mRNA_C-tenellus_contig1042.2.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 189 bits (480), Expect = 1.290e-47 Identity = 190/672 (28.27%), Postives = 274/672 (40.77%), Query Frame = 3 Query: 666 VECEHFRSMVKCLNENVSLPDREGLVALLEGYKQELLEKVALAVKDQHVSISVGAWRENTGLSTTHAFLNLSWIDEAWNLVELGLDCVKVNSGSREFFDVVEE---KIRGRSLIDRVQAFGTGSGEQAITKAGRVLMERGVVGEHVTCASRRLEHTVAVALGG-SIGLQGRTNGGRTREAVASARKLTERYMPFSQALKRLEECCALKGIGSPKVLRWPGVENFRGEPVSSDIWGLICNEEGEKRWCWWSVLAMVNNLVRLKDAIRLHEHVDGLSPMLTEEDWLILSKIVVILEPFVETKGVLEDSTTVTSSLVLPLVHDLLVDLRNAAKEYESSTSPSSDSTTVXXXXASSLPSGTNSSISDPATSSVNATPGTAAGATAAATTEEIGARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADVMEAERNKEILTVPPVATTDAVTPATNLSSTLLAASSELALNDPVLPSALGGPTFVAASPNSMGTISSGAGAVALVGGGSAEAKVGAMGADEEGCVERNPKRLRGFLAFSQGIIASPQPSRVTVGGTDGAMAKQRFRQAAHLEVASFKEAMGISMYDETVGSGVRVMLDPLKWWQHRASHFPLLAMVARRVLATPATQVHSERM 2669 VE F ++V LN+ P R LV + K+ L +VAL + D++V+I+ W + S + L +++ID W L L L+C K ++GS D+ E I L RV A T E ++ KAGR+L G EH+ C++ R+E T + G S+G A+A AR + RY SQ RL + + VL ++ E RW WS AM+ L+ L AI+LHE D ++P+L+E DW +L I IL PF++ + LE + VT S+ +P + +L L A + ++ IS A+T E A AV + DF WGDG+ + +G Q GF+ +Q+ ATA+DPR K LYG+ ++EH +W V +A D+ A SS A S PV G+ G GA PKR R AF A + + GG +++ LEVASF+ GIS++ G +V DPL WW+ R FP LA +ARRVLA P++Q HSER+ Sbjct: 29 VEYPEFHAVVSGLNKKARAPIRRALVEKMREIKKNLESEVALMLDDEYVAITTDGWTSRSNES--YMSLTVAYIDVGWQLHHLSLNCTK-HTGSTHGEDLAREITSMIERHGLTGRVTACVTDC-EPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG------------ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVL-----------------------QDVETRW--WSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATD---------------------RFGIS--------------------ASTRE--AMEAVLPDAEALWEDFLNRWGDGSSIL-EYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIA----------------------AEKFSSDNTATSGSAPAAQPV---------------------------------GTPPVAPGGQGA---------PKRAR-LSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGT-DGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.340e-47 Identity = 191/711 (26.86%), Postives = 287/711 (40.37%), Query Frame = 3 Query: 690 MVKCLNENVSLPDREGLVALLEGYKQELLEKVALAVKDQHVSISVGAWRENTGLSTTHAFLNLSWIDEAWNLVELGLDCVKVNSGSREFFDV---VEEKIRGRSLIDRVQAFGTGSGEQAITKAGRVLMERGVVGEHVTCASRRLEHTVAVALGGSIGLQGRTNGGRTREAVASARKLTERYMPFSQALKRLEECCALKGIGSPKVLRWPGVENFRGEPVSSDIWGLICNEEGEKRWCWWSVLAMVNNLVRLKDAIRLHEHVDGLSPMLTEEDWLILSKIVVILEPFVETKGVLEDSTTVTSSLVLPLVHDLLVDLRNAAKEYESSTSPSSDSTTVXXXXASSLPSGTNSSISDPATSSVNATPGTAAGATAAATTEEIGARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADVMEAERNKEILTVPPVATTDAVTPATNLSSTLLAASSELALNDPVL--PSALGGPTFVAASPNSMGTISSGAGAVALVGGGSAEAKVGAMGADEEGCVERNPKRLRGFLAFSQGIIASPQPSRVTVGGTDGAMAKQRFRQAAHLEVASFKEAMGISMYD--ETVGSGVRVMLDPLKWWQHRASHFPLLAMVARRVLATPATQVHSERMFLSNGGCPRAIPRGPEELHLSNLPNIDLLVFLRNTWPKIDIWDK 2801 MV LN+ +P R L++ + K L +VAL + + V+I+ W S + L +++ID W L L LDC K ++G+ D+ V + L RV A T E ++ KAGR+L G H+ C++ R+E T + G R+ A+ AR L RY SQ RL + C + + EP+S ++ E RW WS AMV L+ L AI+LHE +D + P+L++ DW +L I IL PF++ + LE + VT S+ + + +L L A + ++ TT A AV ++ DF WGDG+ + +G Q GF+R+Q+ ATALDPR K LYG+ + EH G+W V A D+ + + AS+E +DPV P+ LGG GA KR R AF +++ +EV++FK A GI ++D +T +V +PL W+ + +PLLA +ARRVLA P++Q SER+F + G + P L + N++LLV+LRN W +D W K Sbjct: 1 