mRNA_C-tenellus_contig1045.2.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1045.2.2 vs. uniprot
Match: A0A6H5KBH2_9PHAE (EF1_GNE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBH2_9PHAE) HSP 1 Score: 265 bits (676), Expect = 7.390e-83 Identity = 170/238 (71.43%), Postives = 193/238 (81.09%), Query Frame = 1 Query: 1 MAPKFDLSTPKGVLGFNGYMTARSYVEGYAYSKADADMFAACPSSPDKATAPHAYRWFIHIAAIIGVRSLNFSGAT-TAPAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGDDEEEAPASKP-EKSRADIMKEAKAAKDAKKKIDRSQIVLEVKPWEADTDLNELFKMISKVVIDGLVWGEAYKLVPVAFGVKKLVLSCVVEDSKVGVEDITDAIEAFDEYVQSVDMTTMNRL 708 MAPKFDLSTPKG++ FNGY++++SYVEGY+YS+ADADMFA C PDKA APHAYRW+IHIAAI GVRSL+ + ++ +APAA XXXXXXXXX XXXXXXXXXXXXX A+KP EKSRA+ M EAKAAKDAKKK+DRSQIV EVKPW+ +TDL LF I K I+GLVWGEA+KLVPVAFGVKKLVLSCVVED KVGVEDITD IE F++ VQSVDMTTMNRL Sbjct: 1 MAPKFDLSTPKGLMPFNGYISSKSYVEGYSYSQADADMFATCAGVPDKAKAPHAYRWYIHIAAIKGVRSLSLAPSSGSAPAAXXXXXXXXXXAAKATKVDXXXXXXXXXXXXXXXXX------AAKPAEKSRAEKMAEAKAAKDAKKKVDRSQIVFEVKPWDTETDLKGLFAKICKTKIEGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEGFEDEVQSVDMTTMNRL 232
BLAST of mRNA_C-tenellus_contig1045.2.2 vs. uniprot
Match: A0A485LAV1_9STRA (Aste57867_18076 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAV1_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.720e-46 Identity = 122/231 (52.81%), Postives = 163/231 (70.56%), Query Frame = 1 Query: 16 DLSTPKGVLGFNGYMTARSYVEGYAYSKADADMFAACPSSPDKATAPHAYRWFIHIAAIIGVRSLNFSGATTAPAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGDDEEEAPASKPEKSRADIMKEAKAAKDAKKKIDRSQIVLEVKPWEADTDLNELFKMISKVVIDGLVWGEAYKLVPVAFGVKKLVLSCVVEDSKVGVEDITDAIEAFDEYVQSVDMTTMNRL 708 DL+T G+ NG++TA+SYVEG+ +S AD+ +FA PS+PD P+ YRW++H A+ +G+R + + TA AAP XXXXXXXXXXXXXXXXXXXXXXXXXX RA+ K K K+ K I+RSQ+V+EVKPWEA+TDL EL I + +DGL WGE +KLVPVAFG+KKL++ C++ D KV ++DITDAIE+F++YVQSVD+ +MN++ Sbjct: 5 DLNTDIGLKKLNGFLTAKSYVEGFQFSAADSALFAKVPSTPDAGKYPNVYRWYVHTASKLGLRVALSAQSGTAAAAPKASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XRAEAAKANK--KEKPKPIERSQVVIEVKPWEAETDLEELAVKIKALEVDGLTWGEGHKLVPVAFGIKKLLVQCIIIDDKVLMDDITDAIESFEDYVQSVDIASMNKM 229
BLAST of mRNA_C-tenellus_contig1045.2.2 vs. uniprot
Match: A0A6H5JFV9_9PHAE (EF1_GNE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFV9_9PHAE) HSP 1 Score: 167 bits (424), Expect = 4.400e-46 Identity = 88/108 (81.48%), Postives = 93/108 (86.11%), Query Frame = 1 Query: 385 SRADIMKEAKAAKDAKKKIDRSQIVLEVKPWEADTDLNELFKMISKVVIDGLVWGEAYKLVPVAFGVKKLVLSCVVEDSKVGVEDITDAIEAFDEYVQSVDMTTMNRL 708 SRAD M AK AKDAKKKIDRSQIV EVKPW+ +TDL ELF I IDGLVWGEA+KLVPVAFGVKKLVLSCVVED KVGVEDITD IEAF++YVQSVDMTTMNRL Sbjct: 75 SRADKMAAAKKAKDAKKKIDRSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 182
