mRNA_C-tenellus_contig10426.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10426.1.1
Unique NamemRNA_C-tenellus_contig10426.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10426.1.1 vs. uniprot
Match: D8LIP1_ECTSI (Phosphoribosylformylglycinamidine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP1_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 1.410e-35
Identity = 72/112 (64.29%), Postives = 84/112 (75.00%), Query Frame = 1
Query:    1 ARELCPLSGIESILTEHCFNVEVEKNRPLTPGQYATLLWLLRETYEPEQTSTESFLDRAAAVVAAGEGGGKGGKHTSLLEVGPRLSFESAVSSNAKSICRASGLEGVSRLEV 336
            A+  CP +G+ESI TEHCFNVEV+K RP+  GQ   L WLLRET+EPE+TS  SFL        +GE GG   K   L+EVGPRLSFESAVSSNAKS+CRASG+EGV+RLEV
Sbjct:  114 AKTACPEAGVESIATEHCFNVEVDKARPMDAGQKDALQWLLRETFEPEKTSESSFL--------SGEQGGDSSKSVLLVEVGPRLSFESAVSSNAKSVCRASGIEGVTRLEV 217          
BLAST of mRNA_C-tenellus_contig10426.1.1 vs. uniprot
Match: A0A835ZAY9_9STRA (Phosphoribosylformylglycinamidine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAY9_9STRA)

HSP 1 Score: 104 bits (260), Expect = 7.700e-24
Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = 1
Query:    1 ARELCPLSGIESILTEHCFNVEVEKNRPLTPGQYATLLWLLRETYEPEQTSTESFLDRAAAVVAAGEGGGKGGKHTSLLEVGPRLSFESAVSSNAKSICRASGLEGVSRLEV 336
            A+   P +GI S+ TEHCFNVEV +  PL+  Q ATL WLL ET+E ++T+  SFL       A  +G       +S++EVGPRLSFESA+SSNA++ICRASGL  VSR+EV
Sbjct:   34 AQAALPAAGITSLDTEHCFNVEVTE--PLSAAQTATLTWLLSETFEADKTAPTSFL-------APSDGSDATASSSSIVEVGPRLSFESALSSNARAICRASGLACVSRVEV 136          
BLAST of mRNA_C-tenellus_contig10426.1.1 vs. uniprot
Match: I0YZ97_COCSC (Phosphoribosylformylglycinamidine synthase n=2 Tax=Coccomyxa TaxID=41891 RepID=I0YZ97_COCSC)

HSP 1 Score: 91.7 bits (226), Expect = 2.990e-19
Identity = 58/105 (55.24%), Postives = 69/105 (65.71%), Query Frame = 1
Query:   22 SGIESILTEHCFNVEVEKNRPLTPGQYATLLWLLRETYEPEQTSTESFLDRAAAVVAAGEGGGKGGKHTSLLEVGPRLSFESAVSSNAKSICRASGLEGVSRLEV 336
            S IESI TE CFNV +++  PLT  Q ATL WLLRETYEPE  + +S L          EG G      ++LEVGPR+SF+SA S+NA SICR+ GL  VSRLEV
Sbjct:   68 SDIESIDTELCFNVALKE--PLTEDQAATLTWLLRETYEPELLTPDSRLQ---------EGNG------TVLEVGPRMSFQSAWSTNAVSICRSCGLNAVSRLEV 155          
BLAST of mRNA_C-tenellus_contig10426.1.1 vs. uniprot
Match: A0A4U6UFE5_SETVI (FGAR-AT_N domain-containing protein n=1 Tax=Setaria viridis TaxID=4556 RepID=A0A4U6UFE5_SETVI)

HSP 1 Score: 85.9 bits (211), Expect = 1.010e-18
Identity = 52/103 (50.49%), Postives = 65/103 (63.11%), Query Frame = 1
Query:   25 GIESILTEHCFNVEVEKNRPLTPGQYATLLWLLRETYEPEQTSTESFLDRAAAVVAAGEGGGKGGKHTSLLEVGPRLSFESAVSSNAKSICRASGLEGVSRLE 333
             I  I TE CFNVE+EK   LTP + ATL WLL ETYEPE+  T SFL          EG   G  ++ ++EVGPR++F +A S+NA SIC+A  L  V+RLE
Sbjct:   65 NIVGIRTEQCFNVELEK--ALTPEKLATLKWLLAETYEPEKLQTCSFL----------EGEVCGSPYSVIVEVGPRMAFSTAFSTNAVSICKALSLTEVARLE 155          
BLAST of mRNA_C-tenellus_contig10426.1.1 vs. uniprot
Match: A0A2M7EHT2_9BACT (Phosphoribosylformylglycinamidine synthase n=1 Tax=Nitrospirae bacterium CG01_land_8_20_14_3_00_44_22 TaxID=1974064 RepID=A0A2M7EHT2_9BACT)

