mRNA_C-tenellus_contig10424.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10424.2.1 vs. uniprot
Match: D8LNH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNH4_ECTSI) HSP 1 Score: 101 bits (251), Expect = 2.660e-22 Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 1 Query: 67 SMYAMSPAERARYHKAFSKLDKGARTGYLGTKEAAKVLAKSGLEKEKLGKVWSLADIDKDGALSRDEFAVAMHITTCAIIKHLPVPDHLPTTLGGRSRGVPNSKVARQE 393 S Y MS + ARY KAF+KL KG + LG KEAA VLAKSGL K LG++W+++D+D+DGALSR EF++AMH+ +C+ K LPVP LP +LG +P +V +E Sbjct: 470 SEYRMSDQDAARYDKAFNKLVKG-KGVTLGGKEAAVVLAKSGLGKRDLGRLWAMSDVDRDGALSRMEFSIAMHLVSCSAKKGLPVPRALPESLGAL---LPQPEVQSEE 574
BLAST of mRNA_C-tenellus_contig10424.2.1 vs. uniprot
Match: A0A6H5L1M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1M4_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 5.960e-21 Identity = 53/94 (56.38%), Postives = 68/94 (72.34%), Query Frame = 1 Query: 67 SMYAMSPAERARYHKAFSKLDKGARTGYLGTKEAAKVLAKSGLEKEKLGKVWSLADIDKDGALSRDEFAVAMHITTCAIIKHLPVPDHLPTTLG 348 S Y MS + ARY KAF KL KG + LG K+AA VLAKSGL K+ LG +W ++D+D+DGALSR EF++AMH+ +C+ K LPVP LP +LG Sbjct: 1146 SEYRMSDQDAARYGKAFDKLVKG-KGVTLGGKKAAVVLAKSGLRKKDLGHLWVMSDVDRDGALSRMEFSIAMHLASCSAKKGLPVPRALPESLG 1238
BLAST of mRNA_C-tenellus_contig10424.2.1 vs. uniprot
Match: UPI0006C94532 (epidermal growth factor receptor substrate 15-like 1 n=1 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI0006C94532) HSP 1 Score: 76.3 bits (186), Expect = 1.410e-13 Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 61 VDSMYAMSPAERARYHKAFSKLDKGARTGYLGTKEAAKVLAKSGLEKEKLGKVWSLADIDKDGALSRDEFAVAMHITTCAIIKHLPVPDHLPTTLGGRSR 360 + S + ++PAER +Y F L G GY+ + +L S L E LGK+W LAD+D+DG L+R EF VAMH+ A+ KH P+P+ LP L +R Sbjct: 108 LSSFWTITPAEREKYQLLFQNL--GPENGYVSGNKVKGILMDSKLPLESLGKIWDLADMDRDGKLNRHEFFVAMHLVCKAVQKH-PIPNVLPIELMDSNR 204
BLAST of mRNA_C-tenellus_contig10424.2.1 vs. uniprot
Match: G2QNG3_MYCTT (Uncharacterized protein n=1 Tax=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) TaxID=573729 RepID=G2QNG3_MYCTT) HSP 1 Score: 76.3 bits (186), Expect = 1.480e-13 Identity = 45/113 (39.82%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 52 GDEVDSMYAMSPAERARYHKAFSKLDKGARTGYLGTKEAAKVLAKSGLEKEKLGKVWSLADIDKDGALSRDEFAVAMHITTCAIIKHLPVPDHLPTTLGGRSRGVPNSKVARQ 390 G + + +SPA++AR+ + + +LDKG R GY+ +EA ++S L ++ L ++W LADI+ +G LSRDEFAVAM++ K P+P LP L VP S A+Q Sbjct: 284 GPQTTGEWLISPADKARFDQLYDELDKGKR-GYITGEEAVPFFSQSNLSEDILAQIWDLADINSEGRLSRDEFAVAMYLIRQQRTKSAPLPATLPPNL------VPPSMRAQQ 389
BLAST of mRNA_C-tenellus_contig10424.2.1 vs. uniprot
Match: W7U4B0_9STRA (Uba ts-n domain containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4B0_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.900e-13 Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 79 MSPAERARYHKAFSKLDKGARTGYLGTKEAAKVLAKSGLEKEKLGKVWSLADIDKDGALSRDEFAVAMHITTCAIIKHLPVPDHLPTTL 345 MS +RARY F D G++ +A ++ ++SGL++ LG+VW LAD DKD LS EFAVAMH+ C + LPVP+ LP +L Sbjct: 1 MSSEDRARYLNHFGPCDVNG-DGFVDGPQAVELFSRSGLDRSVLGRVWDLADADKDSRLSPGEFAVAMHLIVCISKRGLPVPERLPPSL 88
BLAST of mRNA_C-tenellus_contig10424.2.1 vs. uniprot
Match: A0A1B6F3A0_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6F3A0_9HEMI) HSP 1 Score: 69.3 bits (168), Expect = 9.520e-13 Identity = 40/91 (43.96%), Postives = 54/91 (59.34%), Query Frame = 1 Query: 73 YAMSPAERARYHKAFSKLDKGARTGYLGTKEAAKVLAKSGLEKEKLGKVWSLADIDKDGALSRDEFAVAMHITTCAIIKHLPVPDHLPTTL 345 +++ E+ RY K F L G+L + KVL S L + LGK+W LADIDKDG L+R+EF VAMH+ A+ KH +P+ LP L Sbjct: 7 WSIKAVEKERYLKLFDSLQPS--NGFLSGDKVKKVLMDSKLPLKTLGKIWDLADIDKDGMLNRNEFIVAMHLVYKALEKHA-IPNTLPPEL 94
