mRNA_C-tenellus_contig10383.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10383.2.1
Unique NamemRNA_C-tenellus_contig10383.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig10383.2.1 vs. uniprot
Match: D7G0E9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0E9_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 3.990e-81
Identity = 145/199 (72.86%), Postives = 157/199 (78.89%), Query Frame = 1 
Query:    1 PLSAFYPTFNSMKHHMHXXXXXXXXIAGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPRQADEDDELHVHITGETEEQVEKAAKEVGSLLRPLDDEQNEHKQKQLRELALINGTLREEDYCHICGEKGHRQFECPKRAQQRSSAVDVRCAXXXXXXXPTRDCRLKQQKDDNDPNHEASLDKEYLNFMAELGD 597
            P + F  T    K ++           GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGP   DEDDELHV+++GETEE VEKAAKEVG LLRPLDDEQNEHKQKQLRELALINGTLREEDYC+ICGEKGHRQFECPKRAQ RS+ V+VRCA       PTRDC L + K    P HEASLDKEY++FMAELGD
Sbjct:  506 PPADFVKTKPHRKLYIPTDEYPGYNFIGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPMAIDEDDELHVYVSGETEEAVEKAAKEVGKLLRPLDDEQNEHKQKQLRELALINGTLREEDYCNICGEKGHRQFECPKRAQTRSATVEVRCALCGDTSHPTRDCLLHKSKAQGQPGHEASLDKEYMSFMAELGD 704
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BLAST of mRNA_C-tenellus_contig10383.2.1 vs. uniprot
Match: A0A835ZI00_9STRA (Branchpoint-bridging protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI00_9STRA)

HSP 1 Score: 238 bits (608), Expect = 1.890e-68
Identity = 123/175 (70.29%), Postives = 140/175 (80.00%), Query Frame = 1 
Query:   82 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARR-GPRQADEDDELHVHITGETEEQVEKAAKEVGSLLRPLDDEQNEHKQKQLRELALINGTLREEDYCHICGEKGHRQFECPKRAQQRSSAVDVRCAXXXXXXXPTRDCRLKQQKDDN--DPNHEASLDKEYLNFMAELGD 597
            GLIIGPRGNTQKRMERE+ CKIAIRG+GSVKEGARR G +  DE+D+LHV++ G+TEEQVEKAA EV  LLRP+DD+ NEHKQKQLRELALINGTLR++++CHICGEKGHRQ+ECPKRA Q   AV+VRCA       PTRDCR          DP   A+LD EYLNFMAELGD
Sbjct:  365 GLIIGPRGNTQKRMERESGCKIAIRGRGSVKEGARRTGVKSVDEEDDLHVYVQGDTEEQVEKAAAEVAGLLRPVDDDLNEHKQKQLRELALINGTLRDDEFCHICGEKGHRQYECPKRAAQSRPAVEVRCAICGDTSHPTRDCRQAPGGGGGAADPTKAAALDNEYLNFMAELGD 539
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BLAST of mRNA_C-tenellus_contig10383.2.1 vs. uniprot
Match: D0N463_PHYIT (Branchpoint-bridging protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N463_PHYIT)

HSP 1 Score: 223 bits (567), Expect = 5.770e-62
Identity = 117/183 (63.93%), Postives = 140/183 (76.50%), Query Frame = 1 
Query:   82 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPRQADEDDELHVHITGETEEQVEKAAKEVGSLLRPLDDEQNEHKQKQLRELALINGTLREEDYCHICGEKGHRQFECPKRAQQRS-SAVDVRCAXXXXXXXPTRDCRLKQQKDDNDPNHEASLDKEYLNFMAELGDKEATGTEAGG 627
            GLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++     ADE+D+LHV ITG+ EE ++KAAKEV SLL P+DD +N HKQKQLRELALINGTLR++DYCHICGEKGHRQ+ECP R  QR+  AV+V+CA       PTRDC  K++  +      A++DKEY  FM +LG+  AT T   G
