mRNA_C-tenellus_contig10388.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10388.2.1 vs. uniprot
Match: D7FUX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX5_ECTSI) HSP 1 Score: 212 bits (540), Expect = 1.770e-61 Identity = 103/109 (94.50%), Postives = 107/109 (98.17%), Query Frame = 1 Query: 1 QSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFADSATQMPNRIGFDEFAAWYTEGGYRVSPWLELLDMDKWVVP 327 +SAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFA++ATQ PNRIGFDEFAAWYTEGG+RVSPWLELLDM KWVVP Sbjct: 1100 KSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEFAAWYTEGGFRVSPWLELLDMGKWVVP 1208
BLAST of mRNA_C-tenellus_contig10388.2.1 vs. uniprot
Match: A0A6H5JYX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX4_9PHAE) HSP 1 Score: 209 bits (532), Expect = 2.160e-60 Identity = 101/109 (92.66%), Postives = 106/109 (97.25%), Query Frame = 1 Query: 1 QSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFADSATQMPNRIGFDEFAAWYTEGGYRVSPWLELLDMDKWVVP 327 +SAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFA++ATQ PNRIGFDEFAAWYTEGG+RVSPWLELLD+ KWV P Sbjct: 1112 KSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAETATQTPNRIGFDEFAAWYTEGGFRVSPWLELLDIGKWVAP 1220
BLAST of mRNA_C-tenellus_contig10388.2.1 vs. uniprot
Match: A0A7S3XMH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMH2_HETAK) HSP 1 Score: 138 bits (348), Expect = 8.050e-39 Identity = 64/107 (59.81%), Postives = 82/107 (76.64%), Query Frame = 1 Query: 1 QSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFADSATQMPNRIGFDEFAAWYTEGGYRVSPWLELLDMDKWV 321 +S KLA+AF L DEDGD RL+RRGLWR+ R+FL+ LM++S +SS+ A EL +D+GAVWT+A IF N+I F+E AAWYTEGGYR+SPWLELLD+ KW+ Sbjct: 104 KSGKLAYAFDLLDEDGDGRLSRRGLWRFLRAFLSVLMSMSSKASSMEASELVDLIDNGAVWTAATIFEQCDLAEKNKIDFEELAAWYTEGGYRLSPWLELLDLKKWL 210
BLAST of mRNA_C-tenellus_contig10388.2.1 vs. uniprot
Match: A0A6U1MRH8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MRH8_9STRA) HSP 1 Score: 132 bits (333), Expect = 3.170e-36 Identity = 62/108 (57.41%), Postives = 80/108 (74.07%), Query Frame = 1 Query: 1 QSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFADSATQMPNRIGFDEFAAWYTEGGYRVSPWLELLDMDKWVV 324 +S KL++AF L DED D++L+RRGLWRY RSFLT LM S A+S LS EEL A+D GAV +A I+ ++ + N+I F+E AAWYT GGY +PWLELLD+ KW+V Sbjct: 137 KSTKLSYAFDLLDEDEDQKLSRRGLWRYLRSFLTVLMGASLANSGLSGEELVWAIDSGAVHAAAVIYQETEREEKNKISFEELAAWYTNGGYWFAPWLELLDLKKWLV 244
BLAST of mRNA_C-tenellus_contig10388.2.1 vs. uniprot
Match: A0A836CCD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCD1_9STRA) HSP 1 Score: 122 bits (307), Expect = 5.120e-32 Identity = 68/114 (59.65%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 1 QSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFAD-SATQMPNRIGFDEFAAWYTEG-------GYRVSPWLELLDMDKW 318 +S+KL +A+ L D D LTRRGLWRY RSFLT LMALS AS +L+A+ELTRAVDD AVW SA +FAD A RI F + A WYTEG G+ SPWLELLDM KW Sbjct: 157 KSSKLVYAWDLL-ADADGALTRRGLWRYMRSFLTVLMALSSASGTLTAKELTRAVDDSAVWVSARVFADLRAADAATRITFTDLADWYTEGLERSAAPGFMTSPWLELLDMSKW 269
BLAST of mRNA_C-tenellus_contig10388.2.1 vs. uniprot
Match: A0A7S3Y3W7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3W7_HETAK) HSP 1 Score: 111 bits (278), Expect = 5.670e-28 Identity = 60/120 (50.00%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 1 QSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIF----------ADSATQMPNRIGFDEFAAWYTEGGYRVSPWLELLDMDKW-VVP 327 +S KLA+AF L DE LTRRG+WR+ RS L+ L AL + + EEL VDDGAVWT+A F A + PNR+ FD+ AAWYT GGY+V PWLELLD+ KW ++P Sbjct: 55 KSVKLAYAFELLDEQSLGYLTRRGVWRFFRSILSMLAALCSSLLDVPTEELQARVDDGAVWTTARAFSYRGPPAAAAAPERERDPNRLSFDDLAAWYTGGGYQVCPWLELLDLRKWHLIP 174
