mRNA_C-tenellus_contig1043.3.4 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1043.3.4 vs. uniprot
Match: D7G813_ECTSI (MATE efflux family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G813_ECTSI) HSP 1 Score: 563 bits (1450), Expect = 2.760e-192 Identity = 311/533 (58.35%), Postives = 385/533 (72.23%), Query Frame = 2 Query: 137 RSLIGTVQALAARPNLVVPDSPVSGTEGELSSLLPHIVL-------RRKIVSFWQGAWKRNEHDKAIIALALPTLGAVLVDPVLSMVDTCYVGRLGALSLAAIGPSSAAFGFVFSTASSVLMVPTAVMISKARAKSNTVGVGRTLTFASALAAVLGIFLSWFFYVHCSVLLSVLGAPTQALHLAIPYLRWRALSMPANLLLLVAAGACRGMKEPKVSLVNGFLIGGINMVLDPLLMFGLNLGTAGAAMATAAAQWATLERAVMQVGLLAYIRYFWKRREELGLGNPTSLPTKKEMQEFIGASGTMFFRQLCNVGAWTLMASIASRMGVLEIAAHQLILSMWLVIAFVQDSLGVAGQVLVSQYLGMSRD---ASGTPNQKGEQSEAIIFQETARSVAKRVLTLSLGVGIVLASCSSVVVPLMLPLICHSAEVVKIVSQVFLMIMFAFPMCCLVWSWDALFYGASDFVYNAKTVAVASALGVAGTLCSLSRGWGVRGLWVSMTFVLFGVRLLAHTWRFNSPHGPFGAGQITGEDK 1705 R ++G V A + +LVVP SP G +SL P L ++KI S +G K + DK I ALALPTLGAVL+DP LS+VDT YVGRLGALSLAAIGP +AAF FVF TAS L+V T+V++S+ RA ++ +GRTLT AS LA +G+ ++ FYV+ + LLS++GAP + + LA+PYLRWRA + PANL LLVA GA RGM EPK L N ++G +N+VLDP+LMF LG GAAMATAAAQW VG L Y +Y W RRE LGL SLP E+++F+GA G M FRQLCNVGAWT+MAS A+RMG+LE+AAHQL+LS+WLVIAFVQ+SLG +GQVLV+QYLG++RD ASG + A+ +ETARS+AKRVLTLSLG+G LA+CS +V P +L ++C S EV +VSQVF I++AFPMCC+VW+WD+LFYGASDFVYNAKTVAVAS GV G++ SL RGWGV GLWVSMT+VLFGVR+ AH WRFNS GPFG E + Sbjct: 51 RPVLGMVMA-SEDASLVVPPSPADDXXGTSASLPPAATLVRKRTRAKQKINSAVEGVSKPHVFDKEIFALALPTLGAVLIDPCLSLVDTGYVGRLGALSLAAIGPCAAAFNFVFVTASCALLVSTSVLVSEQRAMNDRAAIGRTLTLASGLAVSMGVIMAVLFYVNSAGLLSLMGAPQEVMSLAVPYLRWRASAFPANLFLLVACGAFRGMGEPKAGLNNAIVVGVVNLVLDPVLMFSCGLGVTGAAMATAAAQW---------VGALVYTKYMWDRRERLGLAGGVSLPGLGEVKQFLGAGGAMVFRQLCNVGAWTVMASAATRMGILEVAAHQLMLSLWLVIAFVQESLGSSGQVLVAQYLGLARDSHKASGLDLKAAWDGAALESRETARSIAKRVLTLSLGLGFSLAACSRLVFPALLSVVCQSREVAALVSQVFPTILYAFPMCCVVWTWDSLFYGASDFVYNAKTVAVASLCGVVGSVLSLRRGWGVLGLWVSMTYVLFGVRMAAHLWRFNSRRGPFGPSAFMDESR 573
BLAST of mRNA_C-tenellus_contig1043.3.4 vs. uniprot
