mRNA_C-tenellus_contig10467.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10467.1.1
Unique NamemRNA_C-tenellus_contig10467.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10467.1.1 vs. uniprot
Match: A0A1V6RYM3_9EURO (NACHT domain-containing protein n=1 Tax=Penicillium vulpinum TaxID=29845 RepID=A0A1V6RYM3_9EURO)

HSP 1 Score: 54.3 bits (129), Expect = 5.790e-7
Identity = 28/48 (58.33%), Postives = 37/48 (77.08%), Query Frame = 1
Query:   13 GVQIDAEDSTGRTALHVAAQNGQTEALKELLCRSVDVNALDTFGCTPL 156
            GV ID+ DS G +ALH AAQ+G ++A+KELL RSV +++LD  G TPL
Sbjct: 1736 GVCIDSVDSAGLSALHHAAQSGNSQAVKELLKRSVKLSSLDFAGFTPL 1783          
BLAST of mRNA_C-tenellus_contig10467.1.1 vs. uniprot
Match: W5J585_ANODA (Asparaginase n=2 Tax=Nyssorhynchus TaxID=44543 RepID=W5J585_ANODA)

HSP 1 Score: 53.9 bits (128), Expect = 7.810e-7
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 1
Query:    1 YLLHGVQIDAEDSTGRTALHVAAQNGQTEALKELLCRSVDVNALDTFGCTPL 156
            Y + G  +  EDSTGRTALHVAA  G  E ++ L+    +VNA+D  G TPL
Sbjct:  611 YRIAGADLSQEDSTGRTALHVAAMYGHVEMVQYLVKNYAEVNAIDYLGLTPL 662          
BLAST of mRNA_C-tenellus_contig10467.1.1 vs. uniprot
Match: U9VT72_9CYAN (Glutaminase n=1 Tax=Leptolyngbya sp. Heron Island J TaxID=1385935 RepID=U9VT72_9CYAN)

HSP 1 Score: 51.6 bits (122), Expect = 5.110e-6
Identity = 24/55 (43.64%), Postives = 36/55 (65.45%), Query Frame = 1
Query:    1 YLLHGVQIDAEDSTGRTALHVAAQNGQTEALKELLCRSVDVNALDTFGCTPLHNS 165
            Y+  GV ++A D  GRTA+H+AA  GQ + +K LL  +V+ N  D +G TPL ++
Sbjct:  593 YIARGVSMEAADYDGRTAIHLAAAEGQLKVVKFLLANNVNPNIQDRWGFTPLDDA 647          
BLAST of mRNA_C-tenellus_contig10467.1.1 vs. uniprot
Match: A0A6I5PH59_9CYAN (Glutaminase n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5PH59_9CYAN)

HSP 1 Score: 51.2 bits (121), Expect = 6.990e-6
Identity = 23/55 (41.82%), Postives = 34/55 (61.82%), Query Frame = 1
Query:    1 YLLHGVQIDAEDSTGRTALHVAAQNGQTEALKELLCRSVDVNALDTFGCTPLHNS 165
            Y+  G+ +DA D  GRTA+H+AA  GQ   ++ LL   V+ N  D +G TPL ++
Sbjct:  600 YIARGIPMDAADYDGRTAIHLAASEGQLNVIEFLLANKVNPNVQDRWGFTPLDDA 654          
BLAST of mRNA_C-tenellus_contig10467.1.1 vs. uniprot
Match: A0A6H5II86_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5II86_9HYME)

HSP 1 Score: 51.2 bits (121), Expect = 7.080e-6
Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 1
Query:   16 VQIDAEDSTGRTALHVAAQNGQTEALKELLCRSVDVNALDTFGCTPLH 159
            +Q+++ +  G+TALH+A Q G  +A++ LL RS D NA D  G TPLH
Sbjct:  803 LQVNSRNQKGQTALHLALQYGNKQAIESLLTRSADPNATDENGSTPLH 850          
BLAST of mRNA_C-tenellus_contig10467.1.1 vs. uniprot
Match: A0A2A4YSB4_9FLAO (Glutaminase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2A4YSB4_9FLAO)

