mRNA_C-tenellus_contig10386.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10386.3.1 vs. uniprot
Match: D8LBP7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBP7_ECTSI) HSP 1 Score: 275 bits (703), Expect = 3.470e-83 Identity = 136/215 (63.26%), Postives = 168/215 (78.14%), Query Frame = 1 Query: 1 MTMDPDKLRIIRTKPKIDSHPDAIREFVGDYECFANTYRCSVSLCGDTETYPSVEHAFQASKTNDQGIRASIRVAKNGIEAKKAARVVKTTEEWKSSAEKTMEGLVRDKFRRNAKAREVLLSTGRVKLVFSNQHSDRVWGVCDGKGQNKLGKLLELVRAEAHAGKDTDAWCKSRFELAPSEDVAVSITVTKGGEVVAETCVKGKAVMKMGKEEDS 645 M++DPD + I+ +KPK DSH DAIR+F GD+EC +NTY+C VSL GD E YPSVEHA QASKT+D ++A+IR AKN IEAKK ARV K +W+ S+EK E LVRDKFRRNAKAREVL+ TGRVKLV++N H DR WGVC GKG+NKLGKLLE VRA+A AGKDT+AWC +RF+LA DV V V+K G++VA+ +GK V++MGK D+ Sbjct: 1 MSVDPDTVYIVHSKPKHDSHADAIRQFEGDFECLSNTYKCPVSLRGDPEPYPSVEHALQASKTDDFELKAAIRQAKNAIEAKKIARVAKPKPDWRGSSEKIAEALVRDKFRRNAKAREVLVGTGRVKLVYTNTHDDRFWGVCTGKGENKLGKLLERVRADALAGKDTEAWCATRFQLALPLDVMVGFAVSKAGKIVADPSFEGKPVIRMGKLADN 215
BLAST of mRNA_C-tenellus_contig10386.3.1 vs. uniprot
Match: A0A835YNI4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI4_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.060e-39 Identity = 91/211 (43.13%), Postives = 125/211 (59.24%), Query Frame = 1 Query: 10 DPDKLRIIRTKPK-IDSHPDAIREFVGDYECFANTYRCSVSLCGDTETYPSVEHAFQASKTNDQGIRASIRVAKNGIEAKKAARVVKTTEEWKSSAEKTMEGLVRDKFRRNAKAREVLLSTGRVKLVFSNQHSDRVWGVCDGKGQNKLGKLLELVRAEAHAGKDTDAWCKSRFELAPSEDVAVSITVTKGGEVVAETCVKGKAVMKMGKEE 639 +P + + +KPK +D AI +YE +N +R V L GD E YP+VEHAFQASKT D +RA IR A IEAKKAAR + ++ W+S +E ME LVRDKFRR+ K RE LL TG L + N+H+D++WGVCDGKG+NKLG+ F L P + A + ++KGG V+ ++G A++++GK E Sbjct: 3 EPGRYYYMPSKPKAVDPLKTAIHIGKEEYEYLSNLHRAKVYLPGDEEPYPTVEHAFQASKTEDMQLRAEIRAAPTAIEAKKAARKIAVSDAWRSRSEAIMEALVRDKFRRHDKYREQLLGTGAQLLAYVNEHNDKLWGVCDGKGENKLGE----------------------FALVP-QCSAAPMNISKGGAVLDTPVIEGTALVQLGKVE 190
BLAST of mRNA_C-tenellus_contig10386.3.1 vs. uniprot
Match: A0A7S2SUX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUX0_9STRA) HSP 1 Score: 128 bits (322), Expect = 4.510e-32 Identity = 74/177 (41.81%), Postives = 100/177 (56.50%), Query Frame = 1 Query: 4 TMDPDKLRIIRTKPKI-DSHPDAIREFVGDYECFANTYRCSVSLCGDTE-TYPSVEHAFQASKTNDQGIRASIRVAKNGIEAKKAARVV------KTTEEWKSSAEKTMEGLVRDKFRRNAKAREVLLSTGRVKLVFSNQHSDRVWGVCDGKGQNKLGKLLELVRAEAHAGKDTDAW 510 T+DPDK+R + KPKI + P F G+ + + ++C V L D + TYP+VEHA ASKT+D IR I ++ + AK+ + W++ + M L RDKFRR + RE LL TG KLV SN ++D WGVC GKGQN LG L+ +R E GKD +AW Sbjct: 70 TLDPDKVRYAKPKPKIQEEEPAGSGTFSGELKFLSPMHKCQVQLPSDPQRTYPTVEHALAASKTSDMEIRDKILAEEDPVAAKRLGTKCLGKSDSDAAKAWRARSPGIMAALFRDKFRRTPRYRERLLGTGHQKLVHSNTYNDTYWGVCKGKGQNVLGDTLQQLREEIRNGKDLNAW 246
BLAST of mRNA_C-tenellus_contig10386.3.1 vs. uniprot
