mRNA_C-tenellus_contig1083.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1083.3.1 vs. uniprot
Match: D7FJQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ0_ECTSI) HSP 1 Score: 75.1 bits (183), Expect = 1.150e-13 Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 25 SSELKFIYTVQRGDNASQLTADTGALVSNTY---SGGGSMFIDLLGRDVNTTLPIPG--SSNSLSGKSSFTVDTDAPYVIGLGSSLLGGEYGVGQ 294 S E+ F+YTV+ GD ++ ++ L + + GG + +DLLGR+ N TLP G S SLSG SS T++ P V+ +GSSL GGEYGVGQ Sbjct: 465 SDEITFVYTVELGDQSTDGVGNSAVLEAEGHYAVRGGDAPLVDLLGREANATLPGVGVWSDVSLSGASSLTIEATEPVVVAVGSSLDGGEYGVGQ 559
BLAST of mRNA_C-tenellus_contig1083.3.1 vs. uniprot
Match: A0A6H5L133_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L133_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 1.550e-13 Identity = 43/95 (45.26%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 25 SSELKFIYTVQRGDNASQLTADTGALVSNTY---SGGGSMFIDLLGRDVNTTLPIPG--SSNSLSGKSSFTVDTDAPYVIGLGSSLLGGEYGVGQ 294 S E+ F+YTV+ GD ++ ++ L + + GG + +DLLGR+ N TLP G S SLSG SS T++ P V+ +GSSL GGEYGVGQ Sbjct: 457 SDEITFVYTVELGDQSTDGVGNSVVLEAEGHYAVRGGDAPLVDLLGREANATLPGVGVWSDVSLSGASSLTIEATEPVVVAVGSSLRGGEYGVGQ 551
BLAST of mRNA_C-tenellus_contig1083.3.1 vs. uniprot
Match: A0A7Z9Q5T3_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7Z9Q5T3_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 1.340e-7 Identity = 33/81 (40.74%), Postives = 44/81 (54.32%), Query Frame = 1 Query: 52 VQRGDNASQLTADTGALVSNTYSGGGSMFIDLLGRDVNTTLPIPGSSNSLSGKSSFTVDTDAPYVIGLGSSLLGGEYGVGQ 294 V+ G N + L +GAL T I DVN TLP+PGS+NSL+GK + +DT AP V + S+ G YG G+ Sbjct: 1 VEAGQNIADLDNASGALSGGT--------IKSFNTDVNLTLPVPGSANSLAGKKNLVIDTTAPTVNSVSSTKTDGTYGPGE 73
BLAST of mRNA_C-tenellus_contig1083.3.1 vs. uniprot
Match: A0A2M9ZNR6_9LEPT (Uncharacterized protein n=1 Tax=Leptospira perolatii TaxID=2023191 RepID=A0A2M9ZNR6_9LEPT) HSP 1 Score: 57.8 bits (138), Expect = 1.400e-7 Identity = 33/87 (37.93%), Postives = 47/87 (54.02%), Query Frame = 1 Query: 34 LKFIYTVQRGDNASQLTADTGALVSNTYSGGGSMFIDLLGRDVNTTLPIPGSSNSLSGKSSFTVDTDAPYVIGLGSSLLGGEYGVGQ 294 L F YTV G++ + L + + +S G + G D++ TLP PG++ SL T+DT AP V +G+SL G YGVGQ Sbjct: 123 LSFSYTVSGGEDVADLDYSS----VSAFSLNGGSIKNSSGSDLSITLPTPGAAGSLGASKDLTIDTIAPSVFLVGTSLANGTYGVGQ 205
BLAST of mRNA_C-tenellus_contig1083.3.1 vs. uniprot
Match: A0A2E4WIC0_9BACT (Uncharacterized protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E4WIC0_9BACT) HSP 1 Score: 53.9 bits (128), Expect = 3.180e-6 Identity = 34/88 (38.64%), Postives = 46/88 (52.27%), Query Frame = 1 Query: 34 LKFIYTVQRGDNASQLT-ADTGALVSNTYSGGGSMFIDLLGRDVNTTLPIPGSSNSLSGKSSFTVDTDAPYVIGLGSSLLGGEYGVGQ 294 + F YTV+ G NA+ L A T +L N I D + LPIPG NSL+G+ + VDT+AP V + S+ G YG G+ Sbjct: 444 MTFHYTVEAGHNAAALDIASTTSLTGN---------IKNFNLDADLALPIPGDPNSLAGRKTLIVDTEAPVVNSVSSTKADGIYGPGE 522
BLAST of mRNA_C-tenellus_contig1083.3.1 vs. uniprot
Match: UPI001FB28EF6 (cell wall anchor protein n=1 Tax=Bdellovibrio sp. LBG001 TaxID=2835041 RepID=UPI001FB28EF6) HSP 1 Score: 53.5 bits (127), Expect = 4.340e-6 Identity = 33/84 (39.29%), Postives = 46/84 (54.76%), Query Frame = 1 Query: 25 SSELKFIYTVQRGDNASQLTADTGALVSNTYSGGGSMFIDLLGRDVNTTLPIPGSSNSLSGKSSFTVDTDAPYVIGLGSSLLGG 276 S+ L F YTVQ GDN+S L ++ +N+ S GS D G D+ TLP PG++ SL + +DT AP + S + GG Sbjct: 735 SNTLIFNYTVQAGDNSSDLDYES----ANSLSLNGSTIKDSFGNDMILTLPAPGATGSLGANKNIVIDTQAPDAFSI-SGVTGG 813
