mRNA_C-tenellus_contig1055.5.4 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1055.5.4 vs. uniprot
Match: D8LJQ1_ECTSI (Polyprenol reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJQ1_ECTSI) HSP 1 Score: 213 bits (542), Expect = 1.210e-60 Identity = 132/306 (43.14%), Postives = 172/306 (56.21%), Query Frame = 1 Query: 223 RLMPLCDHGKLR-NYGNSERFKTILRF--TVVPKCWFTHFYALGLVANTLFLTDIFIFRGSFVTTWVQTRSACCSNAFRIDGASELGVECLLCLCMMQLQLVRRLWECLRVTQWGNSSMSTLGYLVGILHYQSAVLTFLAESPYFEGVLGASIDESSGLKHLLYVGWLMVSGFKARHVGALSLFFLGWVKQHQAIRHLASLRTHGAGDGNGNTKDGKGKCSSSYGLPSEGWFRFVSSPHYLAEALTYISFVVVT--KGRTLG--VLLMMVWVLANQALVAVGTHAWYLKKFERCPNGWKRMIPWVW 1119 RL + HGKLR + LR+ VPK F+HFY LV++ L D ++ GS VQ +S C A R D ELGVE LLCL ++ L RRLWEC+ V+ WG+S MS GY G++HYQ V T L E+P + + SSG + + + + K RH A+ LF +G+V+QH+AIRHLASL+ GN TK ++ Y +P+ GWFR+VS PHY AE L Y SFV++ KGR LG L+ WV ANQALVA AWY +KFE P +R+IP VW Sbjct: 27 RLYSIFLHGKLRPGASTTSEAGFPLRWLKVEVPKRLFSHFYFFCLVSSALVFIDTILYGGSLFVGSVQGKSVCSRVAGRSDQVLELGVESLLCLLLLNLHAARRLWECVMVSSWGSSRMSLAGYAAGVVHYQLMVFTVLVEAPPLGLLAEEAWSRSSGGASDIVLA--LATSVKLRHAVAMGLFIIGFVRQHEAIRHLASLK------GNVGTK------ATKYAIPTAGWFRYVSCPHYFAELLVYGSFVLLGSFKGRGLGQGYLVAFAWVFANQALVAGWVQAWYQQKFEDYPRDRRRLIPGVW 318
BLAST of mRNA_C-tenellus_contig1055.5.4 vs. uniprot
Match: UPI0014559858 (polyprenol reductase-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014559858) HSP 1 Score: 129 bits (323), Expect = 1.520e-29 Identity = 93/309 (30.10%), Postives = 146/309 (47.25%), Query Frame = 1 Query: 226 LMPLCDHGKLRNY---GNSERFKT----ILRFTVVPKCWFTHFYALGLVANTLFLTDIF--IFRGSFVTTWVQTRSACCSN-AFRIDGASELGVECLLCLCMMQLQLVRRLWECLRVTQWGNSSMSTLGYLVGILHYQSAVLTFLAESPYFEGVLGASIDESSGLKHLLYVGWLMVSGFKARHVGALSLFFLGWVKQHQAIRH--LASLRTHGAGDGNGNTKDGKGKCSSSYGLPSEGWFRFVSSPHYLAEALTYISFVVVTKGRTLGVLLMMVWVLANQALVAVGTHAWYLKKFERCPNGWKRMIPWV 1116 L L +GK+RN G + +T + + VPK WF HFY + ++ N+ L ++ +F + W +N + AS+L + ++ + ++ +Q VRRL+ECL ++ + NS++ Y++G+L Y A + +AE P G + +D L L W V+G L FL W H + H A LRT G S+ +P WF VSSPHYLAE L Y S ++V + + L+ + LANQ ++ H WY +KF+ P G K +IPW+ Sbjct: 34 LWNLISYGKVRNVSGRGKPSKKQTWQSKLDKVLDVPKRWFIHFYIVSVICNSFLLLNLISVVFYNGQMPGWYLDALRFLTNYPLQNPKASQLSI--IIVIALLLIQGVRRLYECLVISSYSNSTIHISHYILGLLFYAFAGINVVAEGPELTGKV--QMDSVRQLAEQLE--WFHVAGI---------LMFL-WATYHHHVAHKIFAGLRT--------------GHKDRSHRIPHGDWFELVSSPHYLAEILIYASLIIVLGFQHSMIYLVFFFTLANQVFASISVHEWYCQKFDNYPKGRKAIIPWL 312
