mRNA_C-tenellus_contig1042.2.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1042.2.2
Unique NamemRNA_C-tenellus_contig1042.2.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 1.290e-47
Identity = 190/672 (28.27%), Postives = 274/672 (40.77%), Query Frame = 3
Query:  666 VECEHFRSMVKCLNENVSLPDREGLVALLEGYKQELLEKVALAVKDQHVSISVGAWRENTGLSTTHAFLNLSWIDEAWNLVELGLDCVKVNSGSREFFDVVEE---KIRGRSLIDRVQAFGTGSGEQAITKAGRVLMERGVVGEHVTCASRRLEHTVAVALGG-SIGLQGRTNGGRTREAVASARKLTERYMPFSQALKRLEECCALKGIGSPKVLRWPGVENFRGEPVSSDIWGLICNEEGEKRWCWWSVLAMVNNLVRLKDAIRLHEHVDGLSPMLTEEDWLILSKIVVILEPFVETKGVLEDSTTVTSSLVLPLVHDLLVDLRNAAKEYESSTSPSSDSTTVXXXXASSLPSGTNSSISDPATSSVNATPGTAAGATAAATTEEIGARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADVMEAERNKEILTVPPVATTDAVTPATNLSSTLLAASSELALNDPVLPSALGGPTFVAASPNSMGTISSGAGAVALVGGGSAEAKVGAMGADEEGCVERNPKRLRGFLAFSQGIIASPQPSRVTVGGTDGAMAKQRFRQAAHLEVASFKEAMGISMYDETVGSGVRVMLDPLKWWQHRASHFPLLAMVARRVLATPATQVHSERM 2669
            VE   F ++V  LN+    P R  LV  +   K+ L  +VAL + D++V+I+   W   +  S  +  L +++ID  W L  L L+C K ++GS    D+  E    I    L  RV A  T   E ++ KAGR+L   G   EH+ C++ R+E T +    G S+G            A+A AR +  RY   SQ   RL     +  +    VL                       ++ E RW  WS  AM+  L+ L  AI+LHE  D ++P+L+E DW +L  I  IL PF++ +  LE +  VT S+ +P + +L   L  A  +  ++                         IS                    A+T E  A  AV      +  DF   WGDG+ +     +G   Q  GF+ +Q+ ATA+DPR K LYG+ ++EH  +W  V  +A D+                       A   SS   A S       PV                                 G+     G  GA         PKR R   AF     A    +  + GG      +++      LEVASF+   GIS++      G +V  DPL WW+ R   FP LA +ARRVLA P++Q HSER+
Sbjct:   29 VEYPEFHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNES--YMSLTVAYIDVGWQLHHLSLNCTK-HTGSTHGEDLAREITSMIERHGLTGRVTACVTDC-EPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG------------ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVL-----------------------QDVETRW--WSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATD---------------------RFGIS--------------------ASTRE--AMEAVLPDAEALWEDFLNRWGDGSSIL-EYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIA----------------------AEKFSSDNTATSGSAPAAQPV---------------------------------GTPPVAPGGQGA---------PKRAR-LSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGT-DGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549          
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.340e-47
Identity = 191/711 (26.86%), Postives = 287/711 (40.37%), Query Frame = 3