BLAST of mRNA_C-tenellus_contig1045.2.2 vs. uniprot
Match: A0A6G0WJF4_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJF4_9STRA) HSP 1 Score: 168 bits (426), Expect = 9.290e-46 Identity = 116/231 (50.22%), Postives = 160/231 (69.26%), Query Frame = 1 Query: 16 DLSTPKGVLGFNGYMTARSYVEGYAYSKADADMFAACPSSPDKATAPHAYRWFIHIAAIIGVRSLNFSGATTAPAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGDDEEEAPASKPEKSRADIMKEAKAAKDAKKKIDRSQIVLEVKPWEADTDLNELFKMISKVVIDGLVWGEAYKLVPVAFGVKKLVLSCVVEDSKVGVEDITDAIEAFDEYVQSVDMTTMNRL 708 DL+T G+ NG++TA+SY+EG+ +S AD+++FA P++PD + P+ YRW++H AA +G+ + S + PAA XXXXXXXXXXXXX XXXXXXXXX RA+ K K K+ K I+RSQ+V+EVKPWEA+TDL EL I +V +DGL WGE +KLVPVAFG+KKL++ C++ D KV ++DIT+AIEAF++YVQSVD+ +MN++ Sbjct: 5 DLNTDIGLKKLNGFLTAKSYIEGFQFSAADSNLFAKVPATPDASKYPNVYRWYVHTAAKLGLH-VALSAQSATPAAXXXXXXXXXXXXXXPAKKEAEDXXXXXXXXXXXXXXXXXXXXXX---XRAEAAKANK--KEKPKPIERSQVVIEVKPWEAETDLEELAAKIKQVEVDGLTWGEGHKLVPVAFGIKKLLIQCIIIDDKVLMDDITEAIEAFEDYVQSVDIASMNKM 229
BLAST of mRNA_C-tenellus_contig1045.2.2 vs. uniprot
Match: A0A835YW42_9STRA (Eukaryotic elongation factor-1 B beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW42_9STRA) HSP 1 Score: 160 bits (406), Expect = 7.910e-43 Identity = 126/233 (54.08%), Postives = 153/233 (65.67%), Query Frame = 1 Query: 10 KFDLSTPKGVLGFNGYMTARSYVEGYAYSKADADMFAACPSSPDKATAPHAYRWFIHIAAIIGVRSLNFSGATTAPAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGDDEEEAPASKPEKSRADIMKEAKAAKDAKKKIDRSQIVLEVKPWEADTDLNELFKMIS-KVVIDGLVWGEAYKLVPVAFGVKKLVLSCVVEDSKVGVEDITDAIEAFDEYVQSVDMTTMNR 705 KFD + KG+ NG++ +RSY+EGYAYS AD+ +FAAC +PDKAT PHAYRW+IH+AA+ G+RSLN S A AP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KI+ S +V EVKPWEAD DL L++ I K +DGL W E L PVAFG+ KLV++C +ED KVG+ DI+D IEA ++ VQSVD+ M R Sbjct: 5 KFDPTNAKGLGALNGFLASRSYMEGYAYSAADSALFAACNGAPDKATYPHAYRWYIHVAALTGLRSLNLSAA--APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXKIEMSNVVYEVKPWEADQDLKALYEKIKEKCAMDGLRWSEGCTLAPVAFGINKLVIACTIEDDKVGLNDISDMIEALEDDVQSVDLVNMQR 228
BLAST of mRNA_C-tenellus_contig1045.2.2 vs. uniprot
Match: W4FR25_9STRA (EF1_GNE domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FR25_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.810e-41 Identity = 96/232 (41.38%), Postives = 144/232 (62.07%), Query Frame = 1 Query: 16 DLSTPKGVLGFNGYMTARSYVEGYAYSKADADMFAACPSSPDKATAPHAYRWFIHIAAIIGVR-SLNFSGATTAPAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGDDEEEAPASKPEKSRADIMKEAKAAKDAKKKIDRSQIVLEVKPWEADTDLNELFKMISKVVIDGLVWGEAYKLVPVAFGVKKLVLSCVVEDSKVGVEDITDAIEAFDEYVQSVDMTTMNRL 