MVSALNKRAKVPSRRELLSRMRAVKTALESEVALMLDAEFVAITTDGWTSRNNES--YMSLTVAYIDYEWKLHHLSLDCAK-HTGTTTGEDLAALVAGMVERHDLTGRVIACVTDC-EPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNG-----------RSLGALGLARTLVGRYKKSSQMAARLVQLCGI----------------LQMEPLS-------VMQDVETRW--WSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQK-------------------------------------------AMEAVRPDAEALMADFTNRWGDGSNIL-EYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKH----------------------AGDKAPASAEKPASDPVQTQPAPLGG----------------------------------GQGAS---------KRPR-MSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAG-----LTVTPTRSRLLD-ENVELLVYLRNVWGVVDEWKK 555
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 102 bits (253), Expect = 6.850e-20 Identity = 92/315 (29.21%), Postives = 129/315 (40.95%), Query Frame = 3 Query: 1863 DFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADVMEAERNKEILTVPPVATTDAVTPATNLSSTLLAASSELALNDPVLPSALGGPTFVAASPNSMGTISSGAGAVALVGGGSAEAKVGAMGADEEGCVERNPKRLRGFLAFSQGIIASPQPSRVTVGGTDGAMAKQRFRQAAHLEVASFKEAMGISMYDETVGSGVRVMLDPLKWWQHRASHFPLLAMVARRVLATPATQVHSERMFLSNGGCPRAIPRGPEELHLSNLPNIDLLVFLRNTWPKIDIWDKRN 2807 DF WGDG + +G Q GGF+ Q+LATALDPRTKILYGV E E +W+LV EA + RN E ++ A+S + GP A + G +PQ G D + + + +E+ +FK + GI MY+E G +V LDPL WW+ R + FP LA +ARRVLA PATQ SER+F G + + L + ++LLV LR++W ++ W++ N Sbjct: 50 DFINRWGDGRNILI-YKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSE--------------------NSQRASSQQ-------------GPXXXXXXXXXXXXX---------------------XXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDE----GADSSFVRL-ITSSVRVELTAFKVSTGIKMYEEDK-EGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNI---VTKNRNNLAPTT---VELLVLLRHSWKIVEEWEQSN 297
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 2.130e-16 Identity = 115/468 (24.57%), Postives = 179/468 (38.25%), Query Frame = 3 Query: 1395 WWSVLAMVNNLVRLKDAIRLHEHVDGLSPMLTEEDWLILSKIVVILEPFVETKGVLEDSTTVTSSLVLPLVHDLLVDLRNAAKEYESSTSPSSDSTTVXXXXASSLPSGTNSSISDPATSSVNATPGTAAGATAAATTEEIGARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADV-MEAERNKEILTVPPVATTDAVTPATNLSSTLLAASSELALNDPVLPSALGGPTFVAASPNSMGTISSGAGAVALVGGGSAEAKVGAMGADEEGCVERNPKRLRGFLAFSQGIIASPQPSRVTVGGTDGAMAKQRFRQAAHLEVASFKEAMGISMYDETVGSGVRVMLDPLKWWQHRASHFPLLAMVARRVLATPATQVHSERMFLSNGGCPRAIPRGPEELHLSNLPNIDLLVFLRNTWPKIDIW 2795 WWS + L+ L+ I HE +D P+L E+DW +L + +L+PF+ + LE S VT LV P + DL L A + ++ + P+ S +++ A+ V + D WGD T V ++GP Q GF++ Q+LATAL PR+K LYG+ E+EH +W+ EA V +EA+ ++ T S+GA + + E G S +SP +++ EV +FK G+++ E G VR PL+WW+ +A +P LA +ARRVL PA Q SER+F S G + + + + N+ L+VFLRNT P++ ++ Sbjct: 164 WWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAE------------------SIVAE--------------------------AKKDVILCAQALQTDLSRRWGDRTDVLV-YTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXTQSAGASSSPIP----VEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPL--------------RRQMESIISREVDAFKITPGLAVSWEEKGQEVRGK--PLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAG---LVVTKTRARM---DPENVGLMVFLRNTPPELSLF 550
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 78.6 bits (192), Expect = 1.380e-11 Identity = 58/199 (29.15%), Postives = 90/199 (45.23%), Query Frame = 3 Query: 1464 VDGLSPMLTEEDWLILSKIVVILEPFVETKGVLEDSTTVTSSLVLPLVHDLLVDLRNAAKEYESSTSPSSDSTTVXXXXASSLPSGTNSSISDPATSSVNATPGTAAGATAAATTEEIGARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADV 2060 +D + P+L E+DW +L + +L PF+ + LE S VT SLV + DL +L A + ++ + P+ S +++ A+ + + D W DGT V ++GP Q GF+++Q+LATALDPR+K LYG+ E+EH +WE V EA V Sbjct: 159 IDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAE------------------SIVAE--------------------------AKKDILRCAPALQTDLSRRWRDGTDVLV-YTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKV 312