Query:  690 MVKCLNENVSLPDREGLVALLEGYKQELLEKVALAVKDQHVSISVGAWRENTGLSTTHAFLNLSWIDEAWNLVELGLDCVKVNSGSREFFDV---VEEKIRGRSLIDRVQAFGTGSGEQAITKAGRVLMERGVVGEHVTCASRRLEHTVAVALGGSIGLQGRTNGGRTREAVASARKLTERYMPFSQALKRLEECCALKGIGSPKVLRWPGVENFRGEPVSSDIWGLICNEEGEKRWCWWSVLAMVNNLVRLKDAIRLHEHVDGLSPMLTEEDWLILSKIVVILEPFVETKGVLEDSTTVTSSLVLPLVHDLLVDLRNAAKEYESSTSPSSDSTTVXXXXASSLPSGTNSSISDPATSSVNATPGTAAGATAAATTEEIGARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADVMEAERNKEILTVPPVATTDAVTPATNLSSTLLAASSELALNDPVL--PSALGGPTFVAASPNSMGTISSGAGAVALVGGGSAEAKVGAMGADEEGCVERNPKRLRGFLAFSQGIIASPQPSRVTVGGTDGAMAKQRFRQAAHLEVASFKEAMGISMYD--ETVGSGVRVMLDPLKWWQHRASHFPLLAMVARRVLATPATQVHSERMFLSNGGCPRAIPRGPEELHLSNLPNIDLLVFLRNTWPKIDIWDK 2801
            MV  LN+   +P R  L++ +   K  L  +VAL +  + V+I+   W      S  +  L +++ID  W L  L LDC K ++G+    D+   V   +    L  RV A  T   E ++ KAGR+L   G    H+ C++ R+E T +    G           R+  A+  AR L  RY   SQ   RL + C +                 + EP+S         ++ E RW  WS  AMV  L+ L  AI+LHE +D + P+L++ DW +L  I  IL PF++ +  LE +  VT S+ +  + +L   L  A  + ++        TT                                             A  AV      ++ DF   WGDG+ +     +G   Q  GF+R+Q+ ATALDPR K LYG+ + EH G+W  V   A D+   +                       +     AS+E   +DPV   P+ LGG                                    GA          KR R   AF                       +++      +EV++FK A GI ++D  +T     +V  +PL  W+ +   +PLLA +ARRVLA P++Q  SER+F + G     +   P    L +  N++LLV+LRN W  +D W K
Sbjct:    1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNES--YMSLTVAYIDYEWKLHHLSLDCAK-HTGTTTGEDLAALVAGMVERHDLTGRVIACVTDC-EPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNG-----------RSLGALGLARTLVGRYKKSSQMAARLVQLCGI----------------LQMEPLS-------VMQDVETRW--WSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQK-------------------------------------------AMEAVRPDAEALMADFTNRWGDGSNIL-EYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKH----------------------AGDKAPASAEKPASDPVQTQPAPLGG----------------------------------GQGAS---------KRPR-MSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAG-----LTVTPTRSRLLD-ENVELLVYLRNVWGVVDEWKK 555          
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 6.850e-20
Identity = 92/315 (29.21%), Postives = 129/315 (40.95%), Query Frame = 3
Query: 1863 DFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADVMEAERNKEILTVPPVATTDAVTPATNLSSTLLAASSELALNDPVLPSALGGPTFVAASPNSMGTISSGAGAVALVGGGSAEAKVGAMGADEEGCVERNPKRLRGFLAFSQGIIASPQPSRVTVGGTDGAMAKQRFRQAAHLEVASFKEAMGISMYDETVGSGVRVMLDPLKWWQHRASHFPLLAMVARRVLATPATQVHSERMFLSNGGCPRAIPRGPEELHLSNLPNIDLLVFLRNTWPKIDIWDKRN 2807