708 D+++ G+ NG++TA+SY+EGY +S AD+ +F+ + PD A P+ YRW++H A+ +G+R +L P++P X XXXXXXXXX RAD K K K+ K ++RSQ+V+EVKPWEA+TDL +L I + I+GL WGE +KLVPVA+G+KKL++ C++ D V ++DITDAIE+F+++VQSVD+ +MN++ Sbjct: 5 DVASEVGLKKLNGFLTAKSYIEGYQFSAADSTLFSKFTTVPDAAKVPNVYRWYVHTASKLGLRVALTARNQVAQPSSPKAAAKPSTPXASTPKAAKPADXXXXXXXXXXXXXXXXXXXXXXXXXXRADAAKAGK--KEKAKPVERSQVVIEVKPWEAETDLLDLAAKIKALEINGLTWGEGHKLVPVAYGIKKLLVQCIIVDDLVLLDDITDAIESFEDFVQSVDVASMNKV 234
BLAST of mRNA_C-tenellus_contig1045.2.2 vs. uniprot
Match: D8LM77_ECTSI (Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM77_ECTSI) HSP 1 Score: 167 bits (424), Expect = 3.220e-41 Identity = 95/128 (74.22%), Postives = 101/128 (78.91%), Query Frame = 1 Query: 337 LFGDDEE----EAPASKPEKSRADIMKEAKAAKDAKKKIDRSQIVLEVKPWEADTDLNELFKMISKVVIDGLVWGEAYKLVPVAFGVKKLVLSCVVEDSKVGVEDITDAIEAFDEYVQSVDMTTMNRL 708 LFGDDE EAPAS SRA+ M AK+AKDA KK+DRSQIV EVKPWEA DL LF I K IDGLVWGEA+KLVPVAFGVKKLVLSCVV DSKVGVEDITD IE F++ VQSVDMTTMNRL Sbjct: 722 LFGDDEAGEEGEAPASGAGMSRAEQMAAAKSAKDANKKVDRSQIVFEVKPWEAGADLKGLFDKIRKTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKVGVEDITDVIEKFEDEVQSVDMTTMNRL 849
BLAST of mRNA_C-tenellus_contig1045.2.2 vs. uniprot
Match: A0A024TSA9_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSA9_9STRA) HSP 1 Score: 153 bits (387), Expect = 5.380e-40 Identity = 104/233 (44.64%), Postives = 146/233 (62.66%), Query Frame = 1 Query: 16 DLSTPKGVLGFNGYMTARSYVEGYAYSKADADMFAACPSSPDKATAPHAYRWFIHIAAIIGVRSLNFSGATTAPAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGDDEEEAPASKPEKSRADIMKEAKAA--KDAKKKIDRSQIVLEVKPWEADTDLNELFKMISKVVIDGLVWGEAYKLVPVAFGVKKLVLSCVVEDSKVGVEDITDAIEAFDEYVQSVDMTTMNRL 708 D+ + G+ NG++TA+SY+EG+ +S AD+ +FA + PD A P+ YRW+IHIA+ +G+R + + T + A P XXXXXXXXX XXXXX EA A K+ K ++RSQ+VLEVKPWEA+TDL EL I + I+GL WGE +KLVPVAFG+KKL++ C++ D V ++DIT+AIEAF++YVQSVD+ +MN++ Sbjct: 5 DVESEVGLKKLNGFLTAKSYIEGFQFSAADSALFAKFNAVPDAAKVPNVYRWYIHIASKLGLR-VALAARTPSAAKPSTPKAXXXXXXXXXSTPKGKKPAADXXXXXXXXXXXXXXXXXXXXXXXXXXRAEAAKAGKKEKAKPVERSQVVLEVKPWEAETDLVELAGKIKALEINGLNWGEGHKLVPVAFGIKKLLIQCIIVDDLVLLDDITEAIEAFEDYVQSVDVASMNKV 236
BLAST of mRNA_C-tenellus_contig1045.2.2 vs. uniprot