BLAST of mRNA_C-tenellus_contig1055.5.4 vs. uniprot
Match: UPI001BB247CD (polyprenol reductase-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB247CD) HSP 1 Score: 118 bits (295), Expect = 7.900e-26 Identity = 87/306 (28.43%), Postives = 141/306 (46.08%), Query Frame = 1 Query: 208 FICLSRLMP-LCDHGKLRNYGNSERFKTILRFTVVPKCWFTHFYALGLVANTLFLTDIF--IFRGSFVTTWVQTRSACCSNAFRIDGASELGVECLLCLCMMQLQLVRRLWECLRVTQWGNSSMSTLGYLVGILHYQSAVLTFLAESPYFEGVLGASIDESSGLKHLLYVGWLMVSGFKARHVGALSLFFLGWVKQHQAIRHLASLRTHGAGDGNGNTKDGKGKCSSSYGLPSEGWFRFVSSPHYLAEALTYISFVVVTKGRTLGVLLMMVWVLANQALVAVGTHAWYLKKFERCPNGWKRMIPWV 1116 + CL L+ + +GKL + + +I +F +VPK WF HFY L + N L +I F+GS + W T+ + + S + ++ + ++ + RR++EC+ ++ + NSS+ Y+ GI+ Y ++ +AE P F V G +I LKH+ + H+ L +F + H+A ASLR TK K S + +P WF +VS PHY AE L Y S V+ G L++ +V +NQ + H WY KF+ P K P++ Sbjct: 27 YNCLPNLLKDVVVYGKLLD---PRKRTSIQQFLLVPKRWFVHFYILSFIWNGFILMNILQCTFQGSVLPDWF-TKMITFLTKYPVSHPSADLLTVIIAMVVIVIHAHRRIYECVAISVYSNSSIHISHYITGIMFYSFVGISVVAEGPNFS-VKGGAIQALDLLKHIRWY-----------HIAGLLMFIWASLHHHRAHVIFASLRK---------TK----KDVSRHMIPQGDWFDYVSCPHYFAECLIYASLGVILGGYHTTWWLVLAFVFSNQIAASTKVHRWYQDKFDNYPKERKAFFPFL 303
BLAST of mRNA_C-tenellus_contig1055.5.4 vs. uniprot
Match: A0A1S3K4I9_LINUN (Polyprenol reductase n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K4I9_LINUN) HSP 1 Score: 115 bits (287), Expect = 8.690e-25 Identity = 88/296 (29.73%), Postives = 152/296 (51.35%), Query Frame = 1 Query: 244 HGKLRNYGNSERFKTILRFTVVPKCWFTHFYALGLVANTLFLT---DIFIFRGSFVTTWVQTRSACCSNAFRIDGASELGVECLLCLCMMQLQLVRRLWECLRVTQWGNSSMSTLGYLVGILHYQSAVLTFLAESPYFEGVLGASIDESSGLKHLLYVGWLMVSGFKARHVGALSLFFLGWVKQHQAIRHLASLRTHGAGDGNGNTKDGKGKCSS-SYGLPSEGWFRFVSSPHYLAEALTYISFVVVTKGRTLGVLLMMVWVLANQALVAVGTHAWYLKKFERCPNGWKRMIPWVW 1119 +GK R N T++R+ +PK +F +FYA+G+VAN+ L ++F + Q SA + D L LC+ +M +Q +RRL+EC ++ + S+M+ L +L+G Y + T L+E+P S++ ++ L+HL ++G +++ + VG + W QHQ + H+ N + +GK + ++ +P G F +VSSPHYL E + Y++F V R + V + V+VL NQA+ A+ T WYL ++ P K +IP+++ Sbjct: 40 YGKSRGKRNEW---TVMRYLEIPKSYFRYFYAVGIVANSAHLALAVQAYVFGVPPPAIYQQVVSAVSAEQVTTDALGTL-----LCISLMLIQDLRRLYECYFISVYSKSTMNLLHFLLGFYLYITFGWTVLSEAP--------SLN-TAPLQHL-HIG--LITWYHI--VGVIMFALASW--QHQ-VAHVTFA----------NLRKTEGKVRNYAHRIPRGGLFEYVSSPHYLMEIIIYLAFATVVGLRNISVWSVFVFVLLNQAVCAILTQKWYLDNYKTYPKSRKTLIPFIY 300
BLAST of mRNA_C-tenellus_contig1055.5.4 vs. uniprot
Match: R7UW84_CAPTE (Polyprenol reductase n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UW84_CAPTE) HSP 1 Score: 111 bits (277), Expect = 1.980e-23 Identity = 88/314 (28.03%), Postives = 144/314 (45.86%), Query Frame = 1 Query: 193 SPSFSFICLSRLMPLCDHGKLRNYGNSERFK-TILRFTVVPKCWFTHFYALGLVANTLFLTDIFIFRGSFVTTWVQTRSACCSNAFRIDGASELGVECLLCLC----MMQLQLVRRLWECLRVTQWGNSSMSTLGYLVGILHYQSAVLTFLAESPYFEGVLGASIDESSGLKHLLYVGWLMVSGFKARHVGALSLFFLGWVKQHQAIRHLASLRTHGAGDGNGNTKDGKGKCSS-SYGLPSEGWFRFVSSPHYLAEALTYISFVVVTKGRTLGVLLMMVWVLANQALVAVGTHAWYLKKFERCPNGWKRMIPWV 1116 +P F+ + L + L +R K ++++ VPK WFTHFYALG+V N L L + GS+ W + + D S C C MM +Q +RR EC+ V+ + S+M+ + +++G++ Y + L L ++P S+ + LK GW G ++LF H A + +LR KD +G+ + ++ +P GWF +VS PHY E L Y +F +V L V ++++V ANQA+ A +H WY F+ P + +IP++ Sbjct: 19 APGLLFLIVPNLPQVVIDLLLYGKARGKRTKWSLVQMIEVPKSWFTHFYALGIVVNGLALIVV---TGSYFYGWQPPQYLLNLLRYLRDKDSSNEDTCAFSACVLIGMMFVQNLRRYLECIFVSVYSKSTMNLIHFMLGVILYSTFHLAVLCDAP--------SLLSNPDLKKE-NPGWKCFFG--------VALFVWSSWHHHTAHKTFGNLR-----------KDNQGQVRTLTHHIPRGGWFEYVSCPHYFMEVLIYTAFGMVAGFSNLTVWSVVIFVYANQAIAARVSHNWYKDTFKDYPKQRRALIPFI 301
BLAST of mRNA_C-tenellus_contig1055.5.4 vs. uniprot
Match: H3AXF2_LATCH (Polyprenol reductase n=2 Tax=Latimeria TaxID=7896 RepID=H3AXF2_LATCH) HSP 1 Score: 111 bits (277), Expect = 2.480e-23 Identity = 91/297 (30.64%), Postives = 139/297 (46.80%), Query Frame = 1 Query: 235 LCDHGKLRNYGNSERFKTILRFTVVPKCWFTHFYALGLVANTLFLTDIF--IFRGSFVTTWVQTR-SACCSNAFRIDGASELGVECLLCLCMMQLQLVRRLWECLRVTQWGNSSMSTLGYLVGILHYQSAVLTFLAESPYFEGVLGASIDESSGLKHLLYVGWLMVSGFKARHVGALSLFFLGWVKQHQAIRHLASLRTHGAGDGNGNTKDGKGKCSSSYGLPSEGWFRFVSSPHYLAEALTYISFVVVTKGRTLGVLLMMVWVLANQALVAVGTHAWYLKKFERCPNGWKRMIPWV 