mRNA_C-tenellus_contig10957.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10957.2.1
Unique NamemRNA_C-tenellus_contig10957.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10957.2.1 vs. uniprot
Match: A0A6H5K075_9PHAE (DUF4470 domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K075_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 3.900e-15
Identity = 44/80 (55.00%), Postives = 52/80 (65.00%), Query Frame = 1
Query:   58 DAPRADVLLLGCGDARHALYSLWAHLSGL-RGSGRWDGV--------------GARALSFTLNDKEPAVLARVLLLLHMF 252
            DA RAD+LLLGC DARHAL++LW + S   R  GRWDG+              G R L FT+ND+EPA LARVLLLL +F
Sbjct:    2 DARRADMLLLGCSDARHALFTLWTYGSECSRERGRWDGLTSEERRQQNQQDPDGLRTLRFTMNDREPACLARVLLLLQLF 81          
BLAST of mRNA_C-tenellus_contig10957.2.1 vs. uniprot
Match: D8LNQ8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNQ8_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 7.850e-13
Identity = 43/78 (55.13%), Postives = 52/78 (66.67%), Query Frame = 1
Query:   16 GSTPPENMLQNLPADAPRADVLLLGCGDARHALYSLWAHLSGLRGSGRWDGVGARALSFTLNDKEPAVLARVLLLLHM 249
            G+TPP ++LQ++P DA RAD+L LGC D R  LYS+  H  G RG     G   R LSFTLND EPA+ AR L+LL M
Sbjct:   30 GNTPPTDLLQHVPHDAERADILSLGCSDLRDLLYSVLLH--GRRGVSC--GPVPRQLSFTLNDWEPAIHARNLMLLQM 103          
BLAST of mRNA_C-tenellus_contig10957.2.1 vs. uniprot
Match: D7FXN8_ECTSI (MYND-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXN8_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.780e-11
Identity = 40/79 (50.63%), Postives = 51/79 (64.56%), Query Frame = 1
Query:   16 GSTPPENMLQNLPADAPRADVLLLGCGDARHALYSLWAHLSGLRGSGRWDGVGARALSFTLNDKEPAVLARVLLLLHMF 252
            G+TPP ++LQ++P DA  A++L LGCGD R  LYS+  H  G RG     G   R  SF +ND EPA+ AR L+LL MF
Sbjct:   54 GNTPPTDLLQHIPHDAQHAEILSLGCGDLRDFLYSVLLH--GRRGVSC--GHVPRRFSFMMNDWEPAIHARNLMLLQMF 128          
BLAST of mRNA_C-tenellus_contig10957.2.1 vs. uniprot
Match: A0A0C2X864_AMAMK (MYND-type domain-containing protein n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2X864_AMAMK)

HSP 1 Score: 58.2 bits (139), Expect = 5.930e-8
Identity = 33/75 (44.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:   16 GSTPPENMLQNLPADAPRADVLLLGCGDARHALYSLWAHLSGLRGSGRWDGVGARALSFTLNDKEPAVLARVLLL 240
            G+TP   +  ++P + P AD+LLLGCGDAR+ LY+++A            G+ +R L FT  D EPAVLAR ++L
Sbjct:   17 GNTPAVCLTSDIPPEVP-ADILLLGCGDARNVLYTIYAD----------PGIPSRKLDFTCCDVEPAVLARNVML 80          
BLAST of mRNA_C-tenellus_contig10957.2.1 vs. uniprot
Match: UPI0020081F7F (uncharacterized protein n=1 Tax=Antrodia serialis TaxID=139415 RepID=UPI0020081F7F)

HSP 1 Score: 57.8 bits (138), Expect = 8.100e-8
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 1
Query:   16 GSTPPENMLQNLPADAPRADVLLLGCGDARHALYSLWAHLSGLRGSGRWDGVGARALSFTLNDKEPAVLARVLLL 240
            G+T    + Q+LP +   ADVLLLGCGDAR+ LY+++A L       R    GAR L FT  D EPA+LAR +LL
Sbjct:   17 GNTSAICLTQDLPVEQA-ADVLLLGCGDARNVLYTIYADL-------RSRADGARRLDFTCCDIEPAILARNILL 83          
BLAST of mRNA_C-tenellus_contig10957.2.1 vs. uniprot
Match: A0A8H3HU61_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3HU61_9AGAM)

