mRNA_C-tenellus_contig10600.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10600.2.1 vs. uniprot
Match: D7FQ06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ06_ECTSI) HSP 1 Score: 322 bits (826), Expect = 1.630e-108 Identity = 167/232 (71.98%), Postives = 191/232 (82.33%), Query Frame = 1 Query: 4 TRSRLPSRDVHVLAREHDTSVPSYRRQFFTYSAMGPEKGLVP--STTRVAQRLNPGVKAFFRRTFLPNGYPDSVRKEYMEYQMWDTVQALCSYLRGVLSTAAMLHASGVGDEKASAMAVALVWVLRDGFGMVGSLLFSYAASNHMDSNIKEWRLFADVINDIGLTLDLLAPVFRSRFALVSSLATMCKALCGVAAGCTKTSITAHFSLQANIADISAKENAQETAVTLCGMV 693 TRS + S V+A E D+S P RR +Y +G ++GLVP S RV +R P + AF RRTFLP GYP SVRKEYMEYQ WDTVQALCSYLRGVL AMLHASGVGDE ASA+A A+VWVLRDGFGM+GSLLFSYAAS+HMDSNIKEWRLFAD+ ND+GLTLDL+APVFR FA+VSSLAT+ KALCGVAAGCTKTSIT+HF+L+ N+ADISAKENAQETAV +CGM+ Sbjct: 8 TRSGVLSAPPQVVAVEFDSSRPDSRRPVVSYRVLGQDEGLVPQNSWNRV-KRFQPSMSAFVRRTFLPTGYPSSVRKEYMEYQTWDTVQALCSYLRGVLCLTAMLHASGVGDENASAIAAAMVWVLRDGFGMIGSLLFSYAASSHMDSNIKEWRLFADIANDVGLTLDLVAPVFRGNFAVVSSLATVFKALCGVAAGCTKTSITSHFALKQNMADISAKENAQETAVNVCGML 238
BLAST of mRNA_C-tenellus_contig10600.2.1 vs. uniprot
Match: A0A7S2CTD9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTD9_9STRA) HSP 1 Score: 225 bits (573), Expect = 5.550e-71 Identity = 112/169 (66.27%), Postives = 136/169 (80.47%), Query Frame = 1 Query: 190 FLPNGYPDSVRKEYMEYQMWDTVQALCSYLRGVLSTAAMLHASGVGDEKASAMAVALVWVLRDGFGMVGSLLFSYAASNHMDSNIKEWRLFADVINDIGLTLDLLAP-VFRSRFALVSSLATMCKALCGVAAGCTKTSITAHFSLQANIADISAKENAQETAVTLCGMV 693 FLP G+P SVR EY+ YQ+WDTVQALCSYLRG+ ST A+L + GVGD ASAM+ A+ W+LRDG GMVGSLL SY A + D+++KEWRLFADVIND+GLTLD+LAP R F LV L T+CKA+CGV+AG TK+SITAH +L N AD++AKENAQET VTLCG++ Sbjct: 17 FLPVGFPGSVRPEYLTYQIWDTVQALCSYLRGIFSTRAVLVSVGVGDSNASAMSAAVTWILRDGAGMVGSLLLSYGAGSSFDAHLKEWRLFADVINDVGLTLDMLAPHTPRRYFGLVLGLGTVCKAMCGVSAGATKSSITAHMALTGNTADVAAKENAQETFVTLCGIL 185
BLAST of mRNA_C-tenellus_contig10600.2.1 vs. uniprot
Match: A0A7R9UTE8_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UTE8_DIALT) HSP 1 Score: 224 bits (570), Expect = 7.030e-70 Identity = 105/185 (56.76%), Postives = 143/185 (77.30%), Query Frame = 1 Query: 139 RVAQRLNPGVKAFFRRTFLPNGYPDSVRKEYMEYQMWDTVQALCSYLRGVLSTAAMLHASGVGDEKASAMAVALVWVLRDGFGMVGSLLFSYAASNHMDSNIKEWRLFADVINDIGLTLDLLAPVFRSRFALVSSLATMCKALCGVAAGCTKTSITAHFSLQANIADISAKENAQETAVTLCGMV 693 R++ + + F R FLP+G+P SVR EY YQ++DT+QALCSYLRG+L+T A+L ASGVG+E AS +A A+ WVLRDGFGM+GSL+F++ + D +KEWRLFAD+IND+GL+LD++AP+ R L++S MCK +CGVAAG T+ SITAHF+L+ N+AD+S KE AQETAV+L G++ Sbjct: 39 RISASARERLWSLFARVFLPDGFPHSVRPEYATYQLYDTLQALCSYLRGILTTTAILEASGVGNETASPLAAAVAWVLRDGFGMLGSLIFAFCVGSRFDGGVKEWRLFADLINDVGLSLDMVAPLLPHRVLLLTSCGAMCKTMCGVAAGATRASITAHFALRDNLADVSTKEGAQETAVSLVGLL 223