            DF   WGDG  +     +G   Q GGF+  Q+LATALDPRTKILYGV E E   +W+LV  EA  +    RN E                    ++  A+S +             GP                                                      A + G   +PQ       G D +  +     +  +E+ +FK + GI MY+E    G +V LDPL WW+ R + FP LA +ARRVLA PATQ  SER+F   G     + +    L  +    ++LLV LR++W  ++ W++ N
Sbjct:   50 DFINRWGDGRNILI-YKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSE--------------------NSQRASSQQ-------------GPXXXXXXXXXXXXX---------------------XXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDE----GADSSFVRL-ITSSVRVELTAFKVSTGIKMYEEDK-EGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNI---VTKNRNNLAPTT---VELLVLLRHSWKIVEEWEQSN 297          
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 2.130e-16
Identity = 115/468 (24.57%), Postives = 179/468 (38.25%), Query Frame = 3
Query: 1395 WWSVLAMVNNLVRLKDAIRLHEHVDGLSPMLTEEDWLILSKIVVILEPFVETKGVLEDSTTVTSSLVLPLVHDLLVDLRNAAKEYESSTSPSSDSTTVXXXXASSLPSGTNSSISDPATSSVNATPGTAAGATAAATTEEIGARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADV-MEAERNKEILTVPPVATTDAVTPATNLSSTLLAASSELALNDPVLPSALGGPTFVAASPNSMGTISSGAGAVALVGGGSAEAKVGAMGADEEGCVERNPKRLRGFLAFSQGIIASPQPSRVTVGGTDGAMAKQRFRQAAHLEVASFKEAMGISMYDETVGSGVRVMLDPLKWWQHRASHFPLLAMVARRVLATPATQVHSERMFLSNGGCPRAIPRGPEELHLSNLPNIDLLVFLRNTWPKIDIW 2795
            WWS    +  L+ L+  I  HE +D   P+L E+DW +L  +  +L+PF+  +  LE S  VT  LV P + DL   L  A +  ++ + P+                   S +++                          A+  V      +  D    WGD T V    ++GP  Q  GF++ Q+LATAL PR+K LYG+ E+EH  +W+    EA  V +EA+  ++                                                       T S+GA +  +      E                      G    S    +SP               +++       EV +FK   G+++  E  G  VR    PL+WW+ +A  +P LA +ARRVL  PA Q  SER+F S G     + +    +   +  N+ L+VFLRNT P++ ++
Sbjct:  164 WWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAE------------------SIVAE--------------------------AKKDVILCAQALQTDLSRRWGDRTDVLV-YTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXTQSAGASSSPIP----VEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPL--------------RRQMESIISREVDAFKITPGLAVSWEEKGQEVRGK--PLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAG---LVVTKTRARM---DPENVGLMVFLRNTPPELSLF 550          
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.380e-11
Identity = 58/199 (29.15%), Postives = 90/199 (45.23%), Query Frame = 3
Query: 1464 VDGLSPMLTEEDWLILSKIVVILEPFVETKGVLEDSTTVTSSLVLPLVHDLLVDLRNAAKEYESSTSPSSDSTTVXXXXASSLPSGTNSSISDPATSSVNATPGTAAGATAAATTEEIGARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADV 2060