1116 L +GK + +S R + LR VPK WF+HFYA+ ++ N L + + G W+QT C N+ + + A L V LL ++ L RRL EC+ V+ + N + + Y G+ +Y LT + LG S + L L VG H+ +++ + QH+ + LA LR +G + + +P WF VS PHYL E L Y++F + G+ L L++ +VL NQAL AV +H +Y+KKFE P K IP++ Sbjct: 45 LIRYGKTK--ADSGRRQKWLRVFDVPKRWFSHFYAVSVIWNGFLLLFLLQAVLLGHPFPVWLQTLLHFLCGNSVKENSAEVLSV--LLVQTLLWLHCFRRLTECVSVSVFSNGVIHLVQYCFGLSYYIVLGLTVTCRA----ASLGKSAIQVDDL--LAQVG--------LHHLVGTAVYLWASLHQHRCLVILADLRKIKSGQ----------VVNMGHMVPYGDWFEQVSCPHYLTELLIYVAFCITFGGQDLTWWLIVAYVLFNQALTAVLSHEYYIKKFESYPKHRKAFIPFI 313
BLAST of mRNA_C-tenellus_contig1055.5.4 vs. uniprot
Match: A0A2P5AK95_PARAD (Polyprenol reductase n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5AK95_PARAD) HSP 1 Score: 111 bits (278), Expect = 2.810e-23 Identity = 100/345 (28.99%), Postives = 154/345 (44.64%), Query Frame = 1 Query: 211 ICLSRLMPLCDHGKLRNYGNSERF--KTILRFTVVPKCWFTHFYALGLVANTLFL--TDIFIFR--------------------GSFVTTWVQTRSACCSNAFRIDGASELGVECLLCLCMMQLQLVRRLWECLRVTQWGNSS-MSTLGYLVGILHYQSAVLTFLAES--PYFEGVLGA---------------SIDESSGLKHLLYVGWLMVSGFKARHVGALSLFFLGWVKQHQAIRHLASLRTHGAGDGNGNTKDGKGKCSSSYGLPSEGWFRFVSSPHYLAEALTYISFVVVTKGRTLGVLLMMVWVLANQALVAVGTHAWYLKKFERCPNGWKRMIPWVW 1119 I SRL HG L + + + +FT+ P+ +F HFY L +V T L T I+ +R GS + +W+++ S + + + L L +M++ ++RRL+E + V + S+ M LGYL G+ Y +A L+ ++ VL ID + L+ +GWL + +GA ++FF GW+ QH L SLR + Y +P WF+FVSSPHYLAE + Y +V + R + V L+ V+V+AN A A TH WYL+KFE P +IP+V+ Sbjct: 25 IPCSRLSSF--HGLLLGFAKRGKIMQSSSKKFTL-PQKFFGHFYVLAVVWTTFLLAATWIYAYRTVPMVSKPFHYSTIANQLAGGSHIFSWLKSHSTPVEYRYSVWRSVFL-------LLLMEVHVLRRLYETIYVFNYSPSARMHVLGYLTGLFFYTAAPLSLCCNCIPEVYKFVLNGVAEFIVKGKSRMPAMEIDWWEFVIPLVKLGWL-------QWIGA-AIFFWGWIHQHHCHAILGSLRE-------------SREQVDEYVIPHGDWFKFVSSPHYLAEIVLYSGVLVASGARDVTVWLLFVFVVANLAFAAAETHRWYLRKFENYPRNRLAIIPFVY 338
BLAST of mRNA_C-tenellus_contig1055.5.4 vs. uniprot