Match: A0A4D9CXB6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXB6_9STRA) HSP 1 Score: 408 bits (1048), Expect = 9.110e-133 Identity = 233/482 (48.34%), Postives = 318/482 (65.98%), Query Frame = 2 Query: 257 RKIVSFWQGAWKRNEHDKAIIALALPTLGAVLVDPVLSMVDTCYVGRLGALSLAAIGPSSAAFGFVFSTASSVLMVPTAVMISKARAKSNTVGVGRTLTFASALAAVLGIFLSWFFYVHCSVLLSVLGAPT-QALHLAIPYLRWRALSMPANLLLLVAAGACRGMKEPKVSLVNGFLIGGINMVLDPLLMFGLNLGTAGAAMATAAAQWATLERAVMQVGLLAYIRYFWKRREELGLGNPTSL-PTKKEMQEFIGASGTMFFRQLCNVGAWTLMASIASRMGVLEIAAHQLILSMWLVIAFVQDSLGVAGQVLVSQYLGMSRDASGTPNQKGEQSEAIIFQET-ARSVAKRVLTLSLGVGIVLASCSSVVVPLMLPLICHSAEVVKIVSQVFLMIMFAFPMCCLVWSWDALFYGASDFVYNAKTVAVASALGVAGTLCSLSRGWGVRGLWVSMTFVLFGVRLLAHTWRFNSPHGPFGAGQIT 1693 R + W + E+D I LALPTLGAVL+DP LS+VDT +VG+LG ++LA++GP +A + +F+TAS + V TAV+I++ +A + GRTL A + LGIF + S L ++GA + + + L PYL WRA ++PAN+ LLVA GA RG+ + + NG ++G +N+VLDP+LMF NLG AGAAMATA AQW +G L+YI +R+E GL + P ++QEF+ A M FR LCNVGAWTLMASIA+RMGV+EIAAHQLILSMWLVIAFVQD++G AGQVLVSQ LG G AI + AR++AKRV++ S +G+ L+ +V+P ++PL C S EV+ + S V +++ FP+CC+VW+WD+++YGASDF YNAK +AV+S++ V+ TL SL WG+ GLW SM FV FG+R++AH RFNS HGPFG ++ Sbjct: 34 RSLKEKWARLTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQW---------IGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLG----------NPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLS 496
BLAST of mRNA_C-tenellus_contig1043.3.4 vs. uniprot
Match: W7U9X4_9STRA (Mate efflux family protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U9X4_9STRA) HSP 1 Score: 408 bits (1049), Expect = 8.000e-131 Identity = 233/484 (48.14%), Postives = 319/484 (65.91%), Query Frame = 2 Query: 251 LRRKIVSFWQGAWKRNEHDKAIIALALPTLGAVLVDPVLSMVDTCYVGRLGALSLAAIGPSSAAFGFVFSTASSVLMVPTAVMISKARAKSNTVGVGRTLTFASALAAVLGIFLSWFFYVHCSVLLSVLGAPT-QALHLAIPYLRWRALSMPANLLLLVAAGACRGMKEPKVSLVNGFLIGGINMVLDPLLMFGLNLGTAGAAMATAAAQWATLERAVMQVGLLAYIRYFWKRREELGLGNPTSL-PTKKEMQEFIGASGTMFFRQLCNVGAWTLMASIASRMGVLEIAAHQLILSMWLVIAFVQDSLGVAGQVLVSQYLGMSRDASGTPNQKGEQSEAIIFQET-ARSVAKRVLTLSLGVGIVLASCSSVVVPLMLPLICHSAEVVKIVSQVFLMIMFAFPMCCLVWSWDALFYGASDFVYNAKTVAVASALGVAGTLCSLSRGWGVRGLWVSMTFVLFGVRLLAHTWRFNSPHGPFGAGQIT 1693 + R + W + E+D I LALPTLGAVL+DP LS+VDT +VG+LG ++LA++GP +A + +F+TAS + V TAV+I++ +A + GRTL A + LGIF + S L ++GA + + + L PYL WRA ++PAN+ LLVA GA RG+ + + NG ++G +N+VLDP+LMF NLG AGAAMATA AQW +G L+YI +R+E GL + P ++QEF+ A M