            +D + P+L E+DW +L  +  +L PF+  +  LE S  VT SLV   + DL  +L  A +  ++ + P+                   S +++                          A+  +      +  D    W DGT V    ++GP  Q  GF+++Q+LATALDPR+K LYG+ E+EH  +WE V  EA  V
Sbjct:  159 IDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAE------------------SIVAE--------------------------AKKDILRCAPALQTDLSRRWRDGTDVLV-YTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKV 312          
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.830e-11
Identity = 63/222 (28.38%), Postives = 95/222 (42.79%), Query Frame = 3
Query: 1395 WWSVLAMVNNLVRLKDAIRLHEHVDGLSPMLTEEDWLILSKIVVILEPFVETKGVLEDSTTVTSSLVLPLVHDLLVDLRNAAKEYESSTSPSSDSTTVXXXXASSLPSGTNSSISDPATSSVNATPGTAAGATAAATTEEIGARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADV 2060
            WWS  A +  L+ L+  I  HE +D + P+L E+DW +L  +  + +PF+ ++   E S  VT SLV+P + DL  +L  A +  ++   P+                                              E I A    D  V    +  +          TS+   P G    F+++Q+LATALDPR+K LYG+ E+EH  +WE V  EA  V
Sbjct:  208 WWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPA----------------------------------------------ESIVAEAKKD--VFFAPKHVR---------PTSVIVEPRG----FKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKV 368          
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 1.750e-7
Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = 3
Query: 1821 ARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADVMEAE-RNKE 2084
            AR AV   +  +  DF   WGDG  +  +  +GP  Q  GF+  Q+LATALDPRTKIL+GV E E   +W+LV  E A  +  E RN E
Sbjct:  158 ARAAVMPCIKALRDDFINRWGDGRNIL-NYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLVQEEEAVKIAVETRNAE 245          
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.390e-6
Identity = 35/74 (47.30%), Postives = 43/74 (58.11%), Query Frame = 3
Query: 1863 DFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADVMEAERNKE 2084
            D+   WGDG  +     +GP  Q GGF+   +LATALDPRTKI YGV E E   +W+LV  EA  +    RN E
Sbjct:  249 DYIDRWGDGHNILI-YKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAE 321          
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: R7UJ35_CAPTE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UJ35_CAPTE)

HSP 1 Score: 51.6 bits (122), Expect = 9.230e-5
Identity = 27/73 (36.99%), Postives = 41/73 (56.16%), Query Frame = 3
Query: 2562 DPLKWWQHRASHFPLLAMVARRVLATPATQVHSERMFLSNGGCPRAIPRGPEELHLSNLPNIDLLVFLRNTWP 2780
            DPLKWW  + + +P +A++AR +LA PA+ V +ER+F   G     +     +L  SN   +D L+FL    P
