mRNA_C-tenellus_contig10460.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10460.2.1 vs. uniprot
Match: D7FY33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY33_ECTSI) HSP 1 Score: 253 bits (647), Expect = 9.850e-84 Identity = 119/156 (76.28%), Postives = 140/156 (89.74%), Query Frame = 1 Query: 4 SIMEYNGSAVLAMAGKDCVGIASDRRLGVQLQTVSTDFEKIFKMNDKIMVGISGLATDVITVKELLTFRLNMYRLREEREIKPKTFSALVAHILYQKRFGPYFVEPLIAGLDDNNKPFLSAFDSIGSSANSDDFLVAGTCSPNLYGMCESLYRPDM 471 SI+EYNG+A+LAM GK+CVGI SD RLG Q QTV+TDFEKIFKM DK+MVG+ GLATDVIT+KELLTFRLN+YRLREEREIKP+TFSAL++HILYQKRFGPYFVEP++AGL ++N PF+SAFD IG+ +DDF+V GTC+ NLYGMCES YRPDM Sbjct: 2 SILEYNGAAILAMTGKNCVGICSDSRLGNQAQTVATDFEKIFKMGDKLMVGLPGLATDVITMKELLTFRLNLYRLREEREIKPETFSALMSHILYQKRFGPYFVEPIVAGLKEDNTPFISAFDLIGAPVVTDDFVVGGTCTNNLYGMCESFYRPDM 157
BLAST of mRNA_C-tenellus_contig10460.2.1 vs. uniprot
Match: A0A6U1MII2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MII2_9STRA) HSP 1 Score: 236 bits (602), Expect = 6.940e-77 Identity = 106/155 (68.39%), Postives = 136/155 (87.74%), Query Frame = 1 Query: 4 SIMEYNGSAVLAMAGKDCVGIASDRRLGVQLQTVSTDFEKIFKMNDKIMVGISGLATDVITVKELLTFRLNMYRLREEREIKPKTFSALVAHILYQKRFGPYFVEPLIAGLDDNNKPFLSAFDSIGSSANSDDFLVAGTCSPNLYGMCESLYRPD 468 SIMEYNG A +AMAGK+CVGI SD RLG+Q QTV+TDF K+FKMND++ +G++GLATD+ T+++LL FRLNMY+L+EERE++P+ FSA+++ +LY+KRFGPYFVEP+IAGL D+N PFLS D IG + +DDF+VAGTC+PNLYGMCESLYRPD Sbjct: 2 SIMEYNGGACIAMAGKNCVGICSDLRLGMQAQTVATDFPKVFKMNDRLFLGLTGLATDIQTMQQLLKFRLNMYKLKEEREMRPEVFSAMMSSVLYEKRFGPYFVEPIIAGLKDDNTPFLSTMDLIGCESKTDDFVVAGTCTPNLYGMCESLYRPD 156
BLAST of mRNA_C-tenellus_contig10460.2.1 vs. uniprot
Match: A0A7S0CG94_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CG94_9STRA) HSP 1 Score: 232 bits (591), Expect = 3.270e-75 Identity = 101/156 (64.74%), Postives = 138/156 (88.46%), Query Frame = 1 Query: 4 SIMEYNGSAVLAMAGKDCVGIASDRRLGVQLQTVSTDFEKIFKMNDKIMVGISGLATDVITVKELLTFRLNMYRLREEREIKPKTFSALVAHILYQKRFGPYFVEPLIAGLDDNNKPFLSAFDSIGSSANSDDFLVAGTCSPNLYGMCESLYRPDM 471 SI+EYNG+A++ MAGKDCVGIA+D RLG+QLQTV+TDF+K FKM+DK+ VG++GLATDVIT+++LL FRL+ Y L+EER+I PKTFS L++ +LY+KRFGP+F+EP++AGLD+NNKPFLS D IG+ + DF+V+GTC+ N+YG+CE+LY+PD+ Sbjct: 2 SILEYNGAAIIGMAGKDCVGIAADTRLGIQLQTVTTDFQKTFKMHDKLFVGLAGLATDVITLEQLLRFRLDQYELKEERQITPKTFSNLLSTLLYEKRFGPWFIEPIVAGLDENNKPFLSCMDLIGAGVQTKDFVVSGTCTANMYGLCETLYKPDL 157
BLAST of mRNA_C-tenellus_contig10460.2.1 vs. uniprot
Match: B7G8Z3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G8Z3_PHATC) HSP 1 Score: 228 bits (581), Expect = 1.090e-73 Identity = 105/156 (67.31%), Postives = 133/156 (85.26%), Query Frame = 1 Query: 4 SIMEYNGSAVLAMAGKDCVGIASDRRLGVQLQTVSTDFEKIFKMNDKIMVGISGLATDVITVKELLTFRLNMYRLREEREIKPKTFSALVAHILYQKRFGPYFVEPLIAGLDDNNKPFLSAFDSIGSSANSDDFLVAGTCSPNLYGMCESLYRPDM 471 SI+EYNG+A++AMAGKDCVGIA+DRRLGVQLQTV+TDF K+F M K VG++GLATDV T+K +L FR N+Y L+EERE+ P T S L++ +LY+KRFGPYFVEP++AGL++ NKPFLSA D IG+ +DDF+V+GTC+ NLYGMCESLYRPD+ Sbjct: 2 SILEYNGAAMIAMAGKDCVGIAADRRLGVQLQTVATDFNKVFAMGPKSYVGLAGLATDVQTLKNILEFRKNLYELKEEREMSPATLSHLLSTLLYEKRFGPYFVEPIVAGLNEKNKPFLSAMDLIGAPVQADDFVVSGTCTGNLYGMCESLYRPDL 157