FR LCNVGAWTLMASIA+RMGV+EIAAHQLILSMWLVIAFVQD++G AGQVLVSQ LG G AI + AR++AKRV++ S +G+ L+ +V+P ++PL C S EV+ + S V +++ FP+CC+VW+WD+++YGASDF YNAK +AV+S++ V+ TL SL WG+ GLW SM FV FG+R++AH RFNS HGPFG ++ Sbjct: 191 ILRSLKENWARLTRVQEYDGQIWELALPTLGAVLIDPCLSLVDTMFVGKLGHVALASMGPCTALYNMIFATASCMFSVSTAVLIARYKALGDGQATGRTLFTAITSSVALGIFFTVLMASRPSQALRLMGASSPEMIRLGAPYLLWRATALPANMFLLVAGGAFRGIGNARENFTNGLVVGLVNLVLDPVLMFSCNLGVAGAAMATAIAQW---------IGALSYIFKMTRRKEAFGLNLGWKIIPGMADVQEFLTAGTAMLFRSLCNVGAWTLMASIATRMGVVEIAAHQLILSMWLVIAFVQDAVGAAGQVLVSQQLG----------NPGSSRHAIRRGKARARAIAKRVISFSAIIGVALSLIGQIVLPSLIPLFCSSPEVIALTSSVLPIVLLGFPVCCVVWTWDSVYYGASDFKYNAKVIAVSSSIAVSLTLASLHYEWGLLGLWSSMVFVYFGLRVVAHYRRFNSEHGPFGKSTLS 655
BLAST of mRNA_C-tenellus_contig1043.3.4 vs. uniprot
Match: A0A5J4Z3T9_PORPP (Protein DETOXIFICATION 44, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3T9_PORPP) HSP 1 Score: 242 bits (618), Expect = 2.280e-69 Identity = 169/475 (35.58%), Postives = 264/475 (55.58%), Query Frame = 2 Query: 272 FWQGAWKRNEHDKAIIALALPTLGAVLVDPVLSMVDTCYVGRLGALSLAAIGPSSAAFGFVFSTASSVLMVPTAVMISKARAKSNTVGVGRTLTFASALAAVLGIFLSWFFYVHCSVLLSVLGAPTQALHLAIPYLRWRALSMPANLLLLVAAGACRGMKEPKVSLVNGFLIGGINMVLDPLLMFG-LNLGTAGAAMATAAAQWATLERAVMQVGLLAYIRYFWKRREELGL--GNPTSLPTKK-EMQEFIGASGTMFFRQLCNVGAWTLMASIASRMGVLEIAAHQLILSMWLVIAFVQDSLGVAGQVLVSQYLGMSRDASGTPNQKGEQSEAIIFQETARSVAKRVLTLSLGVGIVLASCSSVVVPLMLPLICHSAEVVKIVSQVFLMIMFAFPMCCLVWSWDALFYGASDFVYNAKTVAVASALG--VAGTLCSLSRGWGVRGLWVSMTFVLFGVRLLAHTWR-FNSPHGPF 1675 FWQ +W+++ D + +LA+P LG++LVDP L++VDT VGRLG LAA+GP SA F+F+T + + A+++++A AK + GV R + ++++A +G L+ +V LLS +GA + A+ Y R R +++P LLL GA RG+++ LIG IN+VLDPLLMFG L +G GAA+AT+ AQ G +AY+ +R + GL P K+ E+ F+ +S + RQ+ N+G WT M+S+ +RMG++EIA+HQL+LS +L + F+ + L VAGQ+L +++L D S TAR+ R++ +SL + +A + +P L ++ A+V V M++ FPM CLVW +D+ Y ASDF +NA ++ VA A +A L S+ +W + F +RL+AH +R + S PF Sbjct: 31 FWQLSWRKSPFDDEVWSLAVPALGSLLVDPFLTLVDTACVGRLGLRPLAAMGPCSALTSFIFATFQPMYTISPALLVTRASAKKDLPGVARAVRLSASVALGMGTILALLSFVFARPLLSAMGATELIIGDALAYFRARIVALPFMFLLLCLDGAHRGVQDTVTPFRISMLIGIINLVLDPLLMFGPLKMGLRGAAIATSIAQ---------ICGAIAYVVDVLRRPDTFGLHAAQTAQAPIKRSEVMAFMQSSWALLVRQVSNLGVWTFMSSLITRMGLIEIASHQLVLSTFLFLTFLHEPLSVAGQILCTKHL--VEDTS---------------HATARAFIPRLVAISLALSSAIAVVAQFAMPKWLQIMATDAQVQLKALSVMRMLLCVFPMFCLVWLYDSFSYAASDFSFNALSLLVAGACTAPIALMLARSSQYASAHAMWFVLFCPYFTIRLVAHVFRTYISRSSPF 479