HSP 1 Score: 50.4 bits (119), Expect = 1.300e-5
Identity = 21/51 (41.18%), Postives = 36/51 (70.59%), Query Frame = 1
Query:   13 GVQIDAEDSTGRTALHVAAQNGQTEALKELLCRSVDVNALDTFGCTPLHNS 165
            GV ++A D  GRTA+H+AA  GQ E +K L+ + V+++ +D +G TP+ ++
Sbjct:  462 GVDLEAADYDGRTAIHLAASEGQLETVKYLVTKKVNISPIDRWGGTPIKDA 512          
BLAST of mRNA_C-tenellus_contig10467.1.1 vs. uniprot
Match: A0A3B3Q330_9TELE (Glutaminase n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3Q330_9TELE)

HSP 1 Score: 50.4 bits (119), Expect = 1.310e-5
Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 1
Query:    1 YLLHGVQIDAEDSTGRTALHVAAQNGQTEALKELLCRS-VDVNALDTFGCTPLHNSAYSD 177
            Y L GV ++A D  GR+ALH+AA  GQTEA K L+  +   ++  D +G TPL ++  S+
Sbjct:  604 YFLSGVDMNAVDYDGRSALHIAASQGQTEAAKFLIENAGASISVRDRWGTTPLQDAVRSN 663          
BLAST of mRNA_C-tenellus_contig10467.1.1 vs. uniprot
Match: A0A2B4R7G2_STYPI (Ankyrin-2 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4R7G2_STYPI)

HSP 1 Score: 50.4 bits (119), Expect = 1.320e-5
Identity = 28/65 (43.08%), Postives = 38/65 (58.46%), Query Frame = 1
Query:    4 LLHGVQIDAEDSTGRTALHVAAQNGQTEALKELLCRSVDVNALDTFGCTPL----HNSAYSDKVR 186
            +LHG  ++A DS GRTALH+AA NG  +A+  LL R   +   D  G TPL     N+A + + R
Sbjct:  586 ILHGSNLNAVDSHGRTALHLAAANGLADAVNVLLQRKAQIELPDESGQTPLVAAIKNAAVAPRER 650          
BLAST of mRNA_C-tenellus_contig10467.1.1 vs. uniprot
Match: A0A2B4S9F2_STYPI (Ankyrin repeat domain-containing protein 50 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4S9F2_STYPI)

HSP 1 Score: 50.4 bits (119), Expect = 1.330e-5
Identity = 28/65 (43.08%), Postives = 38/65 (58.46%), Query Frame = 1
Query:    4 LLHGVQIDAEDSTGRTALHVAAQNGQTEALKELLCRSVDVNALDTFGCTPL----HNSAYSDKVR 186
            +LHG  ++A DS GRTALH+AA NG  +A+  LL R   +   D  G TPL     N+A + + R
Sbjct: 1293 ILHGSNLNAVDSHGRTALHLAAANGLADAVNVLLQRKAQIELPDESGQTPLVAAIKNAAVAPRER 1357          
BLAST of mRNA_C-tenellus_contig10467.1.1 vs. uniprot
Match: UPI000C03C370 (ankyrin repeat domain-containing protein 50-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03C370)