Sbjct:    3 DPLKWWAAKEAAYPSVAVIARHILAVPASSVPAERIFSLGGNI---VTNKRTKLTSSN---VDSLIFLAKNMP 69          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5KUY5_9PHAE1.290e-4728.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCS5_ECTSI1.340e-4726.86Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5JWI1_9PHAE6.850e-2029.21Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JHP9_9PHAE2.130e-1624.57Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A6H5KVI1_9PHAE1.380e-1129.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJV8_9PHAE1.830e-1128.38Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JVE5_9PHAE1.750e-746.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y8_9PHAE1.390e-647.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
R7UJ35_CAPTE9.230e-536.99Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1042contigC-tenellus_contig1042:6518..9625 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G5Z0
PFAMsDUF659,Dimer_Tnp_hAT,zf-BED
Model size2894
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.4e-49
EggNOG OGsKOG1121@1|root,KOG1121@2759|Eukaryota
Descriptionprotein dimerization activity
Cds size2721
COG categoryE
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789130.6143434-UTR-C-tenellus_contig1042:6517..65411680789130.6143434-UTR-C-tenellus_contig1042:6517..6541Choristocarpus tenellus KU2346UTRC-tenellus_contig1042 6518..6541 -
1680789130.6515756-UTR-C-tenellus_contig1042:9476..96251680789130.6515756-UTR-C-tenellus_contig1042:9476..9625Choristocarpus tenellus KU2346UTRC-tenellus_contig1042 9477..9625 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789130.6280565-CDS-C-tenellus_contig1042:6541..87491680789130.6280565-CDS-C-tenellus_contig1042:6541..8749Choristocarpus tenellus KU2346CDSC-tenellus_contig1042 6542..8749 -
1680789130.6426663-CDS-C-tenellus_contig1042:8963..94761680789130.6426663-CDS-C-tenellus_contig1042:8963..9476Choristocarpus tenellus KU2346CDSC-tenellus_contig1042 8964..9476 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1042.2.2prot_C-tenellus_contig1042.2.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1042 6542..9476 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1042.2.2

>prot_C-tenellus_contig1042.2.2 ID=prot_C-tenellus_contig1042.2.2|Name=mRNA_C-tenellus_contig1042.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=907bp
MGLHGDSLSTSSSVLPTIAAPGSSSKRSSGKGKDVAGGAPGGDVFDSKEE
LREEKERRARDWPKMRPNGARAHVWKYFKIYAGGREPHKAICNLCVESGD
LSHAEISYGKSRSSSNLLSHLNCARRPGHKAAYQECLDLKGSQTSMSHFY