BLAST of mRNA_C-tenellus_contig1043.3.4 vs. uniprot
Match: D7CWB4_TRURR (MATE efflux family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) TaxID=649638 RepID=D7CWB4_TRURR) HSP 1 Score: 227 bits (578), Expect = 3.770e-64 Identity = 159/453 (35.10%), Postives = 243/453 (53.64%), Query Frame = 2 Query: 296 NEHDKAIIALALPTLGAVLVDPVLSMVDTCYVGRLGALSLAAIGPSSAAFGFVFSTASSVLMVPTAVMISKARAKSNTVGVGRTLTFASALAAVLGIFLSWFFYVHCSVLLSVLGAPTQALHLAIPYLRWRALSMPANLLLLVAAGACRGMKEPKVSLVNGFLIGGINMVLDPLLMFGLNLGTAGAAMATAAAQWATLERAVMQVGLLAYIRYFWKRREELGLGNPTSLPTKKEMQEFIGASGTMFFRQLCNVGAWTLMASIASRMGVLEIAAHQLILSMWLVIAFVQDSLGVAGQVLVSQYLGMSRDASGTPNQKGEQSEAIIFQETARSVAKRVLTLSLGVGIVLASCSSVVVPLMLPLICHSAEVVKIVSQVFLMIMFAFPMCCLVWSWDALFYGASDFVYNAKTVAVASALGVAGTLCSLSRGWGVRGLWVSMTFVLFGVRLLAHTWRF 1654 N +D+ I+ALALP LG + DP++S+VDT +VGRLG++ LAA+G ++A F F + L T M++++ + + GR + A LA + G F + + LL ++GA + + A+ YLR RAL+ PA LL+ GA RG ++ + + + +N+ LDPL +FG G AGAA AT AQWA G L ++ + RR LG+ +LP E++ F+ + R + TL ++A+R+GVLE+AAHQ+ +WL +A V D+L VA Q LV++Y G +G P + AR+VA R+L GVG+VLA+ ++ P++ L VV+ V VF + P+ LV+ WD + G DF Y A + V++A G L L GWG+ G+W + L GVRL+ +WR+ Sbjct: 8 NPYDRDILALALPALGTLAADPLVSLVDTAFVGRLGSVPLAALGVNTALFSLAF-VVFNFLAYGTTPMVARSLGRGDREAAGRAVVQALTLALLAGGLAVAFLQLFAAPLLRLMGAGEELVGPALGYLRVRALAGPALLLITAGNGAFRGYQDTRTPFLLTLGLNLVNVALDPLFIFGFGWGLAGAAWATVVAQWA---------GALGFVWVLFARRRALGIS--VALPRFAELRPFVRVGWELLVRTAALLSTLTLATAVATRVGVLEVAAHQVAAQLWLFLALVVDALAVAAQALVARYRG-----AGQPLR-------------ARAVADRLLAWGFGVGLVLAAGFALFAPVLPRLFTDDPAVVRAVLTVFPFVALMQPLNALVFVWDGVLMGLEDFRYLALAMLVSAACGALVLLLVLPLGWGLTGVWWGVA-TLMGVRLVTLSWRY 429
BLAST of mRNA_C-tenellus_contig1043.3.4 vs. uniprot