HSP 1 Score: 50.4 bits (119), Expect = 1.330e-5
Identity = 25/51 (49.02%), Postives = 32/51 (62.75%), Query Frame = 1
Query:    4 LLHGVQIDAEDSTGRTALHVAAQNGQTEALKELLCRSVDVNALDTFGCTPL 156
            +LHG  I+A D  GRTALH+AA+NG  +A+  LL R   +   D  G TPL
Sbjct: 1007 ILHGADINAVDLNGRTALHLAAENGLADAVNVLLQRKAKLEIRDKTGKTPL 1057          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10467.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V6RYM3_9EURO5.790e-758.33NACHT domain-containing protein n=1 Tax=Penicilliu... [more]
W5J585_ANODA7.810e-750.00Asparaginase n=2 Tax=Nyssorhynchus TaxID=44543 Rep... [more]
U9VT72_9CYAN5.110e-643.64Glutaminase n=1 Tax=Leptolyngbya sp. Heron Island ... [more]
A0A6I5PH59_9CYAN6.990e-641.82Glutaminase n=1 Tax=Leptolyngbya sp. SIOISBB TaxID... [more]
A0A6H5II86_9HYME7.080e-647.92Uncharacterized protein n=1 Tax=Trichogramma brass... [more]
A0A2A4YSB4_9FLAO1.300e-541.18Glutaminase n=1 Tax=Flavobacteriales bacterium Tax... [more]
A0A3B3Q330_9TELE1.310e-543.33Glutaminase n=2 Tax=Paramormyrops kingsleyae TaxID... [more]
A0A2B4R7G2_STYPI1.320e-543.08Ankyrin-2 n=1 Tax=Stylophora pistillata TaxID=5042... [more]
A0A2B4S9F2_STYPI1.330e-543.08Ankyrin repeat domain-containing protein 50 n=2 Ta... [more]
UPI000C03C3701.330e-549.02ankyrin repeat domain-containing protein 50-like n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10467contigC-tenellus_contig10467:2280..2468 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog86106.I862_04400
PFAMsAnk,Ank_2,Ank_4
Model size189
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.35e-08
EggNOG OGsCOG0666@1|root,COG0666@2|Bacteria
Descriptionresponse to abiotic stimulus
Cds size189
COG categoryG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789132.98948-CDS-C-tenellus_contig10467:2279..24681680789132.98948-CDS-C-tenellus_contig10467:2279..2468Choristocarpus tenellus KU2346CDSC-tenellus_contig10467 2280..2468 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10467.1.1prot_C-tenellus_contig10467.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10467 2280..2468 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10467.1.1

>prot_C-tenellus_contig10467.1.1 ID=prot_C-tenellus_contig10467.1.1|Name=mRNA_C-tenellus_contig10467.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=63bp
YLLHGVQIDAEDSTGRTALHVAAQNGQTEALKELLCRSVDVNALDTFGCT
PLHNSAYSDKVR*
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mRNA from alignment at C-tenellus_contig10467:2280..2468+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10467.1.1 ID=mRNA_C-tenellus_contig10467.1.1|Name=mRNA_C-tenellus_contig10467.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=189bp|location=Sequence derived from alignment at C-tenellus_contig10467:2280..2468+ (Choristocarpus tenellus KU2346)
TATCTCCTCCATGGCGTGCAGATAGACGCTGAGGACTCCACAGGGAGGAC AGCCCTCCACGTGGCAGCCCAGAACGGTCAGACGGAAGCTTTGAAGGAGC TACTATGCCGATCTGTCGATGTAAATGCTTTGGACACATTTGGATGTACT CCATTGCACAACTCTGCCTATTCAGACAAGGTGAGGTAG
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Coding sequence (CDS) from alignment at C-tenellus_contig10467:2280..2468+

>mRNA_C-tenellus_contig10467.1.1 ID=mRNA_C-tenellus_contig10467.1.1|Name=mRNA_C-tenellus_contig10467.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=189bp|location=Sequence derived from alignment at C-tenellus_contig10467:2280..2468+ (Choristocarpus tenellus KU2346)
TATCTCCTCCATGGCGTGCAGATAGACGCTGAGGACTCCACAGGGAGGAC
AGCCCTCCACGTGGCAGCCCAGAACGGTCAGACGGAAGCTTTGAAGGAGC
TACTATGCCGATCTGTCGATGTAAATGCTTTGGACACATTTGGATGTACT
CCATTGCACAACTCTGCCTATTCAGACAAGGTGAGGTAG
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