HSP 1 Score: 57.0 bits (136), Expect = 1.530e-7
Identity = 32/78 (41.03%), Postives = 47/78 (60.26%), Query Frame = 1
Query:   16 GSTPPENMLQNLPADAPRADVLLLGCGDARHALYSLWAHLSGLRGSGRWDGVGARALSFTLNDKEPAVLARVLLLLHM 249
            G+TP  ++ Q+L  +   AD+LLLGCGD R+ L++L++ L+          +G R L  T  D EPAVLAR +LL  +
Sbjct: 1207 GNTPAISLTQDLSPEQSAADILLLGCGDPRNILFTLYSDLT----------IGTRKLDITCCDIEPAVLARNILLFSL 1274          
BLAST of mRNA_C-tenellus_contig10957.2.1 vs. uniprot
Match: A0A8H6WD23_MYCCL (MYND-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A8H6WD23_MYCCL)

HSP 1 Score: 56.6 bits (135), Expect = 2.060e-7
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 1
Query:   16 GSTPPENMLQNLPADAPRADVLLLGCGDARHALYSLWAHLSGLRGSGRWDGVGARALSFTLNDKEPAVLARVLLLLHM 249
            G+TP  ++L++L A    A++LLLGCGD RH LYS++     L+          RAL FT  D +PAVLAR ++LL M
Sbjct:   17 GNTPASSLLRDL-APEESANILLLGCGDPRHILYSIFCEGPSLK----------RALDFTCCDIDPAVLARNVILLTM 83          
BLAST of mRNA_C-tenellus_contig10957.2.1 vs. uniprot
Match: A0A5C3ND32_9AGAM (MYND-type domain-containing protein n=1 Tax=Heliocybe sulcata TaxID=5364 RepID=A0A5C3ND32_9AGAM)

HSP 1 Score: 56.2 bits (134), Expect = 2.830e-7
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 1
Query:   16 GSTPPENMLQNLPADAPRADVLLLGCGDARHALYSLWAHLSGLRGSGRWDGVGARALSFTLNDKEPAVLARVLLL 240
            G+TP   + Q+LP     ADVLLLGCGDAR+ LY+++A L    G    +  G R L FT  D +PA+LAR +LL
Sbjct:   17 GNTPAVCLTQDLPP-GQSADVLLLGCGDARNVLYTVYADLPVPSGEVSLND-GPRKLDFTCCDYQPAILARNILL 89          
BLAST of mRNA_C-tenellus_contig10957.2.1 vs. uniprot
Match: S8BX88_DACHA (MYND-type zinc finger protein samB n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8BX88_DACHA)

HSP 1 Score: 55.5 bits (132), Expect = 5.290e-7
Identity = 34/78 (43.59%), Postives = 46/78 (58.97%), Query Frame = 1
Query:   16 GSTPPENMLQNLPADAPRADVLLLGCGDARHALYSLWAHLSGLRGSGRWDGVGARALSFTLNDKEPAVLARVLLLLHM 249
            G++P  N++ +LP D   AD+LLLGCGDAR+ L++LW          + D    R   FT  D E AV+AR +LLL M
Sbjct:   17 GNSPAINLVDHLPPDLD-ADILLLGCGDARNILFTLWTESHDTVDKDK-DASKLRTFKFTCCDIEGAVIARNILLLAM 92          
BLAST of mRNA_C-tenellus_contig10957.2.1 vs. uniprot
Match: A0A8H7NTF1_9APHY (DUF4470 domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTF1_9APHY)