BLAST of mRNA_C-tenellus_contig10460.2.1 vs. uniprot
Match: A0A1Z5JEG8_FISSO (20S proteasome subunit beta 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEG8_FISSO) HSP 1 Score: 227 bits (578), Expect = 3.110e-73 Identity = 101/156 (64.74%), Postives = 132/156 (84.62%), Query Frame = 1 Query: 4 SIMEYNGSAVLAMAGKDCVGIASDRRLGVQLQTVSTDFEKIFKMNDKIMVGISGLATDVITVKELLTFRLNMYRLREEREIKPKTFSALVAHILYQKRFGPYFVEPLIAGLDDNNKPFLSAFDSIGSSANSDDFLVAGTCSPNLYGMCESLYRPDM 471 S+M YNG+A++AMAGKDCVGIA+DRRLGVQL T++TDF KIF+M K+ VG++GL TDV T+K LL FR+N+Y+L+EERE+ PK S ++ ILY KRFGPYFVEP++AGLD+NNKPFLS D IG+++ DF+V+GTC+ N++GMCESLY+PDM Sbjct: 2 SVMTYNGAAIIAMAGKDCVGIAADRRLGVQLTTIATDFPKIFQMQPKLFVGLAGLGTDVQTLKNLLEFRMNLYKLKEEREMSPKVLSHMLGKILYSKRFGPYFVEPIVAGLDENNKPFLSTMDLIGATSEEKDFVVSGTCTGNMFGMCESLYKPDM 157
BLAST of mRNA_C-tenellus_contig10460.2.1 vs. uniprot
Match: A0A7S1FMY7_9STRA (Proteasome subunit beta n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMY7_9STRA) HSP 1 Score: 226 bits (577), Expect = 4.410e-73 Identity = 101/156 (64.74%), Postives = 134/156 (85.90%), Query Frame = 1 Query: 4 SIMEYNGSAVLAMAGKDCVGIASDRRLGVQLQTVSTDFEKIFKMNDKIMVGISGLATDVITVKELLTFRLNMYRLREEREIKPKTFSALVAHILYQKRFGPYFVEPLIAGLDDNNKPFLSAFDSIGSSANSDDFLVAGTCSPNLYGMCESLYRPDM 471 SI+EYNG A++AMAGKDCV IASD RLG+ +QTV+TDF+K+FKMN+++ VG++GLATDV T+ +LL FR +Y LREER++KPKTFS L++ +LY+KRFGPYF EP++AGLD+ NKPFLS D IG++ +DDF+V GTC+ NLYGMCE+LY+PD+ Sbjct: 2 SILEYNGGAIIAMAGKDCVAIASDTRLGINMQTVATDFKKVFKMNERLYVGLAGLATDVQTLDQLLRFRSELYELREERKMKPKTFSNLLSTMLYEKRFGPYFCEPVVAGLDEKNKPFLSGMDLIGATVIADDFVVTGTCTENLYGMCETLYKPDL 157
BLAST of mRNA_C-tenellus_contig10460.2.1 vs. uniprot
Match: A0A7S2FDP8_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FDP8_9STRA) HSP 1 Score: 227 bits (578), Expect = 8.240e-73 Identity = 102/156 (65.38%), Postives = 135/156 (86.54%), Query Frame = 1 Query: 4 SIMEYNGSAVLAMAGKDCVGIASDRRLGVQLQTVSTDFEKIFKMNDKIMVGISGLATDVITVKELLTFRLNMYRLREEREIKPKTFSALVAHILYQKRFGPYFVEPLIAGLDDNNKPFLSAFDSIGSSANSDDFLVAGTCSPNLYGMCESLYRPDM 471 SI+EYNG A++AM GK+CV IA D RLG+Q QTVS DF+KIFKMNDK+M+G++GLATDV+T+++LL F+LNMY+LREERE+KP+TFS L+ +LY+KRFGPYF EP++AGL++ N+PFLSA D IG+ + DF+V+GTC+ NL GMCE++YRPDM Sbjct: 32 SILEYNGGAIIAMTGKNCVAIACDTRLGLQQQTVSCDFQKIFKMNDKLMLGVTGLATDVLTLQQLLKFKLNMYKLREEREMKPETFSWLLTSVLYEKRFGPYFTEPVVAGLNEKNEPFLSAMDLIGAPVMTKDFVVSGTCTANLNGMCETMYRPDM 187
BLAST of mRNA_C-tenellus_contig10460.2.1 vs. uniprot
Match: A0A7S2XNS4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNS4_9STRA) HSP 1 Score: 226 bits (575), Expect = 8.880e-73 Identity = 101/156 (64.74%), Postives = 134/156 (85.90%), Query Frame = 1 Query: 4 SIMEYNGSAVLAMAGKDCVGIASDRRLGVQLQTVSTDFEKIFKMNDKIMVGISGLATDVITVKELLTFRLNMYRLREEREIKPKTFSALVAHILYQKRFGPYFVEPLIAGLDDNNKPFLSAFDSIGSSANSDDFLVAGTCSPNLYGMCESLYRPDM 471 SI+EYNG+A++AMAGKDCVGIA+D RLGVQ QTV+TDF+K+FKMND++ G++GLA+DV T+ +LL FR N+Y LREERE+ P+ FS L++ +LY+KRFGPYFVEP++AGLD+ KPFLS D IG+ +DDF+V+GTC+ N+YGMCE+LY+PDM Sbjct: 2 SILEYNGAAIIAMAGKDCVGIAADTRLGVQAQTVATDFKKVFKMNDRLFCGLAGLASDVQTLDQLLKFRQNLYELREEREMTPEVFSNLLSTLLYEKRFGPYFVEPIVAGLDNKGKPFLSGMDLIGAPVYTDDFVVSGTCTGNMYGMCETLYKPDM 157