BLAST of mRNA_C-tenellus_contig1083.3.1 vs. uniprot
Match: A0A1C0VUR0_9CYAN (DUF4347 domain-containing protein n=1 Tax=Oscillatoriales cyanobacterium USR001 TaxID=1880991 RepID=A0A1C0VUR0_9CYAN) HSP 1 Score: 52.4 bits (124), Expect = 1.100e-5 Identity = 35/98 (35.71%), Postives = 47/98 (47.96%), Query Frame = 1 Query: 4 NSTSNTTSSELKFIYTVQRGDNASQLT-ADTGALVSNTYSGGGSMFIDLLGRDVNTTLPIPGSSNSLSGKSSFTVDTDAPYVIGLGSSLLGGEYGVGQ 294 N TS ++ L F YTV GD ++ L T AL N G D + TLP P ++NSL + +DT AP + + S+L G Y VGQ Sbjct: 949 NYTSGNGTNTLTFEYTVAAGDTSTDLDYLSTAALALN-----GGTIKDAATNNATLTLPAPAAANSLGANKALVIDTTAPTITSITSTLTDGTYSVGQ 1041
BLAST of mRNA_C-tenellus_contig1083.3.1 vs. uniprot
Match: A0A2U1X2L7_9PROT (Cadherin domain-containing protein (Fragment) n=2 Tax=Azospirillum TaxID=191 RepID=A0A2U1X2L7_9PROT) HSP 1 Score: 52.4 bits (124), Expect = 1.110e-5 Identity = 36/88 (40.91%), Postives = 45/88 (51.14%), Query Frame = 1 Query: 34 LKFIYTVQRGDNASQLT-ADTGALVSNTYSGGGSMFIDLLGRDVNTTLPIPGSSNSLSGKSSFTVDTDAPYVIGLGSSLLGGEYGVGQ 294 L F YTVQ GDNA+ L A TGAL N GG + D TL PG++NSL + +DT AP V + S + G Y G+ Sbjct: 2664 LSFTYTVQDGDNATDLDYASTGALTLN----GGGIADSSTSLDAILTLATPGAANSLGANKAIVIDTAAPTVSAV--SAVNGTYRAGE 2745
BLAST of mRNA_C-tenellus_contig1083.3.1 vs. uniprot
Match: A0A6B8QP83_9GAMM (Cadherin domain-containing protein n=1 Tax=Halomonas sp. PA16-9 TaxID=2576841 RepID=A0A6B8QP83_9GAMM) HSP 1 Score: 52.0 bits (123), Expect = 1.470e-5 Identity = 30/75 (40.00%), Postives = 39/75 (52.00%), Query Frame = 1 Query: 31 ELKFIYTVQRGDNASQLTADTGALVSNTYSGGGSMFIDLLGRDVNTTLPIPGSSNSLSGKSSFTVDTDAPYVIGL 255 EL F YTVQ GD +S L ++ N GGS+ D G D TLP PG++NSLS +D AP + + Sbjct: 178 ELTFAYTVQAGDESSDLALTNAGIILN----GGSIR-DAAGNDSELTLPTPGTANSLSANKDIVIDAVAPVITSV 247
BLAST of mRNA_C-tenellus_contig1083.3.1 vs. uniprot
Match: UPI001FE9A72C (DUF4347 domain-containing protein n=1 Tax=Microcoleus asticus TaxID=2815231 RepID=UPI001FE9A72C) HSP 1 Score: 52.0 bits (123), Expect = 1.490e-5 Identity = 33/87 (37.93%), Postives = 44/87 (50.57%), Query Frame = 1 Query: 34 LKFIYTVQRGDNASQLTADTGALVSNTYSGGGSMFIDLLGRDVNTTLPIPGSSNSLSGKSSFTVDTDAPYVIGLGSSLLGGEYGVGQ 294 L F Y V GD++ AD L + S GG + + D TLP PG++NSL + +DT AP V + S+L G Y VGQ Sbjct: 724 LTFRYAVAAGDSS----ADLDYLSTTALSLGGGIVKNAATADAILTLPTPGAANSLGANKAIVIDTLAPTVTSITSTLTDGTYTVGQ 806 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1083.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1083.3.1 >prot_C-tenellus_contig1083.3.1 ID=prot_C-tenellus_contig1083.3.1|Name=mRNA_C-tenellus_contig1083.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=98bp ANSTSNTTSSELKFIYTVQRGDNASQLTADTGALVSNTYSGGGSMFIDLLback to top mRNA from alignment at C-tenellus_contig1083:12894..13187- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1083.3.1 ID=mRNA_C-tenellus_contig1083.3.1|Name=mRNA_C-tenellus_contig1083.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=294bp|location=Sequence derived from alignment at C-tenellus_contig1083:12894..13187- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1083:12894..13187- >mRNA_C-tenellus_contig1083.3.1 ID=mRNA_C-tenellus_contig1083.3.1|Name=mRNA_C-tenellus_contig1083.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=294bp|location=Sequence derived from alignment at C-tenellus_contig1083:12894..13187- (Choristocarpus tenellus KU2346)back to top |