGTGGACTCCAATCGTTTCTGAA AATGGTGTATTTATGCAATTGTATGCATGAGGTGGCGTTTGGTGGTGTAC TAGGTCTAGTCAAGTAATTCAATCATTTTGTTACTGATTCTTTTCTTCTT TCTGGAATTGCTTCTATTGTTGAGGTGAAATTGCCCTCTCTTCCCCTTTT TCTCCCCTACTCTAGGCCTCTCTCTACACCTGTGACAGATTTATGAAACC TTTTCAGAATATTTTTTGAAGGTTAATTTTTGTAGAGTATTGAGTTGTTT TTTCATGGTATCAGTACCTTGAATTGTTAGGAAACAGGGTTTGATCTCCC TCTGACAAACGCTCAACTTCAAAACGTACTCACTGATATTCTGCACATTT TGAAACCTGTTGCAAAATAAAAACAGTTTTTGTGTGTCCAGTATCTATGT ATTGCCTACTCACCCTGGGAACTCCCAGCTCAACAATCTCCCTCTCTCAA TTTGTTGTGTCCCCGTTCAAGCTGTTATCATATCTTGGTACTCTGTTTAG ACTAGCTCTGTGGCTAGCGTAAGGTAGTATTCTTCACCCTGTGCCTCTTT TTATTTTTATCAAGCACAAGTTGCATCTGCTTTGGTGGTGAAGCACTGTA CAGTGTGGCCAATGTAATGTGGTCTCATTTGCTTTAGGAGGACAATCAAG GCTGACAATCGTAACACACCACAGTGATTAGTTACATTAGACACACACAC ACACAACCTCCCCCCTCCCATCTCAAACCCCGTTGTGAGGGAATAGGAGT CCCAATCACAGGTTCCGCTGGGGACCAACAGCTCAAATGGTCTTACCCTA CTACCCCCACCCCAACCCTCCTCTTCAACGTATGGCTGCTATATATATCT CTTCCTGAAGAGGTGGTTATGCGATCCGACAACTTGGTTCAGAATCAGTT GGAACCGACAGGTCACCGAGTACCAGGGAAGGACAAGGCTGGGTCGGCAG CACAGGTGCGGTGAGGTGGGGAGTAGAGAGGTGTGAGGTGGGATGGCAAC GATTATAACTGAAATATGACATGACATGAGAGATACGAAGATGTAGGGTG TATAGAAGGTTTCAGAATAAATGCGCACCACTCACTTGAATGATAGTTTC ACATTCTATTGGTATCAATGATGCTTTTCTGCCCACACACTCTCCCACTT GAATGGATTTTTTTACTTATTACTTGGGGGTTGGGATCGGCATTTGTATA CACAGGCATTTAGCGTCCCTGCAGAGGCAGATATCTCTGGTTGGCTGTCT GGGACCCTCCAACTGCCTCCAACAGCTGTGAAGGATGCAGAACATGTGGC TAGAAGCACACAGATATACTGGGTTGGGGACTGCCAGCCCAACGCCCTTG AGCTGGCTCTGGCCATGCCTGACAATGAGGTAGGGTACAAAAAAATCCAA TCACAGTTAACGACTGTAAAGCGACATACAGTCATTATGATAAGTGCTGT TGGTATCAGTTGGAGTTACTCTGCACTGTAAAAAACTTGGCTGCAATATA GAGTAGAAATTCATTCTGCACGAAGAGTCTTAATCGTTGTCCATGGATGA ACTGTAACGACTGTTTGGGGAGGAAATTGGATCCATTGAATGGATGGAAC CTCTCTATCTTAGGGACTTTTGGTACATGATGTCAACACCTAGAGGGAGA GTGGTATGTCATGGTTGGACGAATTGGTGCCTTCTCCCCATATCTCTCCT CATCTCCAATCCCCAAAACCTTAACTCACCCTCATGCTCATGTAAAACTA AGCCCATAGCCCACTCCTATCCCTCATTGATTGCTTCACAAGGTGCGGAA CGATTTTTTCGACCCCAGCACTGCCCAGCGCTTTCTCCTGTCCCCCGGGG ACCACTTTTACATCCCTGTGAACAATATTTACCGTCTTGAAAACCATTCA CTTGAGGCAGATGCTCTCATTTATTGGACTGTGCTCAAGGTGAGTTGA
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Coding sequence (CDS) from alignment at C-tenellus_contig11047:2055..4952+

>mRNA_C-tenellus_contig11047.2.1 ID=mRNA_C-tenellus_contig11047.2.1|Name=mRNA_C-tenellus_contig11047.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=783bp|location=Sequence derived from alignment at C-tenellus_contig11047:2055..4952+ (Choristocarpus tenellus KU2346)
ATGGTTCTTGGAATAAAAAAAGAAAAAGGAAGTCAGACTCCAGGGGTAAG
GCGCTCGGGTCGTCAGCGGATGCCACCTTTGAAGTGGTGGAAGGGCGATC
ATGTAGTATATGAAGCAGAAAAGGAAGGTGTATTAGCTGTGGCCGGTATC
GTTAAGGGGCAGCCCACCCCTGTGCAGTCCAGGAAGCGTGGGCGCACAGG
GGTTGGGGCCATAGGGGGAGGTCTGGGTGGGAGCAAGAGGGGCAGGCTGG
AGCCCCTGAGCCCATCAAAGCTGACGGCATTGCCTCAAGGGAGTTATCTG
AGGAAGGAGGAGGCATGTGTTGTGTGGGATGAGGACACTGCGGAGCATGT
TAAGAGGCAGGTGGTTATGCGATCCGACAACTTGGTTCAGAATCAGTTGG
AACCGACAGGTCACCGAGTACCAGGGAAGGACAAGGCTGGGTCGGCAGCA
CAGGCATTTAGCGTCCCTGCAGAGGCAGATATCTCTGGTTGGCTGTCTGG
GACCCTCCAACTGCCTCCAACAGCTGTGAAGGATGCAGAACATGTGGCTA
GAAGCACACAGATATACTGGGTTGGGGACTGCCAGCCCAACGCCCTTGAG
CTGGCTCTGGCCATGCCTGACAATGAGGTGCGGAACGATTTTTTCGACCC
CAGCACTGCCCAGCGCTTTCTCCTGTCCCCCGGGGACCACTTTTACATCC
CTGTGAACAATATTTACCGTCTTGAAAACCATTCACTTGAGGCAGATGCT
CTCATTTATTGGACTGTGCTCAAGGTGAGTTGA
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