Match: A0A7L9C501_9BACT (NADAR family protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A7L9C501_9BACT) HSP 1 Score: 109 bits (272), Expect = 1.380e-25 Identity = 63/143 (44.06%), Postives = 84/143 (58.74%), Query Frame = 1 Query: 67 AIREFVGDYECFANTYRCSVSLCGDTETYPSVEHAFQASKTNDQGIRASIRVAKNGIEAKKAARVVKTTEEWKSSAEKTMEGLVRDKFRRNAKAREVLLSTGRVKLVFSNQHSDRVWGVCDGKGQNKLGKLLELVRAEAHAGK 495 AI F G+Y +N + +V+ G + YPSVEHA+QA+KT D G RA I EAK+A R ++ +W+ ME VRDKF +A LL+TG +LV N DR WGVC+G+G+N LGK+L VR+E GK Sbjct: 27 AIDSFSGEYRYLSNFWLAAVTYEG--KRYPSVEHAYQAAKTLDVGERARIAGLATASEAKRAGRGLRVRVDWEQVKLGVMEQCVRDKFLNHADLGAKLLATGEAELVEGNDWGDRFWGVCEGRGENHLGKILMKVRSELRRGK 167
BLAST of mRNA_C-tenellus_contig10386.3.1 vs. uniprot
Match: A0A8I1NH68_9ACTN (NADAR family protein n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A8I1NH68_9ACTN) HSP 1 Score: 99.8 bits (247), Expect = 5.190e-22 Identity = 55/138 (39.86%), Postives = 81/138 (58.70%), Query Frame = 1 Query: 67 AIREFVGDYECFANTYRCSVSLCGDTETYPSVEHAFQASKTNDQGIRASIRVAKNGIEAKKAARVVKTTEEWKSSAEKTMEGLVRDKFRRNAKAREVLLSTGRVKLVFSNQHSDRVWGVCDGKGQNKLGKLLELVRAE 480 AI F G+Y +N + +V G + YP+VEHA+Q +K D +R IR+AK +AKK VK +W + M LV KF+R+++ + LL+TG +LV N D WGVC+G+G+N+LG++L VR E Sbjct: 21 AISGFFGEYRFLSNFWPATVRFEG--QVYPTVEHAYQGAKCVDPTMREQIRLAKRPGKAKKLGSKVKPRADWDEVRAEVMRHLVSQKFQRHSELGDQLLATGNAELVEENSWGDTFWGVCEGEGENRLGRILMEVRQE 156
BLAST of mRNA_C-tenellus_contig10386.3.1 vs. uniprot
Match: A0A0F9KUN4_9ZZZZ (NADAR domain-containing protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9KUN4_9ZZZZ) HSP 1 Score: 97.1 bits (240), Expect = 4.750e-21 Identity = 58/134 (43.28%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 79 FVGDYECFANTYRCSVSLCGDTETYPSVEHAFQASKTNDQGIRASIRVAKNGIEAKKAARVVKTTEEWKSSAEKTMEGLVRDKFRRNAKAREVLLSTGRVKLVFSNQHSDRVWGVCDGKGQNKLGKLLELVRAE 480 F G Y +N + C V L D + YPSVEHA+QA+KT D+G R +R A AK+ + V E+W ++ M LV+DKF R+ LL T V LV N D WG C+GKG+N LGK+L VR E Sbjct: 14 FNGPYRFLSNFWSCVVYL--DGKAYPSVEHAYQAAKTLDEGKRVWVRAAPTPGIAKRRGQQVTMREDWDRIKKRVMFKLVKDKFTRDESLGTKLLETRNVLLVEDNTWGDTYWGKCNGKGKNHLGKILMRVRHE 145
BLAST of mRNA_C-tenellus_contig10386.3.1 vs. uniprot
Match: UPI0019B1FDD9 (NADAR family protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI0019B1FDD9) HSP 1 Score: 96.3 bits (238), Expect = 7.310e-21 Identity = 58/144 (40.28%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 61 PDAIREFVGDYECFANTYRCSVSLCGDTETYPSVEHAFQASKTNDQGIRASIRVAKNGIEAKKAARVVKTTEEWKSSAEKTMEGLVRDKFRRNAKAREVLLSTGRVKLVFSNQHSDRVWGVC--DGK--GQNKLGKLLELVRAE 480 PD I F +Y+ +N Y C V+L D YPS+EHAFQA+KT++ R +++A + AK+ R V ++W++ M L+R KF R+A+ ++LL+TG +L+ N +DR WG D + GQN LG+LL VRAE Sbjct: 2 PDIITNFHSEYDFLSNFYLCPVAL--DDIDYPSIEHAFQAAKTDNPDERYKLQIASSPGAAKRLGRRVNLRDDWETVKLNIMLDLLRQKFTRHAEIGQLLLATGDAELIEGNTWNDRFWGAVLKDERWIGQNHLGRLLMQVRAE 143
BLAST of mRNA_C-tenellus_contig10386.3.1 vs. uniprot
