mRNA_C-tenellus_contig1044.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1044.1.1 vs. uniprot
Match: A0A7S2V9K5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9K5_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 3.630e-13 Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = -3 Query: 2001 YF-QVALMYNKPRQATVKAIGHLEVLSLDRKTFKRVMGPMEDILKRNMSTYKNITARTI 2174 YF ++ALM NKPRQATV A G L VL+LDRKTFKRVMGP++DILKRN+ Y I A + Sbjct: 42 YFGEIALMQNKPRQATVLAEGALSVLALDRKTFKRVMGPLDDILKRNIVHYSQIVASGV 100
BLAST of mRNA_C-tenellus_contig1044.1.1 vs. uniprot
Match: A0A812WD58_SYMMI (Pka-R1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WD58_SYMMI) HSP 1 Score: 75.1 bits (183), Expect = 1.560e-12 Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = -3 Query: 2004 YF-QVALMYNKPRQATVKAIGHLEVLSLDRKTFKRVMGPMEDILKRNMSTYKNITART 2174 YF ++AL+ +KPRQATVKA G+L+VL+LDR TF RV+GPM+DI+KRNM Y TA T Sbjct: 61 YFGEIALLTDKPRQATVKAEGNLKVLALDRATFTRVLGPMDDIMKRNMEQYNKYTADT 118
BLAST of mRNA_C-tenellus_contig1044.1.1 vs. uniprot
Match: D7G8K9_ECTSI (Myb-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K9_ECTSI) HSP 1 Score: 77.8 bits (190), Expect = 1.150e-11 Identity = 90/326 (27.61%), Postives = 141/326 (43.25%), Query Frame = 2 Query: 998 RKSAPVLDWWRSQRLSHTPDGNVVVSVGSSQDELFHEDS--MATSFALCTTDPLTRECDAIPCRTSMINNSRWTQAQLSMLKMAQVGINPGDADFWEHVARQVGGKDAYACQEKWFESLSTPKQQKKKGQPK--------RPANDPSSSSSKQSVGVSQGSPPQKTLKGDSSLDDLFNATPSQKRDRAILKSSARVKST-------GARAVAKPHQASKAKRG---GGREGDVSKSYVEHVTKKFQKARREHSLVLNACAPSNDSPGGAPAVLRKMSAVAKSGDYKINASVSSNGIVKVTASGEIDCGSSPCVNYRYLNSGDEESD 1915 R +APVLDWWRSQRL+ TP VV G+++ L + A + C + R+ + WT+AQ+ L+ AQ P + FW VA V G++ CQ+KWFE +TP+ + + + P +D S ++ + +P ++T + +S DDLF ATP + R +++ V T G A + A A G + VS+ YV+ ++K+ +K + A + R A SG +K+ VS +G V V ++ D G+S S D ESD Sbjct: 28 RGAAPVLDWWRSQRLTKTPSVGVV---GAARFPLGQPSTGNHADMDSACRLKTVGRDANG--------EEEPWTKAQMHSLRRAQAETAPSTSAFWSAVACNVDGRNPQECQQKWFEHFATPRGRSRNASARGCISQRIGTPPSDDMSRNTPAAAAYRSLAPAKQTPERGAS-DDLFQATPIRGHRRFGVQARGDVLDTRTPRTPAGPGAPCRDSSALDAAPGCEDADYKRGVSRKYVKALSKRMRKGALQSGKNRKAARGQAIRKPASVVAGRTTHTAAVSGGHKLQVCVSGSGAVSVQSTYNSDDGASSV-------SDDVESD 334
BLAST of mRNA_C-tenellus_contig1044.1.1 vs. uniprot
Match: D7G8K8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8K8_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 4.650e-11 Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = -3 Query: 2001 YF-QVALMYNKPRQATVKAIGHLEVLSLDRKTFKRVMGPMEDILKRNMSTYKNITARTI 2174 YF +VAL++ +PR ATVKA+G L++LSLDR+TFKRVMG ME ILKRNM YK I A I Sbjct: 344 YFGEVALIFAQPRGATVKAVGPLQLLSLDRRTFKRVMGSMETILKRNMKAYKRIAASNI 402
BLAST of mRNA_C-tenellus_contig1044.1.1 vs. uniprot
Match: A0A7S4DBM9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBM9_HETAK) HSP 1 Score: 76.3 bits (186), Expect = 6.730e-11 Identity = 47/134 (35.07%), Postives = 65/134 (48.51%), Query Frame = 2 Query: 974 LVKTTRSGRKSAPVLDWWRSQRLSHTPDGNVVVSVGSSQDELFHEDSMATSFALCTTDPLTRECDAIPCRTSMINNSRWTQAQLSMLKMAQVGINPGDADFWEHVARQVGGKDAYACQEKWFESLSTPKQQKKK 1375 L+++TRSGRK+ VL+WWR QRL V QD L S +T L +D + RW+ Q+ L+ A +P DFW+ VA+ V GK+ C +KWFE +TPK KK+ Sbjct: 31 LLRSTRSGRKTTSVLEWWRGQRL-----------VSGVQDTLVAVGSESTVRFLHKSDD---------------RSKRWSHVQIEQLQHAHSTTDPLVGDFWKKVAKHVDGKNDSECHDKWFEQYATPKVPKKR 138
BLAST of mRNA_C-tenellus_contig1044.1.1 vs. uniprot