EPGVPCWHRPLCRFLVQQELSTVECEHFRSMVKCLNENVSLPDREGLVAL
LEGYKQELLEKVALAVKDQHVSISVGAWRENTGLSTTHAFLNLSWIDEAW
NLVELGLDCVKVNSGSREFFDVVEEKIRGRSLIDRVQAFGTGSGEQAITK
AGRVLMERGVVGEHVTCASRRLEHTVAVALGGSIGLQGRTNGGRTREAVA
SARKLTERYMPFSQALKRLEECCALKGIGSPKVLRWPGVENFRGEPVSSD
IWGLICNEEGEKRWCWWSVLAMVNNLVRLKDAIRLHEHVDGLSPMLTEED
WLILSKIVVILEPFVETKGVLEDSTTVTSSLVLPLVHDLLVDLRNAAKEY
ESSTSPSSDSTTVTTTMASSLPSGTNSSISDPATSSVNATPGTAAGATAA
ATTEEIGARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRR
RQLLATALDPRTKILYGVPESEHMGIWELVVMEAADVMEAERNKEILTVP
PVATTDAVTPATNLSSTLLAASSELALNDPVLPSALGGPTFVAASPNSMG
TISSGAGAVALVGGGSAEAKVGAMGADEEGCVERNPKRLRGFLAFSQGII
ASPQPSRVTVGGTDGAMAKQRFRQAAHLEVASFKEAMGISMYDETVGSGV
RVMLDPLKWWQHRASHFPLLAMVARRVLATPATQVHSERMFLSNGGCPRA
IPRGPEELHLSNLPNIDLLVFLRNTWPKIDIWDKRNEESTRQGSAVGVGV
NSSCAT*
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mRNA from alignment at C-tenellus_contig1042:6518..9625-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1042.2.2 ID=mRNA_C-tenellus_contig1042.2.2|Name=mRNA_C-tenellus_contig1042.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3108bp|location=Sequence derived from alignment at C-tenellus_contig1042:6518..9625- (Choristocarpus tenellus KU2346)
AAAAATAATACTTGCTGTTCTATTACAGGCTTCGATAAAATTCACTTCGA TTCGAGTGACTTTGTATGGTATAACAATATAAGGCAATCGGTTCAGCGGT TCACCTCTTTCGATAACTGAGAACACCATCAGTAGAAGGGGTGTGTGGTA TGGGTTTGCACGGAGATTCGTTAAGTACATCGTCTAGTGTACTTCCGACT ATAGCTGCCCCTGGTTCCTCCAGCAAGAGGTCATCTGGTAAGGGAAAGGA TGTTGCGGGAGGAGCTCCAGGTGGAGATGTGTTCGACTCCAAAGAGGAGC TTAGGGAGGAGAAGGAGCGGCGAGCCAGGGATTGGCCTAAGATGAGACCT AATGGGGCGAGGGCTCATGTATGGAAGTATTTCAAGATATATGCCGGTGG AAGGGAGCCTCACAAAGCAATATGTAACCTGTGTGTCGAGAGTGGAGATT TGAGTCATGCTGAGATAAGTTATGGTAAGTCCAGGTCGTCCTCAAACCTC CTCAGCCACCTCAACTGCGCAAGGAGACCGGGTCACAAGGCTGCTTATCA AGAGTGCCTGGATTTAAAAGGTTCTCAAACGTCGATGTCACACTTCTACG AGCCAGGGGTTCCTTGCTGGCATCGCCCACTTTGCCGCTTCTTGGTGCAA CAAGAACTCTCGGTGAGGAAACTCTCAATGCCATCCCTTTCCCAAACCTT ACCTTAATTTACCTTCATTCACCCTCTTGCCCGTATAGTTTCCGGTCGAC GGGAACCCTCCAACATTCGAACATGGACCAATTTCAATGCCGGCCTTGTG TGGTACTCTCCCACACGCCTATTCAAGCCCCTTCGTGCTTCCTCCCCTCT TCTTCCTTGGCCTGGTCTATCGACAGACTGTTGAATGCGAACATTTCCGA AGCATGGTGAAGTGTCTCAACGAAAATGTATCCCTCCCTGACCGCGAGGG CCTCGTCGCTCTTCTAGAAGGATACAAACAGGAGCTTCTGGAAAAGGTGG CGCTTGCGGTCAAAGACCAGCACGTCAGCATCTCCGTGGGGGCATGGAGA GAAAACACTGGCCTCTCTACAACTCACGCATTCCTCAATCTAAGCTGGAT CGACGAGGCCTGGAACCTGGTGGAGCTTGGGCTGGATTGTGTAAAGGTGA ACTCGGGAAGCAGAGAGTTTTTTGACGTTGTCGAGGAGAAGATCAGGGGG CGCTCTCTGATAGATCGTGTACAGGCCTTTGGGACGGGCTCTGGTGAGCA GGCGATCACCAAGGCTGGTCGCGTCCTGATGGAAAGGGGTGTGGTTGGGG