BLAST of mRNA_C-tenellus_contig10388.2.1 vs. uniprot
Match: A0A7S0GD91_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GD91_9STRA) HSP 1 Score: 111 bits (277), Expect = 7.820e-28 Identity = 53/116 (45.69%), Postives = 75/116 (64.66%), Query Frame = 1 Query: 1 QSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFA--------DSATQMPNRIGFDEFAAWYTEGGYRVSPWLELLDMDKWVV 324 +S KL FAF L D+D D RL+RRGLW+Y RSFLT LM++S AS++++ + A+D + W +A +F ++ + FD+FA WYT+GGY PWLELLD+ KWV+ Sbjct: 130 KSDKLEFAFDLIDDDKDGRLSRRGLWKYLRSFLTVLMSISSASANMTEGHIYSAIDSASTWATAQVFGAEQDKGLGNNDNSSKRSVCFDDFAEWYTQGGYGSIPWLELLDLKKWVL 245
BLAST of mRNA_C-tenellus_contig10388.2.1 vs. uniprot
Match: A0A6U4G7P4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4G7P4_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.070e-24 Identity = 53/108 (49.07%), Postives = 66/108 (61.11%), Query Frame = 1 Query: 1 QSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSS-LSAEELTRAVDDGAVWTSAAIFADSATQMPNRIGFDEFAAWYTEGGYRVSPWLELLDMDKWV 321 +S KLAFAF + D G L+RR LWR+ R+FLTAL A SF S + E AVD A+WT+ +F NR F++ A WY EGGY +PWLELLD+ KWV Sbjct: 169 KSTKLAFAFDVLDTKGKGALSRRSLWRFFRAFLTALCAFSFESGADRDPHETGVAVDAAAIWTATKVFEKKEVDRANRATFNDIAQWYGEGGYTKAPWLELLDLRKWV 276
BLAST of mRNA_C-tenellus_contig10388.2.1 vs. uniprot
Match: A0A1V9ZSX4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSX4_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 5.760e-22 Identity = 54/112 (48.21%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 1 QSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFADSATQ----MPNRIGFDEFAAWYTEGGYRVSPWLELLDMDKWVV 324 +SAKLAF FGL DED D LTRR +W+Y RSFLT L+AL + LSA+ + D + + +IF +SA+ M ++ F EFA WY+E GY + PW+ELLD KW V Sbjct: 620 KSAKLAFCFGLFDEDADGYLTRREMWKYLRSFLTMLLALGNGAD-LSADTIGYICDAACISIAKSIFNESASGLDVVMKTKVCFAEFADWYSEKGYALIPWIELLDARKWPV 730
BLAST of mRNA_C-tenellus_contig10388.2.1 vs. uniprot
Match: A0A067CBJ2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBJ2_SAPPC) HSP 1 Score: 96.7 bits (239), Expect = 6.910e-21 Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 1 Query: 1 QSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEELTRAVDDGAVWTSAAIFADSATQ----MPNRIGFDEFAAWYTEGGYRVSPWLELLDMDKWVV 324 +S KLAF FGL DEDGD LTRR +W++ RSFLT L+AL + LSA+ + D + + +IF +S + + +++ F EFA WY+E GY + PW+ELLD KW + Sbjct: 625 KSTKLAFCFGLFDEDGDGFLTRREMWKFLRSFLTMLLALGNGAD-LSADTIGYICDAACISIAKSIFNESMSGDDLVLRSKVAFAEFADWYSEKGYALIPWIELLDAKKWPI 735 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10388.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10388.2.1 >prot_C-tenellus_contig10388.2.1 ID=prot_C-tenellus_contig10388.2.1|Name=mRNA_C-tenellus_contig10388.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=119bp QSAKLAFAFGLHDEDGDERLTRRGLWRYTRSFLTALMALSFASSSLSAEEback to top mRNA from alignment at C-tenellus_contig10388:4287..5516- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10388.2.1 ID=mRNA_C-tenellus_contig10388.2.1|Name=mRNA_C-tenellus_contig10388.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1230bp|location=Sequence derived from alignment at C-tenellus_contig10388:4287..5516- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10388:4287..5516- >mRNA_C-tenellus_contig10388.2.1 ID=mRNA_C-tenellus_contig10388.2.1|Name=mRNA_C-tenellus_contig10388.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=357bp|location=Sequence derived from alignment at C-tenellus_contig10388:4287..5516- (Choristocarpus tenellus KU2346)back to top |