Match: A0A5C5X511_9PLAN (Swarming motility protein YbiA n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X511_9PLAN) HSP 1 Score: 95.9 bits (237), Expect = 8.030e-21 Identity = 57/137 (41.61%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 70 IREFVGDYECFANTYRCSVSLCGDTETYPSVEHAFQASKTNDQGIRASIRVAKNGIEAKKAARVVKTTEEWKSSAEKTMEGLVRDKFRRNAKAREVLLSTGRVKLVFSNQHSDRVWGVCDGKGQNKLGKLLELVRAE 480 I F G+Y +N + SV L D ETYPSVEHA+QASKT D+ R I+ +++ AKK +K ++W S ME L+R KF +E L++TG +++ N D WGVC G G+N LG LL +R E Sbjct: 4 IMSFSGEYRWLSNFWAVSVVL--DRETYPSVEHAYQASKTTDRFERQLIQESQSAGHAKKLGSKLKERKDWDSIKLHIMEDLLRQKFS-VPDLKEQLIATGHAEIIEGNTWGDHFWGVCKGTGENHLGTLLMKIREE 137
BLAST of mRNA_C-tenellus_contig10386.3.1 vs. uniprot
Match: UPI0019AF29BC (NADAR family protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=UPI0019AF29BC) HSP 1 Score: 96.3 bits (238), Expect = 1.030e-20 Identity = 57/140 (40.71%), Postives = 80/140 (57.14%), Query Frame = 1 Query: 61 PDAIREFVGDYECFANTYRCSVSLCGDTETYPSVEHAFQASKTNDQGIRASIRVAKNGIEAKKAARVVKTTEEWKSSAEKTMEGLVRDKFRRNAKAREVLLSTGRVKLVFSNQHSDRVWGVCDGKGQNKLGKLLELVRAE 480 P I EF G+Y +N Y +V G YP+VEHA+Q++KT D R I V +AK+ R +K ++W+++ ME VR KF R+A R LL+TG L N D+VWGV +G G+N+LGK+L +R E Sbjct: 21 PAKIGEFQGEYRFLSNFYPATVEFEGIN--YPTVEHAYQSAKTLDIAERKRIAVLATPSDAKREGRKLKLRDDWETAKFDVMERCVRYKFTRDADLRAKLLATGYAVLEEGNNWGDQVWGVVNGVGENRLGKILMKLREE 158
BLAST of mRNA_C-tenellus_contig10386.3.1 vs. uniprot
Match: UPI001318EAA8 (Uncharacterized domain COG3236 / GTPcyclohydrolase II n=1 Tax=Xylella phage Bacata TaxID=2674970 RepID=UPI001318EAA8) HSP 1 Score: 95.5 bits (236), Expect = 1.350e-20 Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 1 Query: 70 IREFVGDYECFANTYRCSVSLCGDTETYPSVEHAFQASKTNDQGIRASIRVAKNGIEAKKAARVVKTTEEWKSSAEKTMEGLVRDKFRRNAKAREVLLSTGRVKLVFSNQHSDRVWGVCDGKGQNKLGKLLELVRAEAHAGKD 498 I F G + +N + SV++ + +Y +VEHAFQA+KT D+ R IR + AK+ + V E+W+ E M L+R KF + LL TG+ KLV N D WGVCDGKG+N+LG++L VR E A K+ Sbjct: 4 IGSFTGPHRFLSNFW--SVAIAFEGHSYRTVEHAFQAAKTFDEDERRRIRNEPDAGGAKRRGKTVTLREDWEEVKEDVMRNLLRQKFGTEP-LKSKLLKTGKSKLVEGNWWGDTYWGVCDGKGKNRLGEILMEVREELRAAKE 143 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10386.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10386.3.1 >prot_C-tenellus_contig10386.3.1 ID=prot_C-tenellus_contig10386.3.1|Name=mRNA_C-tenellus_contig10386.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=230bp MTMDPDKLRIIRTKPKIDSHPDAIREFVGDYECFANTYRCSVSLCGDTETback to top mRNA from alignment at C-tenellus_contig10386:3098..5555+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10386.3.1 ID=mRNA_C-tenellus_contig10386.3.1|Name=mRNA_C-tenellus_contig10386.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2458bp|location=Sequence derived from alignment at C-tenellus_contig10386:3098..5555+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10386:3098..5555+ >mRNA_C-tenellus_contig10386.3.1 ID=mRNA_C-tenellus_contig10386.3.1|Name=mRNA_C-tenellus_contig10386.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=690bp|location=Sequence derived from alignment at C-tenellus_contig10386:3098..5555+ (Choristocarpus tenellus KU2346)back to top |