Sbjct:  281 GLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDREEDLDKAAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAQRTFKAVNVKCAICGDSSHPTRDCTQKKKSAEES----AAIDKEYQQFMQQLGEAPATSTATNG 459
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BLAST of mRNA_C-tenellus_contig10383.2.1 vs. uniprot
Match: W2LI46_PHYPR (Branchpoint-bridging protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LI46_PHYPR)

HSP 1 Score: 221 bits (562), Expect = 1.210e-61
Identity = 116/183 (63.39%), Postives = 140/183 (76.50%), Query Frame = 1 
Query:   82 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPRQADEDDELHVHITGETEEQVEKAAKEVGSLLRPLDDEQNEHKQKQLRELALINGTLREEDYCHICGEKGHRQFECPKRAQQRS-SAVDVRCAXXXXXXXPTRDCRLKQQKDDNDPNHEASLDKEYLNFMAELGDKEATGTEAGG 627
            GLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++     ADE+D+LHV ITG+ EE ++KAAKEV SLL P+DD +N HKQKQLRELALINGTLR++DYCHICGEKGHRQ+ECP R   R+   V+V+CA       PTRDC  K++  + +    A++DKEY  FM +LG+  AT T A G
Sbjct:  280 GLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDREEDLDKAAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRTFKPVNVKCAICGDSSHPTRDCTQKKKSAEEN----AAIDKEYQQFMQQLGEAPATSTAANG 458
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BLAST of mRNA_C-tenellus_contig10383.2.1 vs. uniprot
Match: W2RDP1_PHYPN (Branchpoint-bridging protein n=22 Tax=Phytophthora TaxID=4783 RepID=W2RDP1_PHYPN)

HSP 1 Score: 221 bits (562), Expect = 3.220e-61
Identity = 116/183 (63.39%), Postives = 140/183 (76.50%), Query Frame = 1 
Query:   82 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPRQADEDDELHVHITGETEEQVEKAAKEVGSLLRPLDDEQNEHKQKQLRELALINGTLREEDYCHICGEKGHRQFECPKRAQQRS-SAVDVRCAXXXXXXXPTRDCRLKQQKDDNDPNHEASLDKEYLNFMAELGDKEATGTEAGG 627
            GLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++     ADE+D+LHV ITG+ EE ++KAAKEV SLL P+DD +N HKQKQLRELALINGTLR++DYCHICGEKGHRQ+ECP R   R+   V+V+CA       PTRDC  K++  + +    A++DKEY  FM +LG+  AT T A G
Sbjct:  280 GLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDREEDLDKAAKEVQSLLVPVDDTRNAHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRTFKPVNVKCAICGDSSHPTRDCTQKKKSAEEN----AAIDKEYQQFMQQLGEAPATSTAANG 458
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BLAST of mRNA_C-tenellus_contig10383.2.1 vs. uniprot
Match: A0A6A4FT44_9STRA (Branchpoint-bridging protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FT44_9STRA)

HSP 1 Score: 218 bits (554), Expect = 5.200e-60
Identity = 112/173 (64.74%), Postives = 137/173 (79.19%), Query Frame = 1 
Query:   82 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPRQADEDDELHVHITGETEEQVEKAAKEVGSLLRPLDDEQNEHKQKQLRELALINGTLREEDYCHICGEKGHRQFECPKRAQQRS-SAVDVRCAXXXXXXXPTRDCRLKQQKDDNDPNHEASLDKEYLNFMAELGD 597
            GLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++      DE+D+LHV +TG+ EE V+KAAKEV SLL P+DD +N HKQKQLRELALINGTLR++DYCHICGEKGHRQ+ECP R  QR+  AV+V+CA       PTRDC  K++  + +    A++DKEY +FM +LG+
Sbjct:  286 GLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKANGDENDDLHVLVTGDREEDVDKAAKEVQSLLVPVDDTKNSHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAQRTFKAVNVKCAICGDSSHPTRDCTQKKKSAEEN----AAIDKEYQSFMQQLGE 454
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BLAST of mRNA_C-tenellus_contig10383.2.1 vs. uniprot
Match: H3GZH0_PHYRM (Branchpoint-bridging protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GZH0_PHYRM)

HSP 1 Score: 215 bits (547), Expect = 4.870e-59
Identity = 112/176 (63.64%), Postives = 137/176 (77.84%), Query Frame = 1 
Query:   82 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPRQADEDDELHVHITGETEEQVEKAAKEVGSLLRPLDDEQNEHKQKQLRELALINGTLREEDYCHICGEKGHRQFECPKRAQQRS-SAVDVRCAXXXXXXXPTRDCRLKQQKDDNDPNHEASLDKEYLNFMAELGDKEA 606
            GLIIGPRGNTQKRME+ET+CKIAIRGKGSVKEG++     ADE+D+LHV ITG+ EE +E+AAKEV SLL P+DD +N HKQKQLRELALINGTLR++DYCHICGEKGHRQ+ECP R   R+  AV+V+CA       PTRDC  K +  + +    A++DKEY +FM +LG+  A
Sbjct:  267 GLIIGPRGNTQKRMEQETNCKIAIRGKGSVKEGSKGKKMNADENDDLHVLITGDNEENLERAAKEVQSLLVPVDDTKNSHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRTFKAVNVKCAICGDSSHPTRDCTQKGKSAEEN----AAIDKEYQSFMQQLGEAPA 438
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BLAST of mRNA_C-tenellus_contig10383.2.1 vs. uniprot
Match: G4YYE5_PHYSP (Branchpoint-bridging protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YYE5_PHYSP)

HSP 1 Score: 214 bits (546), Expect = 6.900e-59
Identity = 111/173 (64.16%), Postives = 136/173 (78.61%), Query Frame = 1 
Query:   82 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPRQADEDDELHVHITGETEEQVEKAAKEVGSLLRPLDDEQNEHKQKQLRELALINGTLREEDYCHICGEKGHRQFECPKRAQQRS-SAVDVRCAXXXXXXXPTRDCRLKQQKDDNDPNHEASLDKEYLNFMAELGD 597
            GLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++     ADE+D+LHV ITG+ EE ++KAAKEV SLL P+DD +N HKQKQLRELALINGTLR++DYCHICGEKGHRQ+ECP R   R+   V+V+CA       PTRDC  K++  + +    A++DKEY +FM +LG+
Sbjct:  287 GLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKTNADENDDLHVLITGDREEDLDKAAKEVQSLLVPVDDTKNSHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPNRDAHRTFKPVNVKCAICGDSSHPTRDCTQKRKSAEEN----AAIDKEYQSFMQQLGE 455
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BLAST of mRNA_C-tenellus_contig10383.2.1 vs. uniprot
Match: A0A0P1B7W4_PLAHL (Branchpoint-bridging protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7W4_PLAHL)

HSP 1 Score: 213 bits (542), Expect = 2.580e-58
Identity = 122/193 (63.21%), Postives = 149/193 (77.20%), Query Frame = 1 
Query:   82 GLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPRQADEDDELHVHITGETEEQVEKAAKEVGSLLRPLDDEQNEHKQKQLRELALINGTLREEDYCHICGEKGHRQFECPKRAQQRS-SAVDVRCAXXXXXXXPTRDCRLKQQKDDNDPNHEASLDKEYLNFMAELGDKE----ATGTEAGGASGSTA 645