Match: A0A0N7L881_PLAHL (Camp-dependent protein kinase type i regulatory subunit-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L881_PLAHL) HSP 1 Score: 72.8 bits (177), Expect = 3.000e-10 Identity = 35/59 (59.32%), Postives = 46/59 (77.97%), Query Frame = -3 Query: 2001 YF-QVALMYNKPRQATVKAIGHLEVLSLDRKTFKRVMGPMEDILKRNMSTYKNITARTI 2174 YF ++AL+ +PRQATV A G ++ L+LDRKTFKRVMGP+EDILKRN+ Y ++ A I Sbjct: 232 YFGEIALLTTRPRQATVTAKGKVKCLTLDRKTFKRVMGPLEDILKRNIDKYNSVIANNI 290
BLAST of mRNA_C-tenellus_contig1044.1.1 vs. uniprot
Match: A0A6U4LLS2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4LLS2_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.260e-10 Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = -3 Query: 2001 YF-QVALMYNKPRQATVKAIGHLEVLSLDRKTFKRVMGPMEDILKRNMSTYKNITARTI 2174 YF ++AL+ K RQATV A+G L+V+ LDRKTFKRVMGP+E+ILKRNM Y + A+ I Sbjct: 335 YFGEIALLTPKMRQATVTAVGQLKVMKLDRKTFKRVMGPLEEILKRNMEHYNKVRAQNI 393
BLAST of mRNA_C-tenellus_contig1044.1.1 vs. uniprot
Match: A0A225W091_9STRA (Cyclic AMP-dependent protein kinase n=27 Tax=Peronosporaceae TaxID=4777 RepID=A0A225W091_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.280e-10 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = -3 Query: 2001 LADNFLYFQVALMYNKPRQATVKAIGHLEVLSLDRKTFKRVMGPMEDILKRNMSTYKNITARTI 2192 L + ++AL+ +PRQATV A G ++ L+LDRKTFKRVMGP+EDILKRN++ Y +I A I Sbjct: 331 LTSGAYFGEIALLTTRPRQATVTAEGKVKCLTLDRKTFKRVMGPLEDILKRNINKYNSIIANNI 394
BLAST of mRNA_C-tenellus_contig1044.1.1 vs. uniprot
Match: A0A484E280_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E280_BRELC) HSP 1 Score: 73.9 bits (180), Expect = 3.830e-10 Identity = 39/71 (54.93%), Postives = 53/71 (74.65%), Query Frame = -3 Query: 2004 SSPLADNFL----YF-QVALMYNKPRQATVKAIGHLEVLSLDRKTFKRVMGPMEDILKRNMSTYKNITART 2201 +SP+A L YF ++AL+ +PRQATV A G+++ L+LDRKTFKRVMGP+EDILKRN+ Y ++ A T Sbjct: 351 ASPVAMGELTSGAYFGEIALLTTRPRQATVTAKGNVKCLTLDRKTFKRVMGPLEDILKRNIDKYNSVIANT 421
BLAST of mRNA_C-tenellus_contig1044.1.1 vs. uniprot
Match: A0A3M6VPF8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPF8_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 4.420e-10 Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = -3 Query: 2001 LADNFLYFQVALMYNKPRQATVKAIGHLEVLSLDRKTFKRVMGPMEDILKRNMSTYKNITARTI 2192 L + ++AL+ +PRQATV A G ++ L+LDRKTFKRVMGP+EDILKRN+ Y +I A I Sbjct: 333 LTSGAYFGEIALLTTRPRQATVTAQGKVKCLTLDRKTFKRVMGPLEDILKRNIDKYNSIIANNI 396 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1044.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1044.1.1 >prot_C-tenellus_contig1044.1.1 ID=prot_C-tenellus_contig1044.1.1|Name=mRNA_C-tenellus_contig1044.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=595bp MEPRHDTVDRPPSVPPIRSLTTANVSISEPSVFKNFTPSTTNKLDEGDGCback to top mRNA from alignment at C-tenellus_contig1044:2..2345+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1044.1.1 ID=mRNA_C-tenellus_contig1044.1.1|Name=mRNA_C-tenellus_contig1044.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2344bp|location=Sequence derived from alignment at C-tenellus_contig1044:2..2345+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1044:2..2345+ >mRNA_C-tenellus_contig1044.1.1 ID=mRNA_C-tenellus_contig1044.1.1|Name=mRNA_C-tenellus_contig1044.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1785bp|location=Sequence derived from alignment at C-tenellus_contig1044:2..2345+ (Choristocarpus tenellus KU2346)back to top |