HSP 1 Score: 55.1 bits (131), Expect = 7.110e-7
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 1
Query:   16 GSTPPENMLQNLPADAPRADVLLLGCGDARHALYSLWAHLSGLRGSGRWDGVGARALSFTLNDKEPAVLARVLLLLHM 249
            G+T   ++L++ P DA  A +LLLGCGD R+ LYS++   +           GAR L FT  D EPAV+AR +LLL M
Sbjct:   17 GNTSAVDLLRDTPPDAD-AHLLLLGCGDPRNVLYSIYTDRN----------PGARVLDFTCCDIEPAVIARNILLLTM 83          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10957.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K075_9PHAE3.900e-1555.00DUF4470 domain-containing protein (Fragment) n=2 T... [more]
D8LNQ8_ECTSI7.850e-1355.13MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
D7FXN8_ECTSI1.780e-1150.63MYND-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A0C2X864_AMAMK5.930e-844.00MYND-type domain-containing protein n=1 Tax=Amanit... [more]
UPI0020081F7F8.100e-849.33uncharacterized protein n=1 Tax=Antrodia serialis ... [more]
A0A8H3HU61_9AGAM1.530e-741.03Hypothetical protein n=1 Tax=Rhizoctonia solani Ta... [more]
A0A8H6WD23_MYCCL2.060e-744.87MYND-type domain-containing protein n=1 Tax=Mycena... [more]
A0A5C3ND32_9AGAM2.830e-748.00MYND-type domain-containing protein n=1 Tax=Helioc... [more]
S8BX88_DACHA5.290e-743.59MYND-type zinc finger protein samB n=1 Tax=Dactyle... [more]
A0A8H7NTF1_9APHY7.110e-744.87DUF4470 domain-containing protein n=1 Tax=Postia p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10957contigC-tenellus_contig10957:5120..5371 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog160860.XP_007344765.1
PFAMsDUF4470,zf-MYND
Model size252
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.38e-08
EggNOG OGs2BWBX@1|root,2SE9H@2759|Eukaryota,39W4I@33154|Opisthokonta,3P092@4751|Fungi,3V4H9@5204|Basidiomycota,228UR@155619|Agaricomycetes,3H3AM@355688|Agaricomycetes incertae sedis
DescriptionDomain of unknown function (DUF4470)
Cds size252
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789156.4834754-CDS-C-tenellus_contig10957:5119..53711680789156.4834754-CDS-C-tenellus_contig10957:5119..5371Choristocarpus tenellus KU2346CDSC-tenellus_contig10957 5120..5371 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10957.2.1prot_C-tenellus_contig10957.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10957 5120..5371 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10957.2.1

>prot_C-tenellus_contig10957.2.1 ID=prot_C-tenellus_contig10957.2.1|Name=mRNA_C-tenellus_contig10957.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=84bp
MTCTKGSTPPENMLQNLPADAPRADVLLLGCGDARHALYSLWAHLSGLRG
SGRWDGVGARALSFTLNDKEPAVLARVLLLLHMF
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mRNA from alignment at C-tenellus_contig10957:5120..5371-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10957.2.1 ID=mRNA_C-tenellus_contig10957.2.1|Name=mRNA_C-tenellus_contig10957.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=252bp|location=Sequence derived from alignment at C-tenellus_contig10957:5120..5371- (Choristocarpus tenellus KU2346)
ATGACTTGCACAAAAGGAAGTACCCCCCCAGAGAATATGCTCCAGAACCT TCCGGCAGATGCCCCGCGGGCAGATGTTCTCCTTCTGGGCTGTGGGGATG CTCGCCACGCTCTCTACTCTCTATGGGCTCATCTTTCAGGCCTGAGGGGC TCAGGACGCTGGGATGGAGTTGGGGCCCGTGCTCTCAGCTTTACACTCAA TGATAAGGAGCCGGCGGTACTGGCACGGGTACTACTCCTTCTGCACATGT TT
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Coding sequence (CDS) from alignment at C-tenellus_contig10957:5120..5371-

>mRNA_C-tenellus_contig10957.2.1 ID=mRNA_C-tenellus_contig10957.2.1|Name=mRNA_C-tenellus_contig10957.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=252bp|location=Sequence derived from alignment at C-tenellus_contig10957:5120..5371- (Choristocarpus tenellus KU2346)
ATGACTTGCACAAAAGGAAGTACCCCCCCAGAGAATATGCTCCAGAACCT
TCCGGCAGATGCCCCGCGGGCAGATGTTCTCCTTCTGGGCTGTGGGGATG
CTCGCCACGCTCTCTACTCTCTATGGGCTCATCTTTCAGGCCTGAGGGGC
TCAGGACGCTGGGATGGAGTTGGGGCCCGTGCTCTCAGCTTTACACTCAA
TGATAAGGAGCCGGCGGTACTGGCACGGGTACTACTCCTTCTGCACATGT
TT
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