Match: A0A6C1NP02_9BACT (MATE family efflux transporter n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6C1NP02_9BACT) HSP 1 Score: 218 bits (554), Expect = 1.450e-60 Identity = 159/457 (34.79%), Postives = 235/457 (51.42%), Query Frame = 2 Query: 305 DKAIIALALPTLGAVLVDPVLSMVDTCYVGRLGALSLAAIGPSSAAFGFVFSTASSVLMVPTAVMISKARAKSNTVGVGRTLTFASALAAVLGIFLSWFFYVHCSVLLSVLGAPTQALHLAIPYLRWRALSMPANLLLLVAAGACRGMKEPKVSLVNGFLIGGINMVLDPLLMFGLNLGTAGAAMATAAAQWATLERAVMQVGLLAYIRYFWKRREELGLGNPTSLPTKKEMQEFIGASGTMFFRQLCNVGAWTLMASIASRMGVLEIAAHQLILSMWLVIAFVQDSLGVAGQVLVSQYLGMSRDASGTPNQKGEQSEAIIFQETARSVAKRVLTLSLGVGIVLASCSSVVVPLMLPLICHSAEVVKIVSQVFLMIMFAFPMCCLVWSWDALFYGASDFVYNAKTVAVASALGVAGTLCS-LSRGWGVRGLWVSMTFVLFGVRLLAHTWRFNSPHGP 1672 D+ I ALA+P LGA+ DP++SMVDT +VGRLG + LAA+G +++ F F + L T +++A + + VGR + A LA G+ + +LSV+GA + A+ YLR RAL+ PA LL++ G RG+++ + L + +N+VLDP+L+FGL G GAA AT AQWA G LA++R + R + LG P E+ F+ G + R +G TL ++A+R+G ++AAHQ+ + +W+++A V DSL VA Q +V +Y G G A++ R V R+L GVG+VL V P + + + V+ V ++F P+ LV+ WD +F GA DF Y A + V SAL AG L L GWG+ G+W +T L GVR R+ GP Sbjct: 13 DREITALAIPALGALAADPLVSMVDTAFVGRLGTVPLAALGVNASVFAMTF-VVFNFLAYGTTPRVARALGRGDRGEVGRVVLQALVLAVAAGVVATALLLALAGPILSVMGATGELREPAMAYLRIRALAGPAVLLIMAGHGVFRGLQDTRTPLRITLALNVVNLVLDPILIFGLGWGLEGAAWATVVAQWA---------GALAFVRLIFGPRRAM-LGESPRWPRPAELLPFLRVGGELLLRTGALIGTLTLATAVATRVGTAQVAAHQVAVQLWMLLALVVDSLAVAAQAMVGKYRGADESREGV---------AVL-----REVTNRLLLWGAGVGVVLLGLFWVAAPWLPRIFTDDPLTLLAVAAVLPFVVFMQPLNALVFVWDGIFMGAEDFRYLAVQM-VLSALAAAGILLLVLPMGWGLAGVWWGIT-ALMGVRAATLAVRYWGRRGP 442
BLAST of mRNA_C-tenellus_contig1043.3.4 vs. uniprot
Match: A0A651HEU5_9BACT (MATE family efflux transporter n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A651HEU5_9BACT) HSP 1 Score: 217 bits (552), Expect = 2.550e-60 Identity = 153/465 (32.90%), Postives = 243/465 (52.26%), Query Frame = 2 Query: 305 DKAIIALALPTLGAVLVDPVLSMVDTCYVGRLGALSLAAIGPSSAAFGFVFSTASSVLMVPTAVMISKARAKSNTVGVGRTLTFASALAAVLGIFLSWFFYVHCSVLLSVLGAPTQALHLAIPYLRWRALSMPANLLLLVAAGACRGMKEPKVSLVNGFLIGGINMVLDPLLMFGLNLGTAGAAMATAAAQWATLERAVMQVGLLAYIRYFWKRREELGLGNPTSLPTKKEMQEFIGASGTMFFRQLCNVGAWTLMASIASRMGVLEIAAHQLILSMWLVIAFVQDSLGVAGQVLVSQYLGMSRDASGTPNQKGEQSEAIIFQETARSVAKRVLTLSLGVGIVLASCSSVVVPLMLPLICHSAEVVKIVSQVFLMIMFAFPMCCLVWSWDALFYGASDFVYNAKTVAVASALGVAGTLCSLSRGWGVRGLWVSMTFVLFGVRLLAHTWRFNSPHGPFGAGQITGE 1699 D+ I+ALALP LGA+ DP++++VDT YVGRLG + LAA+G ++A F F + L T +++A + + GR + A LA V G+ + + +L+ ++GA + A+ YLR RAL+ PA LL++ G RG ++ + + +N+VLDP+L+FGL G GAA