Match: A0A7M7HJM1_STRPU (Polyprenol reductase n=3 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7HJM1_STRPU) HSP 1 Score: 109 bits (273), Expect = 7.290e-23 Identity = 83/280 (29.64%), Postives = 129/280 (46.07%), Query Frame = 1 Query: 289 ILRFTVVPKCWFTHFYALGLVANTLFLTDIF--IFRGSFVTTWVQTRSACCSNAFRIDGASELGVECLLCLCMMQLQLVRRLWECLRVTQWGNSSMSTLGYLVGILHYQSAVLTFLAESPYFEGVLGASIDESSGLKHLLYVGWLMVSGFKARHVGALSLFFLGWVKQHQAIRHL--ASLRTHGAGDGNGNTKDGKGKCSSSYGLPSEGWFRFVSSPHYLAEALTYISFVVVTKGRTLGVLLMMVWVLANQALVAVGTHAWYLKKFERCPNGWKRMIPWV 1116 I ++ +VPK WF HFY L + N L ++ +GS + W + ++ A +L + L+ + ++ + RR++ECL V+ + NSS+ Y+ GI Y ++ +AE P S+ + L+ +V + H+ L +F W H I H+ ASLR TK K S + +P WF +VS PHYLAE L Y S V+ G L++ +V +NQ +V H WY KFE P K +P+V Sbjct: 52 IQQYLLVPKRWFVHFYILSFIWNGFILMNVVQCTLQGSVLPLWFSKMMSFLTSYPVSPPAVDL-LTVLIAMAVIVIHAHRRIYECLAVSVYSNSSIHVTHYITGIFFYSFIGISIMAEGP------NLSLKGTGEPIQLMD----LVEDLRWHHIAGLLMFV--WASWHHHIAHVIFASLRK---------TK----KDVSRHMIPQGDWFDYVSCPHYLAETLIYTSLAVILGGHHRTWWLVLSFVFSNQTAASVKVHRWYQGKFEDYPKERKAFMPFV 305
BLAST of mRNA_C-tenellus_contig1055.5.4 vs. uniprot
Match: A0A7J7C649_TRIWF (Polyprenol reductase n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C649_TRIWF) HSP 1 Score: 110 bits (275), Expect = 8.700e-23 Identity = 99/340 (29.12%), Postives = 149/340 (43.82%), Query Frame = 1 Query: 220 SRLMPLCDHGKLRNYGNSERFKTILRFTV---VPKCWFTHFYALGLVANTLFLTDIFIFRGSFVTTWVQTRSACCSNAFRIDGASELG-----------------VECLLCLCMMQLQLVRRLWECLRVTQWGNSS-MSTLGYLVGILHYQSAVLTFLAESPY----------------FEGVLGASIDESSGLKHLLYVGWLMVSGFKARHVGALSLFFLGWVKQHQAIRHLASLRTHGAGDGNGNTKDGKGKC---SSSYGLPSEGWFRFVSSPHYLAEALTYISFVVVTKGRTLGVLLMMVWVLANQALVAVGTHAWYLKKFERCPNGWKRMIPWVW 1119 SRL PL + G S+R K + + VP+ +F HFY LG+ T+ L + + ++ S + A + G S + V L L +M++Q++RRL+E L V ++ NS+ M GYL+GI +Y +A L+ ++GV D L+ L +GW +G +LF GWV Q + L SLR KC S Y +P WF VSSPHYLAE + Y+ +V + G + L++ +V+AN A A TH WYL KFE P+ + + P+V+ Sbjct: 42 SRLNPLYE----LLLGFSKRGKIMQSSSYKLSVPQRFFLHFYLLGVAWTTVLLLTTWYYASQVAPLGSESLSLS-TAAGHLTGLSHISSLYKSRIHTADKRYKVWVSVFLLL-LMEMQVLRRLYETLYVFKYSNSARMHIFGYLMGIFYYTAAPLSLCTSFVLVALNFTLDKLAVLKLAYQGVPSMEFDWWGYLRPLANLGWHQWAG--------AALFAWGWVHQWRCHAILGSLR----------------KCREQSDEYVIPRGDWFEIVSSPHYLAEIVVYLGLLVASGGTDFTIWLLLGFVVANLAFAAAETHRWYLHKFEDYPSNRRVIFPFVY 351
BLAST of mRNA_C-tenellus_contig1055.5.4 vs. uniprot