            GLIIGPRGNTQKRMERET+CKIAIRGKGSVKEG++     ADE+D+LHV I G+ E+++E+AAKEV SLL P+DD +N HKQKQLRELALINGTLR+ DYCHICGEKGHRQ+ECP R  QR+ +A  ++CAXXXXXXX TRDC  KQ+  + +    A++DKEY  FM +LG+      AT T    A+G+ A
Sbjct:  280 GLIIGPRGNTQKRMERETNCKIAIRGKGSVKEGSKGKKMLADENDDLHVLIMGDREDEIERAAKEVQSLLVPVDDTKNSHKQKQLRELALINGTLRDADYCHICGEKGHRQWECPNRDAQRTFTAASIKCAXXXXXXXXTRDCTQKQKSAEEN----AAIDKEYQQFMQQLGEAPVATTATKTSEAAAAGAAA 468
[Close]
BLAST of mRNA_C-tenellus_contig10383.2.1 vs. uniprot
Match: A0A6G0WMD9_9STRA (Branchpoint-bridging protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMD9_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.450e-56
Identity = 119/206 (57.77%), Postives = 144/206 (69.90%), Query Frame = 1 
Query:   16 YPTFNSMKHHMHXXXXXXXXIAGLIIGPRGNTQKRMERETDCKIAIRGKGSVKEGARRGPRQADEDDELHVHITGETEEQVEKAAKEVGSLLRPLDDEQNEHKQKQLRELALINGTLREEDYCHICGEKGHRQFECPKRAQQRSSAVDVRCAXXXXXXXPTRDCRLKQQKDDNDPNHEASLDKEYLNFMAELGDKEATGTEAGGAS 633
            YPT+N                 GLIIGPRGNTQKRME+E +C+IAIRG+GSVKEG++     AD+ ++LHV ITGE EE +E+AA EV  LL P+DD  N HKQKQLRELALINGTLR++DYCHICGEKGHRQ+ECP R ++    VDVRC XXXXXXXPT DC  K      D   +A++DKEYL+FM +LG+ + T    G  S
Sbjct:  263 YPTYN---------------FIGLIIGPRGNTQKRMEKEFNCRIAIRGRGSVKEGSKGKKITADDHEDLHVLITGEREEDIERAAAEVAKLLEPVDDTNNSHKQKQLRELALINGTLRDDDYCHICGEKGHRQWECPSR-EKTFKPVDVRCXXXXXXXXPTSDCTQK-----GDAQEKATIDKEYLSFMEQLGESKQTVISHGNGS 447
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10383.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0E9_ECTSI3.990e-8172.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZI00_9STRA1.890e-6870.29Branchpoint-bridging protein (Fragment) n=1 Tax=Tr... [more]
D0N463_PHYIT5.770e-6263.93Branchpoint-bridging protein n=2 Tax=Phytophthora ... [more]
W2LI46_PHYPR1.210e-6163.39Branchpoint-bridging protein n=6 Tax=Phytophthora ... [more]
W2RDP1_PHYPN3.220e-6163.39Branchpoint-bridging protein n=22 Tax=Phytophthora... [more]
A0A6A4FT44_9STRA5.200e-6064.74Branchpoint-bridging protein n=5 Tax=Phytophthora ... [more]
H3GZH0_PHYRM4.870e-5963.64Branchpoint-bridging protein n=1 Tax=Phytophthora ... [more]
G4YYE5_PHYSP6.900e-5964.16Branchpoint-bridging protein n=1 Tax=Phytophthora ... [more]
A0A0P1B7W4_PLAHL2.580e-5863.21Branchpoint-bridging protein n=1 Tax=Plasmopara ha... [more]
A0A6G0WMD9_9STRA2.450e-5657.77Branchpoint-bridging protein n=1 Tax=Aphanomyces e... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10383contigC-tenellus_contig10383:2060..5395 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G0E9
Preferred nameSF1
PFAMsKH_1,RRM_1,SF1-HH,zf-CCHC
Model size1560
Max annot lvl2759|Eukaryota
KEGG koko:K13095,ko:K13126