AT AQW VG + ++ R +L LG + LP E+ F+ G + R L +G TL A++A+R+G E+A HQ+ + +W+++A V D++ VA Q LV ++ G R R V R+L L +G+VL ++ PL+ L ++ V+++ +++ P+ LV+ WD +F GA DF + A + ++ A L L GWG++G+W + L GVRLL + R+ HGP G+ TGE Sbjct: 7 DREIVALALPALGALAADPLVTLVDTAYVGRLGTVPLAALGVNAALFSLAF-VVFNFLAYGTTPRVARAVGRGDRTEAGRVVLQALTLAVVTGVAATTILLMGGDLLVRLMGATGELRGPALDYLRIRALAGPAVLLIMAGHGIFRGFQDTRTPFRVTLGLNVVNLVLDPILIFGLGWGLTGAAWATVVAQW---------VGAVGFLWLILGPRRDL-LGGVSRLPRPAELLPFLRVGGELLIRTLALIGTLTLAAAVATRVGTAEVAGHQVAVQLWILLALVVDAVAVAAQALVGRFRGEGR------------------VHLLRRVTDRLLLWGLAMGLVLTLLFLLLAPLLPRLFTDDGATLREVARILPFVIWMQPLNALVFVWDGIFMGAEDFRFLAGQMLLSGAAAAMVLLLVLPMGWGLQGVWWGIV-TLMGVRLLTLSIRYWGRHGP---GRTTGE 438
BLAST of mRNA_C-tenellus_contig1043.3.4 vs. uniprot
Match: A0A7Y2YUF7_9BACT (MATE family efflux transporter n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2YUF7_9BACT) HSP 1 Score: 206 bits (523), Expect = 3.690e-56 Identity = 151/432 (34.95%), Postives = 232/432 (53.70%), Query Frame = 2 Query: 305 DKAIIALALPTLGAVLVDPVLSMVDTCYVGRLGALSLAAIGPSSAAFGFVFSTASSVLMVPTAVMISKARAKSNTVGVGRTLTFASALAAVLGIFLSWFFYVHCSVLLSVLGAPTQALHLAIPYLRWRALSMPANLLLLVAAGACRGMKEPKVSLVNGFLIGGINMVLDPLLMFGLNLGTAGAAMATAAAQWATLERAVMQVGLLAYIRYFW-KRREELGLGNPTSLPTKKEMQEFIGASGTMFFRQLCNVGAWTLMASIASRMGVLEIAAHQLILSMWLVIAFVQDSLGVAGQVLVSQYLGMSRDASGTPNQKGEQSEAIIFQETARSVAKRVLTLSLGVGIVLASCSSVVVPLMLPLICHSAEVVKIVSQVFLMIMFAFPMCCLVWSWDALFYGASDFVYNAKTVAVASALGVAGTLCSLSRGWGVRGLW 1597 D+ I+ LALP LGA+ DP++SMVDT +VGRLG + LAA+G +++ F F A + L T ++++A + + VG G + A LAAV+G + + +++++GA + A+ YLR RAL+ PA L + GA RG ++ + L+ + IN+VLDPL +FG G GAA+AT AQW VG ++R RR ELG+ LP E++ F+ G + FR L +G TL ++A+R+G L++AAHQ+ +WL++A V DSL VA Q +V+ Y G +G P AR + R+L L G L ++ P++ L A V++ V+ +F I+F P+ +V+ WD +F GA F + A +A A+A A + L GWG+ G+W Sbjct: 10 DRDIVRLALPALGALAADPLVSMVDTIFVGRLGIVPLAALGVNTSIFAMAF-VAFNFLAYGTTPLVARAVGREDRVGAGDVVMQAFLLAAVVGGVATLLLELLAVPIVNLMGAGPELQEPALSYLRIRALAGPAVLFVTAGHGAFRGYQDTRTPLLVTLGLNLINVVLDPLFIFGFGWGLEGAALATLIAQW---------VGAAWFLRLLLGSRRRELGIRR--RLPALAELRPFLRIGGELVFRTLALIGTLTLATAVATRVGTLQVAAHQVATQIWLLLAMVVDSLAVAAQAMVAGYRG-----AGDP-------------VMARRASNRLLGWGLLSGCGLGGLFFLLAPVLPRLFTDEAAVLEAVAGIFPFIVFMQPLNAIVFVWDGVFMGAERFRFLAGQMAFAAACAAAVLVLVLPMGWGLSGVW 411