BLAST of mRNA_C-tenellus_contig10424.2.1 vs. uniprot
Match: A0A182EAD1_ONCOC (Uncharacterized protein n=4 Tax=Onchocerca TaxID=6281 RepID=A0A182EAD1_ONCOC) HSP 1 Score: 73.2 bits (178), Expect = 1.660e-12 Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 1 Query: 61 VDSMYAMSPAERARYHKAFSKLDKGARTGY-------LGTKE-AAKVLAKSGLEKEKLGKVWSLADIDKDGALSRDEFAVAMHITTCAIIKHLPVPDHLP 336 VDS+Y MS ++A Y K F+ L K TGY G E + +SGL++EKL K+WSL+D+++DG L +EF+ AMH+ I ++P+PD +P Sbjct: 207 VDSLYGMSEEQKAYYTKCFNHLMKKT-TGYSDINGAICGANEHVVEFFKRSGLDREKLSKIWSLSDVNEDGYLDLNEFSAAMHLIVLHIKGYIPIPDVIP 305
BLAST of mRNA_C-tenellus_contig10424.2.1 vs. uniprot
Match: S4RTV0_PETMA (Epidermal growth factor receptor pathway substrate 15 like 1 n=7 Tax=Petromyzon marinus TaxID=7757 RepID=S4RTV0_PETMA) HSP 1 Score: 73.2 bits (178), Expect = 1.720e-12 Identity = 45/106 (42.45%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 28 GSTSTGDSGDEVDSMYAMSPAERARYHKAFSKLDKGARTGYLGTKEAAKVLAKSGLEKEKLGKVWSLADIDKDGALSRDEFAVAMHITTCAIIKHLPVPDHLPTTL 345 GS G S ++ + + P E+ ++ F L G G L ++ VL S L E LGKVW L+DIDKDG L RDEFAVAMH+ A+ K PVP +P L Sbjct: 107 GSPQLGSSAQNPEAFWVVKPDEKTKFDGIFDSL--GPANGLLSGEKVKPVLINSNLPMEVLGKVWDLSDIDKDGHLDRDEFAVAMHLVYRALDKE-PVPSVIPPKL 209
BLAST of mRNA_C-tenellus_contig10424.2.1 vs. uniprot
Match: UPI001B88D9A1 (LOW QUALITY PROTEIN: intersectin-1-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88D9A1) HSP 1 Score: 72.8 bits (177), Expect = 2.320e-12 Identity = 40/84 (47.62%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 94 RARYHKAFSKLDKGARTGYLGTKEAAKVLAKSGLEKEKLGKVWSLADIDKDGALSRDEFAVAMHITTCAIIKHLPVPDHLPTTL 345 R RY+ F+ DK R+G+L ++A K L +S L+K+ L K+W LAD+DKDG LS DEFA+AMH+ A K + +P LP L Sbjct: 10 RRRYNSIFNSYDKS-RSGHLSGEDARKALTRSDLDKDTLRKIWELADVDKDGRLSSDEFAIAMHLIERAQ-KGIALPTSLPPGL 91
BLAST of mRNA_C-tenellus_contig10424.2.1 vs. uniprot
Match: UPI00057A9593 (uncharacterized protein LOC105118166 n=1 Tax=Populus euphratica TaxID=75702 RepID=UPI00057A9593) HSP 1 Score: 72.8 bits (177), Expect = 2.330e-12 Identity = 44/106 (41.51%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 67 SMYAMSPAERARYHKAFSKLDKGARTGYLGTKEAAKVLAKSGLEKEKLGKVWSLADIDKDGALSRDEFAVAMHITTCAIIKHLPVPDHLPTTLGGRSRGVPNSKVA 384 S +++ PAER +Y + F +L G + + VL +S L E LGK+W LAD DKDG L R EF VAMH+ A+ KH H+PTTL R P V+ Sbjct: 126 SDWSIKPAEREKYSQLFDELQPN--NGLIAGNKVKGVLMESKLPLETLGKIWDLADQDKDGMLDRHEFLVAMHLVYKALEKH-----HIPTTLPAELRRAPPRPVS 224 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10424.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10424.2.1 >prot_C-tenellus_contig10424.2.1 ID=prot_C-tenellus_contig10424.2.1|Name=mRNA_C-tenellus_contig10424.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=131bp EGEDSKVIGGSTSTGDSGDEVDSMYAMSPAERARYHKAFSKLDKGARTGYback to top mRNA from alignment at C-tenellus_contig10424:3648..4654- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10424.2.1 ID=mRNA_C-tenellus_contig10424.2.1|Name=mRNA_C-tenellus_contig10424.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1007bp|location=Sequence derived from alignment at C-tenellus_contig10424:3648..4654- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10424:3648..4654- >mRNA_C-tenellus_contig10424.2.1 ID=mRNA_C-tenellus_contig10424.2.1|Name=mRNA_C-tenellus_contig10424.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=393bp|location=Sequence derived from alignment at C-tenellus_contig10424:3648..4654- (Choristocarpus tenellus KU2346)back to top |