mRNA_C-tenellus_contig10795.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10795.1.2 vs. uniprot
Match: A0A6H5K4Q8_9PHAE (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4Q8_9PHAE) HSP 1 Score: 278 bits (710), Expect = 3.950e-86 Identity = 133/155 (85.81%), Postives = 146/155 (94.19%), Query Frame = 1 Query: 16 QVPKDIPWYRRSVSQMFMSGFLPFSAIYIELSYIFASVWGHQIYTLFGILILAFVLLIIVCSFITVALVYFQLAREDHRWWWRSFLSGGATGLFIYCYSFFYYFNRSNMDGMLQSSFYFGYMAIISYAFFIMLGFVGFMSSLTFVKHIYGVVKCD 480 QVPKD+PWYRR SQM MSGFLPFSAIYIEL YIFASVWGHQIYTLFGILILAF+LL++VCSFITV+L+YFQL REDHRWWWRSF SGG+TGLF+Y YSFFY+FNRS MDG+LQSSFYFGYMA+ISYAFFIMLGFVGF+SSLTFVKHIY V+KCD Sbjct: 36 QVPKDVPWYRRDASQMVMSGFLPFSAIYIELHYIFASVWGHQIYTLFGILILAFLLLLVVCSFITVSLIYFQLGREDHRWWWRSFFSGGSTGLFVYGYSFFYFFNRSQMDGLLQSSFYFGYMAVISYAFFIMLGFVGFVSSLTFVKHIYSVLKCD 190
BLAST of mRNA_C-tenellus_contig10795.1.2 vs. uniprot
Match: D8LTU6_ECTSI (Transmembrane 9 superfamily member n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTU6_ECTSI) HSP 1 Score: 279 bits (713), Expect = 1.500e-80 Identity = 133/155 (85.81%), Postives = 146/155 (94.19%), Query Frame = 1 Query: 16 QVPKDIPWYRRSVSQMFMSGFLPFSAIYIELSYIFASVWGHQIYTLFGILILAFVLLIIVCSFITVALVYFQLAREDHRWWWRSFLSGGATGLFIYCYSFFYYFNRSNMDGMLQSSFYFGYMAIISYAFFIMLGFVGFMSSLTFVKHIYGVVKCD 480 QVPKD+PWYRR SQM MSGFLPFSAIYIEL YIFASVWGHQIYTLFGILILAF+LL++VCSFITV+L+YFQL REDHRWWWRSF SGG+TGLF+Y YSFFY+FNRS MDG+LQSSFYFGYMA+ISYAFFIMLGFVGF+SSLTFVKHIY V+KCD Sbjct: 515 QVPKDVPWYRRDASQMVMSGFLPFSAIYIELHYIFASVWGHQIYTLFGILILAFLLLLVVCSFITVSLIYFQLGREDHRWWWRSFFSGGSTGLFVYAYSFFYFFNRSQMDGLLQSSFYFGYMAVISYAFFIMLGFVGFVSSLTFVKHIYSVLKCD 669
BLAST of mRNA_C-tenellus_contig10795.1.2 vs. uniprot
Match: A0A7S3K140_9STRA (Transmembrane 9 superfamily member n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K140_9STRA) HSP 1 Score: 249 bits (635), Expect = 4.650e-70 Identity = 119/155 (76.77%), Postives = 137/155 (88.39%), Query Frame = 1 Query: 16 QVPKDIPWYRRSVSQMFMSGFLPFSAIYIELSYIFASVWGHQIYTLFGILILAFVLLIIVCSFITVALVYFQLAREDHRWWWRSFLSGGATGLFIYCYSFFYYFNRSNMDGMLQSSFYFGYMAIISYAFFIMLGFVGFMSSLTFVKHIYGVVKCD 480 ++P D PWYR +QMFM+GFLPFSAIYIEL YIFASVWGH+IYTLFGIL LAF++L++V +FITV+LVYFQLARED+RWWWRS L GGATG FIY YSFFY+F+RSNMDG++Q SFYFGYMAIISYAFF+MLGFVGF +S TFV HIY VVK D Sbjct: 439 EIPDDAPWYRSPFAQMFMAGFLPFSAIYIELHYIFASVWGHKIYTLFGILFLAFIMLVVVTAFITVSLVYFQLAREDYRWWWRSLLCGGATGAFIYAYSFFYFFHRSNMDGLIQGSFYFGYMAIISYAFFLMLGFVGFSASATFVTHIYSVVKAD 593