KEGG Pathwayko03013,ko03015,ko03018,map03013,map03015,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000243,GO:0000245,GO:0000375,GO:0000377,GO:0000380,GO:0000389,GO:0000398,GO:0001101,GO:0003006,GO:0003674,GO:0003676,GO:0003712,GO:0003714,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007275,GO:0007530,GO:0007548,GO:0008150,GO:0008152,GO:0008285,GO:0008380,GO:0008406,GO:0008584,GO:0009719,GO:0009725,GO:0009737,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010556,GO:0010558,GO:0010605,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0019216,GO:0019218,GO:0019219,GO:0019222,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030238,GO:0030575,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033327,GO:0033993,GO:0034622,GO:0034641,GO:0036002,GO:0042127,GO:0042221,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045131,GO:0045137,GO:0045292,GO:0045934,GO:0046483,GO:0046546,GO:0046661,GO:0046890,GO:0048513,GO:0048519,GO:0048523,GO:0048608,GO:0048660,GO:0048662,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0061458,GO:0065003,GO:0065007,GO:0070013,GO:0071004,GO:0071010,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097305,GO:0140110,GO:1901360,GO:1901363,GO:1901700,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2001141
Exons4
Evalue6.53e-82
EggNOG OGsCOG5176@1|root,KOG0119@2759|Eukaryota
Descriptionpre-mRNA branch point binding
Cds size1560
COG categoryA
BRITEko00000,ko00001,ko03019,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789128.8994596-CDS-C-tenellus_contig10383:2059..22841680789128.8994596-CDS-C-tenellus_contig10383:2059..2284Choristocarpus tenellus KU2346CDSC-tenellus_contig10383 2060..2284 -
1680789128.917571-CDS-C-tenellus_contig10383:3062..40291680789128.917571-CDS-C-tenellus_contig10383:3062..4029Choristocarpus tenellus KU2346CDSC-tenellus_contig10383 3063..4029 -
1680789128.9303362-CDS-C-tenellus_contig10383:4499..46031680789128.9303362-CDS-C-tenellus_contig10383:4499..4603Choristocarpus tenellus KU2346CDSC-tenellus_contig10383 4500..4603 -
1680789128.9394596-CDS-C-tenellus_contig10383:5131..53951680789128.9394596-CDS-C-tenellus_contig10383:5131..5395Choristocarpus tenellus KU2346CDSC-tenellus_contig10383 5132..5395 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10383.2.1prot_C-tenellus_contig10383.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10383 2060..5395 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10383.2.1

>prot_C-tenellus_contig10383.2.1 ID=prot_C-tenellus_contig10383.2.1|Name=mRNA_C-tenellus_contig10383.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=520bp
PLSAFYPTFNSMKHHMHTHQHTHTHIAGLIIGPRGNTQKRMERETDCKIA
IRGKGSVKEGARRGPRQADEDDELHVHITGETEEQVEKAAKEVGSLLRPL
DDEQNEHKQKQLRELALINGTLREEDYCHICGEKGHRQFECPKRAQQRSS
AVDVRCAICGDTSHPTRDCRLKQQKDDNDPNHEASLDKEYLNFMAELGDK
EATGTEAGGASGSTAMGTSTSTGVSTGTPAPQVPTSSAPGTKAPIVTHVV