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 79.0 bits (193), Expect = 1.830e-11 Identity = 63/222 (28.38%), Postives = 95/222 (42.79%), Query Frame = 3 Query: 1395 WWSVLAMVNNLVRLKDAIRLHEHVDGLSPMLTEEDWLILSKIVVILEPFVETKGVLEDSTTVTSSLVLPLVHDLLVDLRNAAKEYESSTSPSSDSTTVXXXXASSLPSGTNSSISDPATSSVNATPGTAAGATAAATTEEIGARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADV 2060 WWS A + L+ L+ I HE +D + P+L E+DW +L + + +PF+ ++ E S VT SLV+P + DL +L A + ++ P+ E I A D V + + TS+ P G F+++Q+LATALDPR+K LYG+ E+EH +WE V EA V Sbjct: 208 WWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQAHACPA----------------------------------------------ESIVAEAKKD--VFFAPKHVR---------PTSVIVEPRG----FKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKV 368
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 1.750e-7 Identity = 41/89 (46.07%), Postives = 52/89 (58.43%), Query Frame = 3 Query: 1821 ARNAVDHSVALMLRDFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADVMEAE-RNKE 2084 AR AV + + DF WGDG + + +GP Q GF+ Q+LATALDPRTKIL+GV E E +W+LV E A + E RN E Sbjct: 158 ARAAVMPCIKALRDDFINRWGDGRNIL-NYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLVQEEEAVKIAVETRNAE 245
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 1.390e-6 Identity = 35/74 (47.30%), Postives = 43/74 (58.11%), Query Frame = 3 Query: 1863 DFQCWWGDGTGVATSLSDGPEGQLGGFRRRQLLATALDPRTKILYGVPESEHMGIWELVVMEAADVMEAERNKE 2084 D+ WGDG + +GP Q GGF+ +LATALDPRTKI YGV E E +W+LV EA + RN E Sbjct: 249 DYIDRWGDGHNILI-YKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAE 321
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Match: R7UJ35_CAPTE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UJ35_CAPTE) HSP 1 Score: 51.6 bits (122), Expect = 9.230e-5 Identity = 27/73 (36.99%), Postives = 41/73 (56.16%), Query Frame = 3 Query: 2562 DPLKWWQHRASHFPLLAMVARRVLATPATQVHSERMFLSNGGCPRAIPRGPEELHLSNLPNIDLLVFLRNTWP 2780 DPLKWW + + +P +A++AR +LA PA+ V +ER+F G + +L SN +D L+FL P Sbjct: 3 DPLKWWAAKEAAYPSVAVIARHILAVPASSVPAERIFSLGGNI---VTNKRTKLTSSN---VDSLIFLAKNMP 69 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1042.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1042.2.2 >prot_C-tenellus_contig1042.2.2 ID=prot_C-tenellus_contig1042.2.2|Name=mRNA_C-tenellus_contig1042.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=907bp MGLHGDSLSTSSSVLPTIAAPGSSSKRSSGKGKDVAGGAPGGDVFDSKEEback to top mRNA from alignment at C-tenellus_contig1042:6518..9625- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1042.2.2 ID=mRNA_C-tenellus_contig1042.2.2|Name=mRNA_C-tenellus_contig1042.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3108bp|location=Sequence derived from alignment at C-tenellus_contig1042:6518..9625- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1042:6518..9625- >mRNA_C-tenellus_contig1042.2.2 ID=mRNA_C-tenellus_contig1042.2.2|Name=mRNA_C-tenellus_contig1042.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=2721bp|location=Sequence derived from alignment at C-tenellus_contig1042:6518..9625- (Choristocarpus tenellus KU2346)back to top |