BLAST of mRNA_C-tenellus_contig10795.1.2 vs. uniprot
Match: F0YRK7_AURAN (Transmembrane 9 superfamily member n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YRK7_AURAN) HSP 1 Score: 242 bits (618), Expect = 6.020e-70 Identity = 117/155 (75.48%), Postives = 137/155 (88.39%), Query Frame = 1 Query: 16 QVPKDIPWYRRSVSQMFMSGFLPFSAIYIELSYIFASVWGHQIYTLFGILILAFVLLIIVCSFITVALVYFQLAREDHRWWWRSFLSGGATGLFIYCYSFFYYFNRSNMDGMLQSSFYFGYMAIISYAFFIMLGFVGFMSSLTFVKHIYGVVKCD 480 ++P ++PWYR +QMFM+GFLPFSAIYIEL YIFAS+WGH+IYTLFGIL LAFV+L+IV +FITV+LVYFQLARED+RWWWRS L GG+TG FIY YSFFY+FNRS+MDGM+Q SFYFGYMA+ISYAFF+MLG VGF S+L FV HIY VVK D Sbjct: 228 EIPPEMPWYRLPPAQMFMAGFLPFSAIYIELHYIFASLWGHKIYTLFGILFLAFVMLVIVTAFITVSLVYFQLAREDYRWWWRSLLCGGSTGAFIYAYSFFYFFNRSSMDGMIQGSFYFGYMAVISYAFFLMLGSVGFHSTLAFVCHIYSVVKAD 382
BLAST of mRNA_C-tenellus_contig10795.1.2 vs. uniprot
Match: A0A482SWT9_9ARCH (Transmembrane 9 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWT9_9ARCH) HSP 1 Score: 233 bits (593), Expect = 7.590e-69 Identity = 111/159 (69.81%), Postives = 139/159 (87.42%), Query Frame = 1 Query: 16 QVPKDIP----WYRRSVSQMFMSGFLPFSAIYIELSYIFASVWGHQIYTLFGILILAFVLLIIVCSFITVALVYFQLAREDHRWWWRSFLSGGATGLFIYCYSFFYYFNRSNMDGMLQSSFYFGYMAIISYAFFIMLGFVGFMSSLTFVKHIYGVVKCD 480 +VP+++P WY+ V+Q+F++GFLPFSAIYIEL YIFAS+WGH+IY+LFGIL LAFV+L IV SFIT+AL+YFQLAREDHRWWW + ++GGATGLF++ YSF+Y+F+RSNMDG+LQ SFYFGYMA++SYAFFIMLGFVGF S+ FV +IYG VK D Sbjct: 36 KVPREVPVYNTWYKHPVAQIFIAGFLPFSAIYIELHYIFASLWGHKIYSLFGILFLAFVMLTIVTSFITIALLYFQLAREDHRWWWSALINGGATGLFVFGYSFYYFFHRSNMDGLLQLSFYFGYMAVVSYAFFIMLGFVGFYSAFEFVNYIYGAVKTD 194
BLAST of mRNA_C-tenellus_contig10795.1.2 vs. uniprot
Match: A0A812UHL6_SYMMI (Transmembrane 9 superfamily member n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UHL6_SYMMI) HSP 1 Score: 238 bits (606), Expect = 4.180e-68 Identity = 112/155 (72.26%), Postives = 136/155 (87.74%), Query Frame = 1 Query: 16 QVPKDIPWYRRSVSQMFMSGFLPFSAIYIELSYIFASVWGHQIYTLFGILILAFVLLIIVCSFITVALVYFQLAREDHRWWWRSFLSGGATGLFIYCYSFFYYFNRSNMDGMLQSSFYFGYMAIISYAFFIMLGFVGFMSSLTFVKHIYGVVKCD 480 +VPK++ WYR + Q+F++GFLPFS+IYIEL YIFAS+WGH+IYTLFGIL LAFV+L V SFIT+AL+YFQL REDHRWWWRSF +GGATGL I+ YSFFY+F+RS+MDG+LQ SFYFGYM ++SYAFF+MLGFVGFMSS +FV +IYG VK D Sbjct: 236 EVPKNVNWYRHPLVQLFIAGFLPFSSIYIELHYIFASMWGHKIYTLFGILFLAFVMLATVASFITIALLYFQLVREDHRWWWRSFANGGATGLLIFAYSFFYFFHRSSMDGVLQGSFYFGYMGVVSYAFFMMLGFVGFMSSFSFVNYIYGAVKSD 390