BLAST of mRNA_C-tenellus_contig10460.2.1 vs. uniprot
Match: A0A835ZI80_9STRA (Nucleophile aminohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI80_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.790e-72 Identity = 103/156 (66.03%), Postives = 134/156 (85.90%), Query Frame = 1 Query: 4 SIMEYNGSAVLAMAGKDCVGIASDRRLGVQLQTVSTDFEKIFKMNDKIMVGISGLATDVITVKELLTFRLNMYRLREEREIKPKTFSALVAHILYQKRFGPYFVEPLIAGLDDNNKPFLSAFDSIGSSANSDDFLVAGTCSPNLYGMCESLYRPDM 471 SI+ YNG ++AM GK CVGIASD RLG Q QTV+ DF+KIF+M D+IM+G++GLATDV T+++LLTF++NMY+LREER++KPKTFSAL++ LY++RFGPYF EP++AGLD++ KPFLSA D IG+ +DDF+VAGT + NLYGMCE+LYRPDM Sbjct: 2 SILSYNGGDIIAMTGKGCVGIASDTRLGNQAQTVACDFQKIFRMTDRIMLGLTGLATDVQTLQQLLTFKINMYKLREERDMKPKTFSALLSTTLYERRFGPYFTEPVVAGLDEDGKPFLSAMDLIGAPVFTDDFVVAGTSTENLYGMCETLYRPDM 157
BLAST of mRNA_C-tenellus_contig10460.2.1 vs. uniprot
Match: A0A7S2V7E1_9STRA (Proteasome subunit beta n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V7E1_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.790e-72 Identity = 101/155 (65.16%), Postives = 130/155 (83.87%), Query Frame = 1 Query: 4 SIMEYNGSAVLAMAGKDCVGIASDRRLGVQLQTVSTDFEKIFKMNDKIMVGISGLATDVITVKELLTFRLNMYRLREEREIKPKTFSALVAHILYQKRFGPYFVEPLIAGLDDNNKPFLSAFDSIGSSANSDDFLVAGTCSPNLYGMCESLYRPD 468 SIM YNG A++AMAGKDCV IASDRRLG+QLQTVSTDF+K+F+++ KI VG++GLA+DV T+K LL FR+ +Y+L+EERE+ P S +++H+LY+KRFGPYF EP++AGLDD N+PFLS D IG++ DF+V GTCS NL+GMCESLYRPD Sbjct: 2 SIMSYNGGAIIAMAGKDCVAIASDRRLGIQLQTVSTDFQKVFRLSPKIYVGLAGLASDVQTLKNLLEFRMGLYKLKEEREMSPAVLSNMLSHLLYEKRFGPYFAEPIVAGLDDKNQPFLSTMDLIGANVCEKDFVVTGTCSGNLFGMCESLYRPD 156 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10460.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10460.2.1 >prot_C-tenellus_contig10460.2.1 ID=prot_C-tenellus_contig10460.2.1|Name=mRNA_C-tenellus_contig10460.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=154bp MEYNGSAVLAMAGKDCVGIASDRRLGVQLQTVSTDFEKIFKMNDKIMVGIback to top mRNA from alignment at C-tenellus_contig10460:2159..5488+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10460.2.1 ID=mRNA_C-tenellus_contig10460.2.1|Name=mRNA_C-tenellus_contig10460.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3330bp|location=Sequence derived from alignment at C-tenellus_contig10460:2159..5488+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10460:2159..5488+ >mRNA_C-tenellus_contig10460.2.1 ID=mRNA_C-tenellus_contig10460.2.1|Name=mRNA_C-tenellus_contig10460.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=462bp|location=Sequence derived from alignment at C-tenellus_contig10460:2159..5488+ (Choristocarpus tenellus KU2346)back to top |