HSP 1 Score: 89.0 bits (219), Expect = 2.640e-18
Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = 1
Query:   13 CPLSGIESILTEHCFNVEVEKNRPLTPGQYATLLWLLRETYEPEQTSTESFLDRAAAVVA---AGEGGGKGGKHTSLLEVGPRLSFESAVSSNAKSICRASGLEGVSRLE 333
            C  S I  I TEHCFN+E     PLT  +  TL WLL ET+EPE  S ESFL  +  +      G+GG +GG    + EVGPR++F +A S+NA SIC A GL+ ++R+E
Sbjct:   27 CVASDINDIETEHCFNIEA--TAPLTSKELNTLKWLLTETFEPENFSGESFLTLSTTLPPHPPLGKGGSEGGV---VFEVGPRMNFTTAWSTNAVSICHACGLKKITRIE 131          
BLAST of mRNA_C-tenellus_contig10426.1.1 vs. uniprot
Match: A0A7W0F5G7_9BACT (Phosphoribosylformylglycinamidine synthase (Fragment) n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A7W0F5G7_9BACT)

HSP 1 Score: 86.3 bits (212), Expect = 2.270e-17
Identity = 50/107 (46.73%), Postives = 66/107 (61.68%), Query Frame = 1
Query:   13 CPLSGIESILTEHCFNVEVEKNRPLTPGQYATLLWLLRETYEPEQTSTESFLDRAAAVVAAGEGGGKGGKHTSLLEVGPRLSFESAVSSNAKSICRASGLEGVSRLE 333
            C  S I  I TEHCFN+E     PLT  +   L WLL ET+EPE  S ESFL R ++ V          +H SL+EVGPR++F +A S+NA S+C A GL+ ++R+E
Sbjct:   27 CVASDINDIETEHCFNIEA--TAPLTSEELDILRWLLSETFEPENFSGESFLTRHSSPVT---------RH-SLVEVGPRMNFTTAWSTNAVSVCHACGLKKIARIE 121          
BLAST of mRNA_C-tenellus_contig10426.1.1 vs. uniprot
Match: A0A7Z1R540_9BACT (Phosphoribosylformylglycinamidine synthase n=1 Tax=Holophagae bacterium TaxID=2073116 RepID=A0A7Z1R540_9BACT)

HSP 1 Score: 85.9 bits (211), Expect = 3.160e-17
Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = 1
Query:   28 IESILTEHCFNVEVEKNRPLTPGQYATLLWLLRETYEPEQTSTESFLDRAAAVVAAGEGGGKGGKHTSLLEVGPRLSFESAVSSNAKSICRASGLEGVSRLE 333
            +E++ TEHCFN+E+   RPL+   +  L WLL ET+EPE+    SFLD AA  +               LEVGPR+SF +A S+NA ++CRA GL+ V R+E
Sbjct:   32 VEAVDTEHCFNIELA--RPLSAADHEVLRWLLAETFEPERCRPSSFLDPAAGAI---------------LEVGPRMSFTTAWSTNAVAVCRACGLDDVRRIE 116          
BLAST of mRNA_C-tenellus_contig10426.1.1 vs. uniprot
Match: A0A1Q3BQW2_CEPFO (Phosphoribosylformylglycinamidine synthase n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BQW2_CEPFO)

HSP 1 Score: 84.7 bits (208), Expect = 8.050e-17
Identity = 50/102 (49.02%), Postives = 64/102 (62.75%), Query Frame = 1
Query:   28 IESILTEHCFNVEVEKNRPLTPGQYATLLWLLRETYEPEQTSTESFLDRAAAVVAAGEGGGKGGKHTSLLEVGPRLSFESAVSSNAKSICRASGLEGVSRLE 333
            I  + TE CFNV +EK   ++  ++  L WLL ETYEPE   TESFL++            + G +T ++EVGPRLSF +A SSNA SICRA GL  V+RLE
Sbjct:  118 IVGLKTEQCFNVGIEKE--ISNEKFNVLKWLLSETYEPENLGTESFLEKKR----------QEGLNTVIVEVGPRLSFTTAWSSNAVSICRACGLTEVTRLE 207          
BLAST of mRNA_C-tenellus_contig10426.1.1 vs. uniprot
Match: K3XDU4_SETIT (Phosphoribosylformylglycinamidine synthase n=2 Tax=Setaria italica TaxID=4555 RepID=K3XDU4_SETIT)