BLAST of mRNA_C-tenellus_contig10795.1.2 vs. uniprot
Match: A0A7S0ALP7_9STRA (Transmembrane 9 superfamily member n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ALP7_9STRA) HSP 1 Score: 230 bits (587), Expect = 4.240e-68 Identity = 108/155 (69.68%), Postives = 131/155 (84.52%), Query Frame = 1 Query: 16 QVPKDIPWYRRSVSQMFMSGFLPFSAIYIELSYIFASVWGHQIYTLFGILILAFVLLIIVCSFITVALVYFQLAREDHRWWWRSFLSGGATGLFIYCYSFFYYFNRSNMDGMLQSSFYFGYMAIISYAFFIMLGFVGFMSSLTFVKHIYGVVKCD 480 ++P ++PWYR QM ++GFLPFSAIYIEL YIFAS+WGHQIYTLFGIL+ AF+LL+IV SFITVAL+YFQLAREDH+WWW +F++GG TG+FIY YS FYY++RS M G+LQSSFYFGYMA +S+ FF+MLG F SL FVKHIYG +KCD Sbjct: 31 EIPTEVPWYRGKPFQMVIAGFLPFSAIYIELHYIFASMWGHQIYTLFGILLFAFILLVIVSSFITVALLYFQLAREDHQWWWATFVNGGMTGVFIYVYSIFYYYHRSGMSGLLQSSFYFGYMAAVSFGFFLMLGSAAFYMSLAFVKHIYGRIKCD 185
BLAST of mRNA_C-tenellus_contig10795.1.2 vs. uniprot
Match: F0YMM4_AURAN (Transmembrane 9 superfamily member n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMM4_AURAN) HSP 1 Score: 240 bits (613), Expect = 6.260e-67 Identity = 119/159 (74.84%), Postives = 139/159 (87.42%), Query Frame = 1 Query: 16 QVPKDIPWYRRSVSQM----FMSGFLPFSAIYIELSYIFASVWGHQIYTLFGILILAFVLLIIVCSFITVALVYFQLAREDHRWWWRSFLSGGATGLFIYCYSFFYYFNRSNMDGMLQSSFYFGYMAIISYAFFIMLGFVGFMSSLTFVKHIYGVVKCD 480 ++P ++PWYR +QM FM+GFLPFSAIYIEL YIFAS+WGH+IYTLFGIL LAFV+LIIV +FITV+LVYFQLARED+RWWWRS L GG+TG+FIY YSFFY+FNRS+MDGM+Q SFYFGYMAIISYAFF+MLGF+GF S+L FV HIY VVK D Sbjct: 433 EIPAEMPWYRLPPAQMPCTEFMAGFLPFSAIYIELHYIFASLWGHKIYTLFGILYLAFVMLIIVTAFITVSLVYFQLAREDYRWWWRSLLCGGSTGVFIYAYSFFYFFNRSSMDGMIQGSFYFGYMAIISYAFFLMLGFIGFHSTLAFVCHIYSVVKAD 591
BLAST of mRNA_C-tenellus_contig10795.1.2 vs. uniprot