Match: A0A2K1L1K5_PHYPA (Polyprenol reductase n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L1K5_PHYPA) HSP 1 Score: 109 bits (273), Expect = 2.080e-22 Identity = 92/335 (27.46%), Postives = 150/335 (44.78%), Query Frame = 1 Query: 235 LCDHGKLRNYGNSERFKTILRFTVVPKCWFTHFYALGLVANTLFLTDIFIFRGSFVTTWVQTRSACCSNAFRIDGASE-----LGVE--------------CLLCLCMMQLQLVRRLWECLRVTQWGN-SSMSTLGYLVGILHYQSAVLTFLA----ESPYFEGVLGASIDESSGLKHLLYVGWLMVS-------------GFKARHVGALSLFFLGWVKQHQAIRHLASLRT---HGAGDGNGNTKDGKGKCSSSYGLPSEGWFRFVSSPHYLAEALTYISFVVVTKGRTLGVLLMMVWVLANQALVAVGTHAWYLKKFERCPNGWKRMIPWVW 1119 LC GKL++ + ++ RFTV P+ WF+HFY LG++ NT+ L F+F S + F + GA + +GV+ L L M+++ L+RRL+E + + + + M LGY G+ Y A +TF + YF L + ++ G +L+ G +++ G +A L++F LG ++Q++ LASLR H + K + Y +P WF +VS HYLAE + ++ ++ + G L V L WV+ N A H WY KFE P + P+++ Sbjct: 39 LCRRGKLKS---ATSVQSPPRFTV-PQRWFSHFYILGILVNTILLAVAFLFAYICTFPLQSHESKVSAMVFSMSGAGQTHAGIVGVDNVPQLAKYRERAWSSFLLLAMLEIHLLRRLFESVYMFHYSPLARMHILGYFAGLGFYPGASITFFTVHFQDKDYFSA-LNTFVVQTIGRFVILHTGPPLLNFELRVQDHVKSFQGLQAFQWVGLAIFLLGSIQQYRLHSILASLRAKRVHTGVEAVLKPFSMDKKRADRYEIPLGSWFEWVSCAHYLAEIVIFLGILIASGGNNLNVWLCFTWVVLNLTFAASEMHKWYKTKFEDYPTCRYAIFPFIY 368 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1055.5.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1055.5.4 >prot_C-tenellus_contig1055.5.4 ID=prot_C-tenellus_contig1055.5.4|Name=mRNA_C-tenellus_contig1055.5.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=298bp MPLCDHGKLRNYGNSERFKTILRFTVVPKCWFTHFYALGLVANTLFLTDIback to top mRNA from alignment at C-tenellus_contig1055:9339..11764- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1055.5.4 ID=mRNA_C-tenellus_contig1055.5.4|Name=mRNA_C-tenellus_contig1055.5.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2426bp|location=Sequence derived from alignment at C-tenellus_contig1055:9339..11764- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1055:9339..11764- >mRNA_C-tenellus_contig1055.5.4 ID=mRNA_C-tenellus_contig1055.5.4|Name=mRNA_C-tenellus_contig1055.5.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=894bp|location=Sequence derived from alignment at C-tenellus_contig1055:9339..11764- (Choristocarpus tenellus KU2346)back to top |