AACATGTCACCTGTGCCAGCCGCCGGCTAGAGCACACCGTAGCGGTGGCC CTTGGTGGATCTATTGGGCTACAGGGAAGGACCAATGGCGGGAGGACAAG AGAGGCTGTGGCATCGGCACGGAAACTCACCGAACGCTACATGCCGTTTA GTCAAGCCCTGAAGCGCCTCGAGGAATGCTGCGCCCTGAAAGGCATTGGC TCGCCCAAGGTTCTGAGGTGGCCGGGGGTTGAGAATTTCAGGGGGGAACC AGTTAGTAGCGACATCTGGGGATTGATTTGCAACGAAGAAGGCGAGAAGA GGTGGTGTTGGTGGTCTGTGCTTGCAATGGTGAATAATCTTGTGCGCCTA AAGGATGCTATTCGCTTGCATGAACATGTGGATGGCCTCTCACCCATGCT AACCGAAGAAGATTGGCTCATCCTATCCAAGATTGTAGTTATACTTGAGC CATTTGTAGAGACTAAAGGCGTTTTGGAGGACAGTACCACTGTGACCAGC AGCCTTGTTCTTCCCCTTGTGCACGACCTCCTTGTTGACCTGAGGAATGC GGCCAAGGAGTATGAGAGCAGCACAAGCCCCAGCAGTGACAGCACAACTG TTACCACCACCATGGCCTCTTCACTACCCTCTGGTACCAACAGTAGCATT TCTGACCCTGCCACAAGTTCCGTAAATGCTACCCCTGGAACTGCTGCTGG TGCTACTGCTGCCGCTACTACAGAAGAGATAGGAGCTAGGAATGCAGTTG ATCACAGTGTTGCACTGATGCTGAGAGACTTCCAGTGCTGGTGGGGGGAT GGGACGGGTGTCGCTACAAGTTTGAGCGATGGTCCTGAGGGACAGCTGGG GGGATTCAGGAGGAGACAACTTCTTGCAACGGCCTTGGATCCCAGGACCA AGATTCTGTATGGTGTGCCGGAAAGCGAGCACATGGGTATCTGGGAGCTT GTGGTAATGGAGGCTGCTGATGTCATGGAAGCGGAGCGCAACAAGGAGAT CTTAACAGTGCCCCCAGTGGCAACAACTGACGCAGTGACTCCAGCAACAA ACCTTTCTTCAACCTTGTTGGCTGCATCATCAGAGCTTGCTCTAAATGAT CCAGTCCTGCCATCGGCGTTGGGGGGCCCTACCTTCGTAGCTGCCTCACC AAATAGTATGGGGACAATTTCTTCGGGTGCTGGTGCTGTTGCCTTGGTGG GGGGGGGCAGTGCAGAAGCAAAGGTGGGGGCTATGGGTGCGGACGAGGAG GGGTGTGTCGAGCGAAATCCAAAGAGGCTGCGTGGCTTCTTGGCGTTCAG TCAGGGGATAATTGCCAGCCCTCAACCAAGCAGGGTCACAGTGGGTGGTA CCGATGGTGCCATGGCCAAGCAGCGCTTTCGACAAGCTGCGCATCTGGAA GTGGCGTCTTTTAAGGAAGCCATGGGTATTTCTATGTACGATGAGACAGT TGGCAGCGGGGTTAGGGTGATGCTTGACCCGCTCAAGTGGTGGCAGCACA GGGCCAGTCACTTTCCCCTTCTAGCTATGGTAGCACGCCGTGTCTTGGCC ACTCCGGCAACCCAGGTACACTCGGAGCGCATGTTTCTTAGCAACGGGGG CTGCCCCAGGGCAATTCCTAGAGGCCCTGAGGAGCTCCATTTGAGTAACT TACCCAACATTGATCTTCTTGTATTTTTGCGAAACACTTGGCCTAAGATT GACATTTGGGACAAGCGGAACGAGGAATCTACAAGGCAGGGATCAGCTGT GGGCGTGGGAGTTAACAGCTCTTGTGCTACATGAGTGATAACCAGAGGAG AGGGCCTT
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Coding sequence (CDS) from alignment at C-tenellus_contig1042:6518..9625-

>mRNA_C-tenellus_contig1042.2.2 ID=mRNA_C-tenellus_contig1042.2.2|Name=mRNA_C-tenellus_contig1042.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=2721bp|location=Sequence derived from alignment at C-tenellus_contig1042:6518..9625- (Choristocarpus tenellus KU2346)
ATGGGTTTGCACGGAGATTCGTTAAGTACATCGTCTAGTGTACTTCCGAC
TATAGCTGCCCCTGGTTCCTCCAGCAAGAGGTCATCTGGTAAGGGAAAGG
ATGTTGCGGGAGGAGCTCCAGGTGGAGATGTGTTCGACTCCAAAGAGGAG
CTTAGGGAGGAGAAGGAGCGGCGAGCCAGGGATTGGCCTAAGATGAGACC
TAATGGGGCGAGGGCTCATGTATGGAAGTATTTCAAGATATATGCCGGTG
GAAGGGAGCCTCACAAAGCAATATGTAACCTGTGTGTCGAGAGTGGAGAT