HSP 1 Score: 84.0 bits (206), Expect = 1.500e-16
Identity = 51/103 (49.51%), Postives = 64/103 (62.14%), Query Frame = 1
Query:   25 GIESILTEHCFNVEVEKNRPLTPGQYATLLWLLRETYEPEQTSTESFLDRAAAVVAAGEGGGKGGKHTSLLEVGPRLSFESAVSSNAKSICRASGLEGVSRLE 333
             I  I TE CFNVE+EK   LTP + ATL WLL ETYEPE+  T  FL          EG   G  ++ ++EVGPR++F +A S+NA SIC+A  L  V+RLE
Sbjct:  105 NIVGIRTEQCFNVELEK--ALTPEKLATLKWLLAETYEPEKLQTCRFL----------EGEVCGSPYSVIVEVGPRMAFSTAFSTNAVSICKALSLTEVARLE 195          
BLAST of mRNA_C-tenellus_contig10426.1.1 vs. uniprot
Match: A0A7V5ZGY0_9BACT (Phosphoribosylformylglycinamidine synthase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V5ZGY0_9BACT)

HSP 1 Score: 83.2 bits (204), Expect = 2.780e-16
Identity = 46/103 (44.66%), Postives = 61/103 (59.22%), Query Frame = 1
Query:   25 GIESILTEHCFNVEVEKNRPLTPGQYATLLWLLRETYEPEQTSTESFLDRAAAVVAAGEGGGKGGKHTSLLEVGPRLSFESAVSSNAKSICRASGLEGVSRLE 333
             I  + TE+CFNV    +RPL P ++A L WLL ET+EPE+    SFLD A   +               +EVGPRLSF +A S+NA ++CR+ GLE V R+E
Sbjct:   31 AIADLATEYCFNVG--SSRPLAPDEHAVLHWLLAETFEPERCRPTSFLDDAEGTI---------------VEVGPRLSFTTAWSTNAVAVCRSCGLEAVERIE 116          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10426.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIP1_ECTSI1.410e-3564.29Phosphoribosylformylglycinamidine synthase n=1 Tax... [more]
A0A835ZAY9_9STRA7.700e-2453.57Phosphoribosylformylglycinamidine synthase n=1 Tax... [more]
I0YZ97_COCSC2.990e-1955.24Phosphoribosylformylglycinamidine synthase n=2 Tax... [more]
A0A4U6UFE5_SETVI1.010e-1850.49FGAR-AT_N domain-containing protein n=1 Tax=Setari... [more]
A0A2M7EHT2_9BACT2.640e-1847.27Phosphoribosylformylglycinamidine synthase n=1 Tax... [more]
A0A7W0F5G7_9BACT2.270e-1746.73Phosphoribosylformylglycinamidine synthase (Fragme... [more]
A0A7Z1R540_9BACT3.160e-1745.10Phosphoribosylformylglycinamidine synthase n=1 Tax... [more]
A0A1Q3BQW2_CEPFO8.050e-1749.02Phosphoribosylformylglycinamidine synthase n=1 Tax... [more]
K3XDU4_SETIT1.500e-1649.51Phosphoribosylformylglycinamidine synthase n=2 Tax... [more]
A0A7V5ZGY0_9BACT2.780e-1644.66Phosphoribosylformylglycinamidine synthase n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10426contigC-tenellus_contig10426:259..1028 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LIP1
PFAMsAIRS_C,GATase_5
Model size336
Max annot lvl2759|Eukaryota
KEGG rclassRC00010,RC01160
KEGG koko:K01952
KEGG ReactionR04463
KEGG Pathwayko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130
KEGG ModuleM00048
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004642,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009507,GO:0009532,GO:0009536,GO:0009555,GO:0009570,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048229,GO:0048856,GO:0055046,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576
Exons2
Evalue2.32e-36
EggNOG OGsCOG0046@1|root,KOG1907@2759|Eukaryota
EC6.3.5.3
Descriptionphosphoribosylformylglycinamidine synthase activity
Cds size336
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789130.9389215-CDS-C-tenellus_contig10426:258..5141680789130.9389215-CDS-C-tenellus_contig10426:258..514Choristocarpus tenellus KU2346CDSC-tenellus_contig10426 259..514 -
1680789130.9532163-CDS-C-tenellus_contig10426:948..10281680789130.9532163-CDS-C-tenellus_contig10426:948..1028Choristocarpus tenellus KU2346CDSC-tenellus_contig10426 949..1028 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10426.1.1prot_C-tenellus_contig10426.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10426 259..1028 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10426.1.1