Match: A0A7S1ZKK0_TRICV (Transmembrane 9 superfamily member n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZKK0_TRICV) HSP 1 Score: 226 bits (576), Expect = 2.920e-65 Identity = 108/155 (69.68%), Postives = 128/155 (82.58%), Query Frame = 1 Query: 16 QVPKDIPWYRRSVSQMFMSGFLPFSAIYIELSYIFASVWGHQIYTLFGILILAFVLLIIVCSFITVALVYFQLAREDHRWWWRSFLSGGATGLFIYCYSFFYYFNRSNMDGMLQSSFYFGYMAIISYAFFIMLGFVGFMSSLTFVKHIYGVVKCD 480 ++P ++ WYR QM ++GFLPFSAIYIEL YIFAS+WGHQIYTLFGIL+ AFVLL+IVCSFITVAL+YFQLAREDH WWW SF++GG TG+FIY YSFFYYF+RS M G LQ SFYFGYMA +S+ FF+MLG F L FV++IYG +KCD Sbjct: 119 EIPTEVAWYRTHPFQMLIAGFLPFSAIYIELHYIFASMWGHQIYTLFGILLFAFVLLVIVCSFITVALLYFQLAREDHGWWWISFVNGGMTGIFIYAYSFFYYFHRSGMTGWLQGSFYFGYMAAVSFGFFLMLGSAAFHFCLAFVRYIYGRIKCD 273
BLAST of mRNA_C-tenellus_contig10795.1.2 vs. uniprot
Match: A0A7S2M7Q6_9STRA (Transmembrane 9 superfamily member n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M7Q6_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.360e-64 Identity = 114/155 (73.55%), Postives = 132/155 (85.16%), Query Frame = 1 Query: 16 QVPKDIPWYRRSVSQMFMSGFLPFSAIYIELSYIFASVWGHQIYTLFGILILAFVLLIIVCSFITVALVYFQLAREDHRWWWRSFLSGGATGLFIYCYSFFYYFNRSNMDGMLQSSFYFGYMAIISYAFFIMLGFVGFMSSLTFVKHIYGVVKCD 480 ++P ++PWYR QM +SGFLPFSAIYIEL YIFAS+WGHQIYTLFGIL+ AFVLL+IV SFI+VAL+YFQLAREDHRWWW +F++ G TGLFIY YSFFYYF+RS M GMLQSSFYFGYM+I+S+ FF+MLG GF SL FVKHIY VKCD Sbjct: 492 EIPTEVPWYRSRFVQMVVSGFLPFSAIYIELHYIFASMWGHQIYTLFGILLFAFVLLLIVTSFISVALLYFQLAREDHRWWWSTFINSGMTGLFIYAYSFFYYFHRSGMTGMLQSSFYFGYMSIVSFGFFLMLGSCGFHFSLLFVKHIYSRVKCD 646 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10795.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10795.1.2 >prot_C-tenellus_contig10795.1.2 ID=prot_C-tenellus_contig10795.1.2|Name=mRNA_C-tenellus_contig10795.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=141bp MFMSGFLPFSAIYIELSYIFASVWGHQIYTLFGILILAFVLLIIVCSFITback to top mRNA from alignment at C-tenellus_contig10795:8..4173+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10795.1.2 ID=mRNA_C-tenellus_contig10795.1.2|Name=mRNA_C-tenellus_contig10795.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4166bp|location=Sequence derived from alignment at C-tenellus_contig10795:8..4173+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10795:8..4173+ >mRNA_C-tenellus_contig10795.1.2 ID=mRNA_C-tenellus_contig10795.1.2|Name=mRNA_C-tenellus_contig10795.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=423bp|location=Sequence derived from alignment at C-tenellus_contig10795:8..4173+ (Choristocarpus tenellus KU2346)back to top |