BLAST of mRNA_C-tenellus_contig10600.2.1 vs. uniprot
Match: W7U4R7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4R7_9STRA) HSP 1 Score: 229 bits (583), Expect = 8.110e-69 Identity = 115/171 (67.25%), Postives = 138/171 (80.70%), Query Frame = 1 Query: 187 TFLPNGYPDSVRKEYMEYQMWDTVQALCSYLRGVLSTAAMLHASGVGDEKASAMAVALVWVLRDGFGMVGSLLFSYAASNHMDSNIKEWRLFADVINDIGLTLDLLA--PVFRSRFALVSSLATMCKALCGVAAGCTKTSITAHFSLQANIADISAKENAQETAVTLCGMV 693 TFLP GYP SVR+EY+ YQ+WDTVQALCSYLRG+L+T A+L SGVG E ASA++ A+ WV RDG GM SLLFS AS D N+KEWRLFAD+ ND+GLTLD+L P + F L++ L+T+CK +CGVAAGCTK+SITAHFSL+ NIAD+SAKENAQETAVTL G+V Sbjct: 62 TFLPVGYPYSVREEYLTYQIWDTVQALCSYLRGILTTKAILEGSGVGSEAASALSAAMNWVFRDGVGMACSLLFSSMASISFDCNVKEWRLFADISNDVGLTLDMLTGLPSLKGHFLLLTCLSTVCKTMCGVAAGCTKSSITAHFSLRGNIADVSAKENAQETAVTLFGIV 232
BLAST of mRNA_C-tenellus_contig10600.2.1 vs. uniprot
Match: A0A7S2TJN0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJN0_9EUKA) HSP 1 Score: 213 bits (543), Expect = 5.520e-67 Identity = 104/182 (57.14%), Postives = 134/182 (73.63%), Query Frame = 1 Query: 148 QRLNPGVKAFFRRTFLPNGYPDSVRKEYMEYQMWDTVQALCSYLRGVLSTAAMLHASGVGDEKASAMAVALVWVLRDGFGMVGSLLFSYAASNHMDSNIKEWRLFADVINDIGLTLDLLAPVFRSRFALVSSLATMCKALCGVAAGCTKTSITAHFSLQANIADISAKENAQETAVTLCGMV 693 +R+ + FR FLP GYP SV EY+EYQ WDTVQALCSYLRGVL+ A GVG+ +A+A A L WV++DGFGMVGSLLF+ + D+N+K WRLFAD+IN++GL LD++AP+ + F LV AT+CKA+CGVAAG TK ++TAHF+L N AD+ AKE++QE AVTL G+V Sbjct: 2 RRIRRKITDVFRSVFLPIGYPSSVATEYLEYQAWDTVQALCSYLRGVLAAKAWFEGVGVGNTEATAAAATLQWVMKDGFGMVGSLLFASLCGPYFDTNVKSWRLFADLINNVGLFLDMIAPLTQEYFLLVVCFATICKAMCGVAAGATKAALTAHFALNGNNADVQAKESSQELAVTLMGLV 183
BLAST of mRNA_C-tenellus_contig10600.2.1 vs. uniprot
Match: R1DHG9_EMIHU (Uncharacterized protein (Fragment) n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DHG9_EMIHU) HSP 1 Score: 215 bits (548), Expect = 2.030e-66 Identity = 107/189 (56.61%), Postives = 137/189 (72.49%), Query Frame = 1 Query: 127 PSTTRVAQRLNPGVKAFFRRTFLPNGYPDSVRKEYMEYQMWDTVQALCSYLRGVLSTAAMLHASGVGDEKASAMAVALVWVLRDGFGMVGSLLFSYAASNHMDSNIKEWRLFADVINDIGLTLDLLAPVFRSRFALVSSLATMCKALCGVAAGCTKTSITAHFSLQANIADISAKENAQETAVTLCGMV 