>prot_C-tenellus_contig10426.1.1 ID=prot_C-tenellus_contig10426.1.1|Name=mRNA_C-tenellus_contig10426.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=112bp
ARELCPLSGIESILTEHCFNVEVEKNRPLTPGQYATLLWLLRETYEPEQT
STESFLDRAAAVVAAGEGGGKGGKHTSLLEVGPRLSFESAVSSNAKSICR
ASGLEGVSRLEV
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mRNA from alignment at C-tenellus_contig10426:259..1028-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10426.1.1 ID=mRNA_C-tenellus_contig10426.1.1|Name=mRNA_C-tenellus_contig10426.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=770bp|location=Sequence derived from alignment at C-tenellus_contig10426:259..1028- (Choristocarpus tenellus KU2346)
GCAAGGGAATTGTGCCCATTGAGTGGGATAGAATCTATCCTGACAGAGCA CTGCTTCAATGTCGAGGTTGAAAAGAACAGGTGGAGTAGTCAAATGTGTT GTCCTAGGTATCTACCTTCTTTGCATGCACGCATATGTCAACAGCACTAC AACTGTGCAGCTCTTGTACAATTGTGTAATCAGAACAGAAGAAAACCCAA TAGGCATCTACAAACACTTGCGCGGATCTTTATCCTAGATTTGTACCCCT ACTGGTAACTGTATTCTTTGTTTCATCTTTACATGAAACTAGAACATGTC TTTGCACCTTCCTATCCTATCCGAATTACAGATGTAGGGACCATAGGTAA GGCAAGGAAACAATGAGGATGCATGAATACACATGTGAAAGCAGTTACAT TCAAACCCTACGACTGACACTCGTTGAACCTGAAATTTGAGTTCCTCACT TCTCACTACTCACTCGTAAAACCTGGTTCGACTCCGAATACCTTGTCAAT CCCATCGAAACAAGACCCTTGACCCCTGGTCAATATGCCACGTTGCTGTG GCTCCTCCGAGAGACATACGAGCCCGAACAGACCTCAACAGAGTCCTTCC TCGACCGGGCTGCGGCAGTGGTGGCAGCTGGTGAGGGTGGTGGGAAAGGT GGCAAGCACACCTCCCTTTTGGAGGTGGGCCCTCGCCTGTCATTCGAGAG TGCGGTATCGTCCAATGCCAAGAGCATATGCCGTGCATCTGGGCTAGAGG GCGTGTCCCGCCTGGAGGTA
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Coding sequence (CDS) from alignment at C-tenellus_contig10426:259..1028-

>mRNA_C-tenellus_contig10426.1.1 ID=mRNA_C-tenellus_contig10426.1.1|Name=mRNA_C-tenellus_contig10426.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=336bp|location=Sequence derived from alignment at C-tenellus_contig10426:259..1028- (Choristocarpus tenellus KU2346)
GCAAGGGAATTGTGCCCATTGAGTGGGATAGAATCTATCCTGACAGAGCA
CTGCTTCAATGTCGAGGTTGAAAAGAACAGACCCTTGACCCCTGGTCAAT
ATGCCACGTTGCTGTGGCTCCTCCGAGAGACATACGAGCCCGAACAGACC
TCAACAGAGTCCTTCCTCGACCGGGCTGCGGCAGTGGTGGCAGCTGGTGA
GGGTGGTGGGAAAGGTGGCAAGCACACCTCCCTTTTGGAGGTGGGCCCTC
GCCTGTCATTCGAGAGTGCGGTATCGTCCAATGCCAAGAGCATATGCCGT
GCATCTGGGCTAGAGGGCGTGTCCCGCCTGGAGGTA
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