BLAST of mRNA_C-tenellus_contig1043.3.4 vs. uniprot
Match: A0A2T2TG51_9BACT (MATE family efflux transporter n=1 Tax=Bacteroidetes bacterium QS_8_68_15 TaxID=1919109 RepID=A0A2T2TG51_9BACT) HSP 1 Score: 205 bits (521), Expect = 8.660e-56 Identity = 159/473 (33.62%), Postives = 234/473 (49.47%), Query Frame = 2 Query: 296 NEHDKAIIALALPTLGAVLVDPVLSMVDTCYVGRLGALSLAAIGPSSAAFGFVFSTASSVLMVPTAVMISKARAKSNTVGVGRTLTFASALAAVLGIFLSWFFYVHCSVLLSVLGAPTQALHLAIPYLRWRALSMPANLLLLVAAGACRGMKEPKVSLVNGFLIGGINMVLDPLLMFGLNLGTAGAAMATAAAQWATLERAVMQVGLLAYIRYFWKRREELGLGNPTSLPTKKEMQEFIGASGTMFFRQLCNVGAWTLMASIASRMGVLEIAAHQLILSMWLVIAFVQDSLGVAGQVLVSQYLGMSRDASGTPNQKGEQSEAIIFQETARSVAKRVLTLSLGVGIVLASCSSVVVPLMLPLICHSAEVVKIVSQVFLMIMFAFPMCCLVWSWDALFYGASDFVYNAKTVAVASALGVAGTLCSL-SRGWGVRGLWVSMTFVLFGVRLLAHTWRFNSPHGPFGAGQITGEDKLG 1711 +D+ I+ALA+P LG + V P++S+VDT +VGRLG + LAA+G +++ F F + L T ++ A + + GRT+ A LAA LG+ + ++L +GA L A+ YLR RAL+ PA LL+L GA RG ++ + L + +N LDPLL+FG G GAA ATA AQW G L ++ RR E LG P + + F+ T+ R L G L ++A+R+G E+AAHQ+ W +A V D+L VA Q LV++YLG AR+V++R+L + L VG VL ++ P + L A +++ V + P+ LV+ D +F G DF Y AK + VASA G A L + GWG+ G+W + L +RLL R+ P G F A ++ +D G Sbjct: 6 TRYDRDILALAVPALGTLAVGPLVSLVDTAFVGRLGRVPLAALGVNASVFSLAF-IVFNFLAYATTPRVAGAYGRGDREEAGRTVVQALTLAAGLGLLATTVLEAAAPLILRAMGATGDLLTPALRYLRIRALAGPAVLLVLAGHGAFRGYQDTRTPLYVSLALNAVNAALDPLLIFGFGWGLTGAATATAVAQW---------TGALGFLGLLLVRRRE-ALGIVLEWPRLRALLPFMRVGWTLASRTLALTGTMALATAVAARVGTAEVAAHQVAAQCWSFLALVVDALAVAAQALVARYLGADEPRK------------------ARAVSRRLLVMGLAVGAVLGGAVWLLRPALPALFTDDAATTRLLLAVAPFVALMQPLNALVFVGDGIFMGLEDFSYLAKAM-VASAAGAAAVLVLVVPMGWGLAGVWWGLV-ALMALRLLTLGARYVQP-GLFAAAEVEPDDPAG 446
BLAST of mRNA_C-tenellus_contig1043.3.4 vs. uniprot
Match: A0A4Y6PVI4_9DELT (MATE family efflux transporter n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PVI4_9DELT) HSP 1 Score: 202 bits (515), Expect = 5.830e-55 Identity = 148/443 (33.41%), Postives = 235/443 (53.05%), Query Frame = 2 Query: 293 