693 P+ +A V R LP GYP SVR EY+ +Q++DT+QA CSYLR +LST A+L ASGVG+ AS MA A+ WVLRDGFGM GSLLF+ D N+KEWRLFAD+IND+GLTL++LAP+ RF LV++L + C ++CG+ AG T+ SITAHF+L N+AD+SAKE AQETAVTL G++ Sbjct: 38 PAAESIAGSTAASVFEAARAALLPEGYPGSVRPEYIRFQVYDTIQAACSYLRAILSTGAILKASGVGEAAASPMAAAVAWVLRDGFGMCGSLLFASLVGVGFDENVKEWRLFADLINDVGLTLNMLAPMAGERFFLVAALGSTCTSICGMVAGATRASITAHFALSGNLADVSAKEGAQETAVTLVGLL 226
BLAST of mRNA_C-tenellus_contig10600.2.1 vs. uniprot
Match: A0A7S3WC01_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WC01_EMIHU) HSP 1 Score: 216 bits (549), Expect = 8.610e-65 Identity = 107/189 (56.61%), Postives = 137/189 (72.49%), Query Frame = 1 Query: 127 PSTTRVAQRLNPGVKAFFRRTFLPNGYPDSVRKEYMEYQMWDTVQALCSYLRGVLSTAAMLHASGVGDEKASAMAVALVWVLRDGFGMVGSLLFSYAASNHMDSNIKEWRLFADVINDIGLTLDLLAPVFRSRFALVSSLATMCKALCGVAAGCTKTSITAHFSLQANIADISAKENAQETAVTLCGMV 693 P+ +A V R LP GYP SVR EY+ +Q++DT+QA CSYLR +LST A+L ASGVG+ AS MA A+ WVLRDGFGM GSLLF+ D N+KEWRLFAD+IND+GLTL++LAP+ RF LV++L + C ++CG+ AG T+ SITAHF+L N+AD+SAKE AQETAVTL G++ Sbjct: 20 PAAESIAGSTAASVFEAARAALLPEGYPGSVRPEYLRFQVYDTIQAACSYLRAILSTGAILKASGVGEAAASPMAAAVAWVLRDGFGMCGSLLFASLVGVGFDENVKEWRLFADLINDVGLTLNMLAPMAGERFFLVAALGSTCTSICGMVAGATRASITAHFALSGNLADVSAKEGAQETAVTLVGLL 208
BLAST of mRNA_C-tenellus_contig10600.2.1 vs. uniprot
Match: A0A7S3WBE0_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WBE0_EMIHU) HSP 1 Score: 216 bits (549), Expect = 1.500e-64 Identity = 107/189 (56.61%), Postives = 137/189 (72.49%), Query Frame = 1 Query: 127 PSTTRVAQRLNPGVKAFFRRTFLPNGYPDSVRKEYMEYQMWDTVQALCSYLRGVLSTAAMLHASGVGDEKASAMAVALVWVLRDGFGMVGSLLFSYAASNHMDSNIKEWRLFADVINDIGLTLDLLAPVFRSRFALVSSLATMCKALCGVAAGCTKTSITAHFSLQANIADISAKENAQETAVTLCGMV 693 P+ +A V R LP GYP SVR EY+ +Q++DT+QA CSYLR +LST A+L ASGVG+ AS MA A+ WVLRDGFGM GSLLF+ D N+KEWRLFAD+IND+GLTL++LAP+ RF LV++L + C ++CG+ AG T+ SITAHF+L N+AD+SAKE AQETAVTL G++ Sbjct: 20 PAAESIAGSTAASVFEAARAALLPEGYPGSVRPEYLRFQVYDTIQAACSYLRAILSTGAILKASGVGEAAASPMAAAVAWVLRDGFGMCGSLLFASLVGVGFDENVKEWRLFADLINDVGLTLNMLAPMAGERFFLVAALGSTCTSICGMVAGATRASITAHFALSGNLADVSAKEGAQETAVTLVGLL 208
BLAST of mRNA_C-tenellus_contig10600.2.1 vs. uniprot
