mRNA_C-tenellus_contig1079.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1079.3.1 vs. uniprot
Match: D7FWP4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP4_ECTSI) HSP 1 Score: 199 bits (505), Expect = 1.160e-55 Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 2 Query: 257 KMVNVPKERRTYCKAKGCSKHTVHKVTQYKAGKASNFAQGKRRYDHKQMGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKQATGHQY 571 +MVNVPKERRTYCK K C+KHTVHKVTQYK+GKASNFAQGKRRYDHKQ GFGGQTKPIFHKKAKTTKKVTLRLECK CKAKKQLVI RCKHFELGEKKQATGHQY Sbjct: 34 EMVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 138
BLAST of mRNA_C-tenellus_contig1079.3.1 vs. uniprot
Match: F0YGF9_AURAN (RL44_PICJA 60S ribosomal protein L44 n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YGF9_AURAN) HSP 1 Score: 195 bits (495), Expect = 9.010e-55 Identity = 94/104 (90.38%), Postives = 97/104 (93.27%), Query Frame = 2 Query: 260 MVNVPKERRTYCKAKGCSKHTVHKVTQYKAGKASNFAQGKRRYDHKQMGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKQATGHQY 571 MVNVPKER+TYCKAK C KHT HKVTQYKAGKASNFAQGKRRYD KQMGFGGQTKP+FHKKAKTTKKVTLRLECKECKAKKQL IKRCKHFELGEKK+ TGH Y Sbjct: 1 MVNVPKERKTYCKAKKCRKHTTHKVTQYKAGKASNFAQGKRRYDMKQMGFGGQTKPVFHKKAKTTKKVTLRLECKECKAKKQLTIKRCKHFELGEKKKTTGHTY 104
BLAST of mRNA_C-tenellus_contig1079.3.1 vs. uniprot
Match: A0A835YP36_9STRA (Zinc-binding ribosomal protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP36_9STRA) HSP 1 Score: 194 bits (493), Expect = 1.690e-54 Identity = 94/104 (90.38%), Postives = 99/104 (95.19%), Query Frame = 2 Query: 260 MVNVPKERRTYCKAKGCSKHTVHKVTQYKAGKASNFAQGKRRYDHKQMGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKQATGHQY 571 MVNVPKERRTYCK+K C KHTVHKV+QYK+GKASNFAQGKRRYD KQ G+GGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKK+ATGH Y Sbjct: 1 MVNVPKERRTYCKSKKCGKHTVHKVSQYKSGKASNFAQGKRRYDSKQKGYGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKKATGHVY 104
BLAST of mRNA_C-tenellus_contig1079.3.1 vs. uniprot
Match: A0A7S2UXA0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXA0_9STRA) HSP 1 Score: 192 bits (488), Expect = 8.150e-54 Identity = 92/104 (88.46%), Postives = 98/104 (94.23%), Query Frame = 2 Query: 260 MVNVPKERRTYCKAKGCSKHTVHKVTQYKAGKASNFAQGKRRYDHKQMGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKQATGHQY 571 MVNVPKERRTYCKAK C+KHT+HKVTQYKAGKASNFAQGKRRYDHKQ G+GGQTKPIFHKKAKTTKK+ LRLECKECK KKQLVIKR KHFELGEKK++TG QY Sbjct: 1 MVNVPKERRTYCKAKNCNKHTIHKVTQYKAGKASNFAQGKRRYDHKQKGYGGQTKPIFHKKAKTTKKIVLRLECKECKTKKQLVIKRTKHFELGEKKKSTGPQY 104
BLAST of mRNA_C-tenellus_contig1079.3.1 vs. uniprot
Match: A0A7R9UFU1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFU1_9STRA) HSP 1 Score: 184 bits (468), Expect = 4.340e-51 Identity = 85/104 (81.73%), Postives = 96/104 (92.31%), Query Frame = 2 Query: 260 MVNVPKERRTYCKAKGCSKHTVHKVTQYKAGKASNFAQGKRRYDHKQMGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKQATGHQY 571 MVNVPKERRTYCK+ C +H +HKVTQYK+GKASNFAQGKRRYDHKQMG+GGQTKPIFHKKAKTTKK+TLRLECK+CK+K LV+KRCKHFE+GEKK+ GHQY Sbjct: 1 MVNVPKERRTYCKSPICRRHELHKVTQYKSGKASNFAQGKRRYDHKQMGYGGQTKPIFHKKAKTTKKITLRLECKKCKSKSHLVVKRCKHFEIGEKKKTAGHQY 104
BLAST of mRNA_C-tenellus_contig1079.3.1 vs. uniprot
Match: W7TXG3_9STRA (60s ribosomal protein l44 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXG3_9STRA) HSP 1 Score: 184 bits (468), Expect = 4.340e-51 Identity = 89/104 (85.58%), Postives = 95/104 (91.35%), Query Frame = 2 Query: 260 MVNVPKERRTYCKAKGCSKHTVHKVTQYKAGKASNFAQGKRRYDHKQMGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKQATGHQY 571 MV +PKER+T+CK K C KHTVHKVTQYKAGKASN+AQGKRRYD KQ G+GGQTKPI HKKAKTTKKVTLRLECKECK KKQLVIKR KHFELGEKK+ATGHQY Sbjct: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKECKTKKQLVIKRTKHFELGEKKKATGHQY 104