RNEHDKAIIALALPTLGAVLVDPVLSMVDTCYVGRLGALSLAAIGPSSAAFGFVFSTASSVLMVPTAVMISKARAKSNTVGVGRTLTFASALAAVLGIFLSWFFYVHCSVLLSVLGAPTQALHLAIPYLRWRALSMPANLLLLVAAGACRGMKEPKVSLVNGFLIGGINMVLDPLLMFGLNLGTAGAAMATAAAQWATLERAVMQVGLLAYIRYFWK-RREELGLGNPTSLPTKKEMQEFIGASGTMFFRQLCNVGAWTLMASIASRMGVLEIAAHQLILSMWLVIAFVQDSLGVAGQVLVSQYLGMSRDASGTPNQKGEQSEAIIFQETARSVAKRVLTLSLGVGIVLASCSSVVVPLMLPLICHSAEVVKIVSQVFLMIMFAFPMCCLVWSWDALFYGASDFVYNAKTVAVASALGVAGTLCSLSRGWGVRGLWVSMTFVL 1618 R++HD I+ LA+P LG++ VDP++S+VDT +VG+ L A+G +++ F F + L T + A + + G+ + A LA G + +L+++GA + A+ YLR RA + PA LLL V GA RG ++ + ++V + +N+VLDP+L+FGL G AGAA AT AQW +G L ++ K RREELG+ PT ++M F+ ++ R VG TL ++A+R+GV+ +AAHQ+ +W +A V D+L VA Q LV+++LG G+ EA R V+ R+L LGVG VLA + + P++ L A+ V V +F+ + P+ +V+ WD ++ GA F + AK + V++A VA L + GWG+ G+W +T ++ Sbjct: 7 RHKHDPEILRLAVPALGSLAVDPLVSLVDTAFVGQXXXXPLGALGINASLFAMTF-VIFNFLAYGTTPRVGNALGRGDRKAAGQVVIQAFTLALAAGALALALLQIFAGPILTLMGATGELREPAMTYLRIRAFAGPAVLLLNVGHGAFRGYQDTRTAMVVTIALNLVNLVLDPILIFGLGWGIAGAATATVIAQW---------LGALTFVWLLLKSRREELGI--ELVRPTLEQMLPFLRIGSSLLLRTGALVGTMTLATAVAARVGVVAVAAHQVANQLWGFLALVVDALAVAAQALVAKHLG-----------SGDVDEA-------RDVSDRLLQWGLGVGAVLALGFAALRPVLPGLFTDEAQTVARVMDIFIFVAVLQPINGVVFVWDGIYMGAEKFGFLAKAMVVSAAGAVAVLLLTRPMGWGLEGVWWGITALM 419 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1043.3.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1043.3.4 >prot_C-tenellus_contig1043.3.4 ID=prot_C-tenellus_contig1043.3.4|Name=mRNA_C-tenellus_contig1043.3.4|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=475bp MVDTCYVGRLGALSLAAIGPSSAAFGFVFSTASSVLMVPTAVMISKARAKback to top mRNA from alignment at C-tenellus_contig1043:2795..12870+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1043.3.4 ID=mRNA_C-tenellus_contig1043.3.4|Name=mRNA_C-tenellus_contig1043.3.4|organism=Choristocarpus tenellus KU2346|type=mRNA|length=10076bp|location=Sequence derived from alignment at C-tenellus_contig1043:2795..12870+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1043:2795..12870+ >mRNA_C-tenellus_contig1043.3.4 ID=mRNA_C-tenellus_contig1043.3.4|Name=mRNA_C-tenellus_contig1043.3.4|organism=Choristocarpus tenellus KU2346|type=CDS|length=1425bp|location=Sequence derived from alignment at C-tenellus_contig1043:2795..12870+ (Choristocarpus tenellus KU2346)back to top |