WTPPKPQPVQSLPQQPQQPLQQLPHQGYPAPMPVPMMMPPPPMQPMYPPP
VPMPQVPYQQPPLLQQQGAYGMPLRPPPPPPPLQGAVSTNTGAPPSVPPL
AVSTPAPPAAAPAPALVPTSAPAPAPVPVPAPAQAPGSGGYDFSLPPPSV
PALPAPIYSAQPPQFSSSLPMPLPGSWSQAPPPMPPMPQFGGDVPCPTPM
RPLNTIWITGYIPPPLPPGSNSTAPQWPPAPQYVPPPLPPGSDPPLPPTS
NPPLPPVFDAPLPGQPPLPP
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mRNA from alignment at C-tenellus_contig10383:2060..5395-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10383.2.1 ID=mRNA_C-tenellus_contig10383.2.1|Name=mRNA_C-tenellus_contig10383.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3336bp|location=Sequence derived from alignment at C-tenellus_contig10383:2060..5395- (Choristocarpus tenellus KU2346)
CCCCTCTCTGCCTTTTACCCAACTTTCAACTCCATGAAACACCACATGCA
CACACATCAACACACACACACACACATTGCAGGACTGATTATTGGGCCCA
GGGGCAACACTCAGAAGCGCATGGAGCGAGAGACAGACTGCAAGATTGCT
ATCCGGGGGAAGGGGAGTGTTAAGGAGGGTGCCAGGAGGGGGCCTAGACA
AGCAGATGAGGATGATGAGCTTCACGTGCACATTACAGGGGAGACGGAAG
AGCAGGTTGAGAAGGTCAGTTTTTGTTCATATGGTGTGTTTCATTTAAAT
GGTTGTTGAGTGTTTTTTTTTCTGTCCTGCATACTTCATTGTTGGGTTGT
GTTGTGTGTGTATGTTACAGGAGCTTGAAGCTTTCAGAGCAAGTTGATGC
CTGCAGGATGAGGTGTTGCATGAGGTCCAGTATGGAGGATTGATCGTTTT
GTTTTTCCATTTGATAGTGTGCCGTGATTTGCAGCACTTTGAACGGCTTG
TGTTTCAAATGAAGATTGTTTACATTAACAAGTTTTTTTTTTATGTGGGG
GGCTTCCTTCAGAGATTCCATGGTCCTTAGTTTTTGTGTCAAATTGCAGT
GAGCACAACAGACATGGGTGAGTGTATTCCAGCAAAGGTACAGATCCATT
CTCGAGATACAAAGATTCATTCTTGAATACCCCATATTTTTTGTTTTGCA
ATCATTATACTCGCCCCACCCCTCGTGCCTGTGTAAGGTCACTTGCCCCC
AGTTTTCTCAATCAATGCATCAAACTGCCATTTCTCAAATAGGCAGCCAA
GGAGGTGGGTTCATTACTGCGTCCCTTGGATGATGAGCAGAATGAACACA
AGCAGAAGCAACTCAGGGAATTGGCACTCATCAATGGTACCCTCAGGTAG
GCTGTTGTTCTTGTTGCTATGACTGTGCGGTGGGTGGGATGTATTCAGGG
TAAGGGTGTTGAGGGCAATGGGAGAGACTAGAGTTTAGATTAGGGTGAGG
GGGTTGAGGAGGGGAGATCTAGGCATGAGTCATGTCTTGGGGTAAGCAAA
TGGAGGTTCAGCAGTGTTTGGTTATGAGTGTGAGTAATGGGAACTAGGAA
CTTTAGGGTAATGCCTTTTATTACTTAAATGAAGAGAAGGAGTGTCTGTC
TTGATCCCCCTACCCCCCCAACCTCTTTCCACAAAATGACTAGAAAGTAT
TGTAAGCTTTTGACAATGTAACCGCTGATATCCCTCAGGGGAGTTTGCTG
GGGAGATTTGCTTAGTCAGTTGTAGTAATATTTTGGTATTGTGTTACTTT
GATTTTTCTTTTTGTTCACCTCCCATTTCACTTTTTTCCGACTCACGACT
TTGATGAACGTTTTAGGGAAGAGGACTACTGCCACATTTGTGGGGAGAAG
GGTCACCGCCAATTTGAATGTCCAAAGCGCGCTCAGCAGCGATCATCGGC
AGTGGATGTGAGGTGTGCCATCTGTGGCGACACCTCCCACCCCACTCGTG
ACTGTCGCCTTAAGCAGCAGAAGGATGATAACGACCCCAACCATGAGGCA
TCCCTGGACAAGGAGTACCTCAACTTCATGGCCGAACTTGGAGACAAAGA
AGCGACTGGCACTGAGGCTGGGGGTGCAAGTGGTTCCACTGCGATGGGGA
CTAGCACTAGTACCGGAGTCAGCACTGGTACCCCAGCCCCACAAGTCCCA
ACCTCATCCGCTCCGGGTACCAAGGCCCCGATTGTCACACATGTGGTTTG
GACCCCACCAAAGCCACAACCAGTTCAGTCCCTCCCTCAGCAGCCACAGC
AGCCTCTGCAGCAGTTGCCCCACCAGGGCTATCCGGCACCTATGCCTGTG
CCCATGATGATGCCACCGCCCCCAATGCAACCAATGTACCCTCCGCCAGT
ACCGATGCCACAGGTCCCTTACCAGCAACCGCCCTTGCTGCAGCAACAGG
GAGCGTACGGCATGCCCCTCCGCCCCCCACCGCCTCCCCCTCCCCTCCAG
GGGGCTGTGTCCACGAACACAGGAGCACCACCATCTGTGCCGCCACTGGC
GGTTTCCACTCCTGCGCCACCAGCAGCTGCACCAGCGCCAGCGCTGGTGC