BLAST of mRNA_C-tenellus_contig1079.3.1 vs. uniprot
Match: A0A7S3NIT2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIT2_9STRA) HSP 1 Score: 184 bits (466), Expect = 7.870e-51 Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 2 Query: 260 MVNVPKERRTYCKAKGCSKHTVHKVTQYKAGKASNFAQGKRRYDHKQMGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKQAT 559 MVNVPKERRTYCK K C KHTVHKVTQYKAGKASNFAQGKRRYD KQ G+GGQTKPIFHKKAKTTKKV LRLECKECKAKKQL IKRCKHFELGEKK++T Sbjct: 1 MVNVPKERRTYCKGKKCKKHTVHKVTQYKAGKASNFAQGKRRYDAKQQGYGGQTKPIFHKKAKTTKKVVLRLECKECKAKKQLCIKRCKHFELGEKKKST 100
BLAST of mRNA_C-tenellus_contig1079.3.1 vs. uniprot
Match: A0A7S1TR78_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TR78_9STRA) HSP 1 Score: 184 bits (467), Expect = 8.170e-51 Identity = 86/105 (81.90%), Postives = 96/105 (91.43%), Query Frame = 2 Query: 257 KMVNVPKERRTYCKAKGCSKHTVHKVTQYKAGKASNFAQGKRRYDHKQMGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKQATGHQY 571 KMVNVPKERR+YCK K C H VHKVTQYK+GKASNFAQGKRRYD+KQMG+GGQTKPIFHKKAKTTKK+TLRLECK+CK K LV+KRCKHFE+GEKK+ +GHQY Sbjct: 10 KMVNVPKERRSYCKNKKCKNHQVHKVTQYKSGKASNFAQGKRRYDNKQMGYGGQTKPIFHKKAKTTKKITLRLECKKCKTKTHLVVKRCKHFEIGEKKKPSGHQY 114
BLAST of mRNA_C-tenellus_contig1079.3.1 vs. uniprot
Match: A0A812MGG9_SYMMI (RIM-C protein n=3 Tax=cellular organisms TaxID=131567 RepID=A0A812MGG9_SYMMI) HSP 1 Score: 182 bits (462), Expect = 2.670e-50 Identity = 86/102 (84.31%), Postives = 95/102 (93.14%), Query Frame = 2 Query: 260 MVNVPKERRTYCKAKGCSKHTVHKVTQYKAGKASNFAQGKRRYDHKQMGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKQATGH 565 MVNVPKER+T+CK K C KHT+HKVTQYK+GKASNFAQGKRRYDHKQMGFGGQTKP+FHKKAKTTKK+TLRLECKECKAKKQL IKR KHFELGEKK+ + + Sbjct: 1 MVNVPKERKTFCKGKKCGKHTLHKVTQYKSGKASNFAQGKRRYDHKQMGFGGQTKPVFHKKAKTTKKITLRLECKECKAKKQLCIKRTKHFELGEKKKVSAY 102
BLAST of mRNA_C-tenellus_contig1079.3.1 vs. uniprot
Match: I6ZGD0_9STRA (Ribosomal protein L44 n=1 Tax=Aurantiochytrium sp. KRS101 TaxID=797128 RepID=I6ZGD0_9STRA) HSP 1 Score: 182 bits (462), Expect = 2.840e-50 Identity = 88/104 (84.62%), Postives = 94/104 (90.38%), Query Frame = 2 Query: 260 MVNVPKERRTYCKAKGCSKHTVHKVTQYKAGKASNFAQGKRRYDHKQMGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKQATGHQY 571 MVNVPKERRT+CK K C KHTVHKVTQYKAGKASNFAQGKRRYD KQ G+GGQTKPIFHKKAKTTKKVTLRLECKECK K Q+ +KRCK FELG+KK+A GHQY Sbjct: 1 MVNVPKERRTFCKGKQCRKHTVHKVTQYKAGKASNFAQGKRRYDRKQKGYGGQTKPIFHKKAKTTKKVTLRLECKECKTKCQIGLKRCKTFELGQKKEAAGHQY 104 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1079.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1079.3.1 >prot_C-tenellus_contig1079.3.1 ID=prot_C-tenellus_contig1079.3.1|Name=mRNA_C-tenellus_contig1079.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=111bp MFICGKMVNVPKERRTYCKAKGCSKHTVHKVTQYKAGKASNFAQGKRRYDback to top mRNA from alignment at C-tenellus_contig1079:4324..9593+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1079.3.1 ID=mRNA_C-tenellus_contig1079.3.1|Name=mRNA_C-tenellus_contig1079.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=5270bp|location=Sequence derived from alignment at C-tenellus_contig1079:4324..9593+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1079:4324..9593+ >mRNA_C-tenellus_contig1079.3.1 ID=mRNA_C-tenellus_contig1079.3.1|Name=mRNA_C-tenellus_contig1079.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=333bp|location=Sequence derived from alignment at C-tenellus_contig1079:4324..9593+ (Choristocarpus tenellus KU2346)back to top |