TTGAGTCATGCTGAGATAAGTTATGGTAAGTCCAGGTCGTCCTCAAACCT
CCTCAGCCACCTCAACTGCGCAAGGAGACCGGGTCACAAGGCTGCTTATC
AAGAGTGCCTGGATTTAAAAGGTTCTCAAACGTCGATGTCACACTTCTAC
GAGCCAGGGGTTCCTTGCTGGCATCGCCCACTTTGCCGCTTCTTGGTGCA
ACAAGAACTCTCGACTGTTGAATGCGAACATTTCCGAAGCATGGTGAAGT
GTCTCAACGAAAATGTATCCCTCCCTGACCGCGAGGGCCTCGTCGCTCTT
CTAGAAGGATACAAACAGGAGCTTCTGGAAAAGGTGGCGCTTGCGGTCAA
AGACCAGCACGTCAGCATCTCCGTGGGGGCATGGAGAGAAAACACTGGCC
TCTCTACAACTCACGCATTCCTCAATCTAAGCTGGATCGACGAGGCCTGG
AACCTGGTGGAGCTTGGGCTGGATTGTGTAAAGGTGAACTCGGGAAGCAG
AGAGTTTTTTGACGTTGTCGAGGAGAAGATCAGGGGGCGCTCTCTGATAG
ATCGTGTACAGGCCTTTGGGACGGGCTCTGGTGAGCAGGCGATCACCAAG
GCTGGTCGCGTCCTGATGGAAAGGGGTGTGGTTGGGGAACATGTCACCTG
TGCCAGCCGCCGGCTAGAGCACACCGTAGCGGTGGCCCTTGGTGGATCTA
TTGGGCTACAGGGAAGGACCAATGGCGGGAGGACAAGAGAGGCTGTGGCA
TCGGCACGGAAACTCACCGAACGCTACATGCCGTTTAGTCAAGCCCTGAA
GCGCCTCGAGGAATGCTGCGCCCTGAAAGGCATTGGCTCGCCCAAGGTTC
TGAGGTGGCCGGGGGTTGAGAATTTCAGGGGGGAACCAGTTAGTAGCGAC
ATCTGGGGATTGATTTGCAACGAAGAAGGCGAGAAGAGGTGGTGTTGGTG
GTCTGTGCTTGCAATGGTGAATAATCTTGTGCGCCTAAAGGATGCTATTC
GCTTGCATGAACATGTGGATGGCCTCTCACCCATGCTAACCGAAGAAGAT
TGGCTCATCCTATCCAAGATTGTAGTTATACTTGAGCCATTTGTAGAGAC
TAAAGGCGTTTTGGAGGACAGTACCACTGTGACCAGCAGCCTTGTTCTTC
CCCTTGTGCACGACCTCCTTGTTGACCTGAGGAATGCGGCCAAGGAGTAT
GAGAGCAGCACAAGCCCCAGCAGTGACAGCACAACTGTTACCACCACCAT
GGCCTCTTCACTACCCTCTGGTACCAACAGTAGCATTTCTGACCCTGCCA
CAAGTTCCGTAAATGCTACCCCTGGAACTGCTGCTGGTGCTACTGCTGCC
GCTACTACAGAAGAGATAGGAGCTAGGAATGCAGTTGATCACAGTGTTGC
ACTGATGCTGAGAGACTTCCAGTGCTGGTGGGGGGATGGGACGGGTGTCG
CTACAAGTTTGAGCGATGGTCCTGAGGGACAGCTGGGGGGATTCAGGAGG
AGACAACTTCTTGCAACGGCCTTGGATCCCAGGACCAAGATTCTGTATGG
TGTGCCGGAAAGCGAGCACATGGGTATCTGGGAGCTTGTGGTAATGGAGG
CTGCTGATGTCATGGAAGCGGAGCGCAACAAGGAGATCTTAACAGTGCCC
CCAGTGGCAACAACTGACGCAGTGACTCCAGCAACAAACCTTTCTTCAAC
CTTGTTGGCTGCATCATCAGAGCTTGCTCTAAATGATCCAGTCCTGCCAT
CGGCGTTGGGGGGCCCTACCTTCGTAGCTGCCTCACCAAATAGTATGGGG
ACAATTTCTTCGGGTGCTGGTGCTGTTGCCTTGGTGGGGGGGGGCAGTGC
AGAAGCAAAGGTGGGGGCTATGGGTGCGGACGAGGAGGGGTGTGTCGAGC
GAAATCCAAAGAGGCTGCGTGGCTTCTTGGCGTTCAGTCAGGGGATAATT
GCCAGCCCTCAACCAAGCAGGGTCACAGTGGGTGGTACCGATGGTGCCAT
GGCCAAGCAGCGCTTTCGACAAGCTGCGCATCTGGAAGTGGCGTCTTTTA
AGGAAGCCATGGGTATTTCTATGTACGATGAGACAGTTGGCAGCGGGGTT
AGGGTGATGCTTGACCCGCTCAAGTGGTGGCAGCACAGGGCCAGTCACTT
TCCCCTTCTAGCTATGGTAGCACGCCGTGTCTTGGCCACTCCGGCAACCC
AGGTACACTCGGAGCGCATGTTTCTTAGCAACGGGGGCTGCCCCAGGGCA
ATTCCTAGAGGCCCTGAGGAGCTCCATTTGAGTAACTTACCCAACATTGA
TCTTCTTGTATTTTTGCGAAACACTTGGCCTAAGATTGACATTTGGGACA
AGCGGAACGAGGAATCTACAAGGCAGGGATCAGCTGTGGGCGTGGGAGTT
AACAGCTCTTGTGCTACATGA
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