Match: A0A812VGE6_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VGE6_SYMMI) HSP 1 Score: 152 bits (384), Expect = 1.550e-39 Identity = 94/239 (39.33%), Postives = 136/239 (56.90%), Query Frame = 1 Query: 31 KGVLGFNGYMTARSYVEGYAYSKADADMFAACPSSPDKATAPHAYRWFIHIAAIIGVRSLNFSGATTA-PAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGDDEEEAPA-----SKPEKSRADIMKEAKAA-------KDAKKKIDRSQIVLEVKPWEADTDLNELFKMISKVVIDGLVWGEAYKLVPVAFGVKKLVLSCVVEDSKVGVEDITDAIEAFDEYVQSVDMTTMNRL 708 K V N ++ RSYVEGY+ S AD AA P KA+APHA+RW +HI A+IGV ++ FSG+ ++ P A +FGD+E +K + R + K+ K K +K +++S IVLEVKPWEADTDL ++K I K +GL WG ++KL PVAFG+KKLV++C + DS V ++D+TD IEA +++VQSV++ +MN++ Sbjct: 14 KSVNELNQHLATRSYVEGYSLSDADRAALAALGGVPSKASAPHAFRWAVHIMALIGVENVTFSGSVSSEPTAAVQKEAKKPAATDDFDD--------------MFGDEEXXXXXXXXXXNKARQERMALAKKLKXXXXXXXXXKQKEKPVEKSLIVLEVKPWEADTDLEAVWKEIIKYEQEGLQWGASFKLEPVAFGIKKLVMTCTIVDSLVLLDDVTDNIEAMEDFVQSVNVASMNKI 238
BLAST of mRNA_C-tenellus_contig1045.2.2 vs. uniprot
Match: A0A024GJX5_9STRA (EF1_GNE domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GJX5_9STRA) HSP 1 Score: 150 bits (380), Expect = 2.720e-39 Identity = 110/231 (47.62%), Postives = 151/231 (65.37%), Query Frame = 1 Query: 16 DLSTPKGVLGFNGYMTARSYVEGYAYSKADADMFAACPSSPDKATAPHAYRWFIHIAAIIGVRSLNFSGATTAPAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFGDDEEEAPASKPEKSRADIMKEAKAAKDAKKKIDRSQIVLEVKPWEADTDLNELFKMISKVVIDGLVWGEAYKLVPVAFGVKKLVLSCVVEDSKVGVEDITDAIEAFDEYVQSVDMTTMNRL 708 L P+G+ NG++T+RSY++GY+ S D ++ S P+ +T P+ YRW++HIA+ G+R+L +SG+ + XXXXXXXXXXXXXXXXXXXXXXX RA+ K AKA K+ KK ++RSQ+V EVKPWE +T+L EL I +GL WGE +KLV VAFG+KKL++ CV+ D V +EDITD IE F++YVQSVD+ +MN++ Sbjct: 7 QLDRPEGLKKLNGFLTSRSYIDGYSLSDTDLTVYKQIASCPEPSTYPNVYRWYVHIASKCGIRTL-WSGSASKKXXXXXXXXXXXXXXXXXXXXXXXXXX------------------------RAETAKNAKA-KEKKKVVERSQVVCEVKPWEQETNLEELAIKIKATKKEGLTWGEGHKLVDVAFGIKKLLVQCVILDDLVSLEDITDIIEQFEDYVQSVDIASMNKI 211 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1045.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1045.2.2 >prot_C-tenellus_contig1045.2.2 ID=prot_C-tenellus_contig1045.2.2|Name=mRNA_C-tenellus_contig1045.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=237bp MAPKFDLSTPKGVLGFNGYMTARSYVEGYAYSKADADMFAACPSSPDKATback to top mRNA from alignment at C-tenellus_contig1045:6614..11514- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1045.2.2 ID=mRNA_C-tenellus_contig1045.2.2|Name=mRNA_C-tenellus_contig1045.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4901bp|location=Sequence derived from alignment at C-tenellus_contig1045:6614..11514- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1045:6614..11514- >mRNA_C-tenellus_contig1045.2.2 ID=mRNA_C-tenellus_contig1045.2.2|Name=mRNA_C-tenellus_contig1045.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=711bp|location=Sequence derived from alignment at C-tenellus_contig1045:6614..11514- (Choristocarpus tenellus KU2346)back to top |