Match: A0A7S2WUK5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUK5_9STRA) HSP 1 Score: 212 bits (539), Expect = 3.910e-63 Identity = 108/169 (63.91%), Postives = 133/169 (78.70%), Query Frame = 1 Query: 190 FLPNGYPDSVRKEYMEYQMWDTVQALCSYLRGVLSTAAMLHASGVGDEKASAMAVALVWVLRDGFGMVGSLLFSYAASNHMDSNIKEWRLFADVINDIGLTLDLLAPVFRSRFAL-VSSLATMCKALCGVAAGCTKTSITAHFSLQANIADISAKENAQETAVTLCGMV 693 FLP G+P SVR EY+EYQ WDTVQAL SYLRG+ ST A+L + GVG+E ASA+A A+ WVLRDG GM+GSL F Y DS +KEWRLFAD+IND+GL LD+L+P + L V+SLAT+CKA+CGVAAG TK SITAH +L+ N AD++AKE+AQETAVTL G++ Sbjct: 16 FLPVGFPASVRPEYLEYQFWDTVQALTSYLRGIFSTRAVLVSVGVGNESASALAAAITWVLRDGAGMLGSLFFGYWCGGSFDSFLKEWRLFADLINDVGLLLDMLSPHLAADLVLPVASLATVCKAMCGVAAGSTKASITAHMALRGNNADVAAKESAQETAVTLVGII 184
BLAST of mRNA_C-tenellus_contig10600.2.1 vs. uniprot
Match: A0A7S2JJT8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JJT8_9EUKA) HSP 1 Score: 205 bits (522), Expect = 1.020e-61 Identity = 100/172 (58.14%), Postives = 131/172 (76.16%), Query Frame = 1 Query: 190 FLPNGYPDSVRKEYMEYQMWDTVQALCSYLRGVLSTAAMLHASGVGDEKASAMAVALVWVLRDGFGMVGSLLFSYAASNHMDSNIKEWRLFADVINDIGLTLDLLAPVFR----SRFALVSSLATMCKALCGVAAGCTKTSITAHFSLQANIADISAKENAQETAVTLCGMV 693 FLP GYP SVR EY+++Q +DT+QA CSYLR +L+T+A+L +GVG + AS MA A+ WVLRDG GM GSL+FSY D N+KEWRLFAD+IND+GLTLD+LAP+ + F +V++L CK +CG+ AG T+ SIT HF+L+ N+AD+SAKE AQETAVTL G++ Sbjct: 77 FLPVGYPSSVRPEYLQFQAFDTLQAACSYLRNILTTSAILRGAGVGKDAASPMAAAIAWVLRDGVGMFGSLVFSYLVGTGFDRNVKEWRLFADIINDLGLTLDMLAPLAGPAGGTNFMVVAALGACCKTICGMTAGATRASITNHFALRNNLADVSAKEGAQETAVTLVGLL 248 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10600.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10600.2.1 >prot_C-tenellus_contig10600.2.1 ID=prot_C-tenellus_contig10600.2.1|Name=mRNA_C-tenellus_contig10600.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=231bp MTRSRLPSRDVHVLAREHDTSVPSYRRQFFTYSAMGPEKGLVPSTTRVAQback to top mRNA from alignment at C-tenellus_contig10600:1961..5123+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10600.2.1 ID=mRNA_C-tenellus_contig10600.2.1|Name=mRNA_C-tenellus_contig10600.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3163bp|location=Sequence derived from alignment at C-tenellus_contig10600:1961..5123+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10600:1961..5123+ >mRNA_C-tenellus_contig10600.2.1 ID=mRNA_C-tenellus_contig10600.2.1|Name=mRNA_C-tenellus_contig10600.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=693bp|location=Sequence derived from alignment at C-tenellus_contig10600:1961..5123+ (Choristocarpus tenellus KU2346)back to top |