CCACGTCTGCACCTGCGCCTGCGCCTGTGCCTGTGCCTGCGCCTGCGCAA
GCACCGGGGTCTGGGGGGTATGATTTCTCCCTCCCTCCACCTTCTGTGCC
TGCGCTGCCTGCACCAATTTACTCTGCCCAACCCCCGCAGTTCTCATCTT
CTTTGCCGATGCCTCTGCCGGGGAGTTGGTCCCAGGCTCCTCCACCTATG
CCGCCGATGCCACAGTTTGGAGGTGATGTTCCTGTCCTTGCAATGTGTAT
GAAGCCCCCCTAAACCTCTGAACCTCCCATCCTTCCTTCAAGCTCTACTG
AGGGATGTACAAATGGTGTTGGTACAGCCCATGCAGTAGTGGGAGGTGTA
TTTGCTGTTGTAGGTCAGGTGCTTGGTGATCCACTTTTTGATACTCATGT
AATCCTCTGGTGTGTGTAAAATCTTTTGGGGGAGATGGACAGTATGTTTT
TTTTGGCATGTGCAGGGTTTGTGCAGCATGCATAGCTCTACTAGTGTAGG
TCGTTTGTTCTTGGTGTCTGAACTGCTGCGTGTGTGCATTCCACCAGAAG
GAACTTACGTAATGCCATGGAAATTGATACTTGCTCAGGGAAGCAATGCC
CTTAAAAAATCTATGTAGGATATTTGTGTCACATTTGGAGGGTGTATGCC
AATGTTGGTAGTCTTGTGGTTGCATTACTTGGACATGGTAAGCACAAGAG
ACTCTTTAACATGATAGTTTCTTTGTGATGCCACACATGATTGCAATGTG
ATCATTACTATGTTTCCACCCTAGGGCTACTCTTCAAGTTGAACAGGGCT
AAGGAACATGATAGTTTTTTTCCAGTTTGTATCCCAGTTTTTGAACCCAT
GCTAGGATTGTGTGTGATAGACACTGCTCACTATCAAGTACCTCAATAGA
TGATACCATTGAATTGTTCAGCAATCACCCCTAGCCCCACCCCCTGTCGT
GTCAATCGTCTTCAATTATAGGTCTTGATCACTTGTAATTTTCCCTGAAT
TCATCCAAAAGTGCCCCACCCCAATGCGCCCCCTTAACACTATCTGGATC
ACAGGTTACATCCCACCACCTCTTCCTCCTGGGAGCAACAGCACTGCACC
CCAGTGGCCTCCAGCTCCACAGTATGTTCCTCCCCCGTTGCCACCTGGAA
GTGACCCTCCTCTTCCACCAACCTCCAATCCTCCACTGCCGCCGGTGTTT
GATGCTCCACTGCCTGGTCAACCTCCGCTTCCCCCT
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Coding sequence (CDS) from alignment at C-tenellus_contig10383:2060..5395-

>mRNA_C-tenellus_contig10383.2.1 ID=mRNA_C-tenellus_contig10383.2.1|Name=mRNA_C-tenellus_contig10383.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1560bp|location=Sequence derived from alignment at C-tenellus_contig10383:2060..5395- (Choristocarpus tenellus KU2346)
CCCCTCTCTGCCTTTTACCCAACTTTCAACTCCATGAAACACCACATGCA
CACACATCAACACACACACACACACATTGCAGGACTGATTATTGGGCCCA
GGGGCAACACTCAGAAGCGCATGGAGCGAGAGACAGACTGCAAGATTGCT
ATCCGGGGGAAGGGGAGTGTTAAGGAGGGTGCCAGGAGGGGGCCTAGACA
AGCAGATGAGGATGATGAGCTTCACGTGCACATTACAGGGGAGACGGAAG
AGCAGGTTGAGAAGGCAGCCAAGGAGGTGGGTTCATTACTGCGTCCCTTG
GATGATGAGCAGAATGAACACAAGCAGAAGCAACTCAGGGAATTGGCACT
CATCAATGGTACCCTCAGGGAAGAGGACTACTGCCACATTTGTGGGGAGA
AGGGTCACCGCCAATTTGAATGTCCAAAGCGCGCTCAGCAGCGATCATCG
GCAGTGGATGTGAGGTGTGCCATCTGTGGCGACACCTCCCACCCCACTCG
TGACTGTCGCCTTAAGCAGCAGAAGGATGATAACGACCCCAACCATGAGG
CATCCCTGGACAAGGAGTACCTCAACTTCATGGCCGAACTTGGAGACAAA
GAAGCGACTGGCACTGAGGCTGGGGGTGCAAGTGGTTCCACTGCGATGGG
GACTAGCACTAGTACCGGAGTCAGCACTGGTACCCCAGCCCCACAAGTCC
CAACCTCATCCGCTCCGGGTACCAAGGCCCCGATTGTCACACATGTGGTT
TGGACCCCACCAAAGCCACAACCAGTTCAGTCCCTCCCTCAGCAGCCACA
GCAGCCTCTGCAGCAGTTGCCCCACCAGGGCTATCCGGCACCTATGCCTG
TGCCCATGATGATGCCACCGCCCCCAATGCAACCAATGTACCCTCCGCCA
GTACCGATGCCACAGGTCCCTTACCAGCAACCGCCCTTGCTGCAGCAACA
GGGAGCGTACGGCATGCCCCTCCGCCCCCCACCGCCTCCCCCTCCCCTCC
AGGGGGCTGTGTCCACGAACACAGGAGCACCACCATCTGTGCCGCCACTG
GCGGTTTCCACTCCTGCGCCACCAGCAGCTGCACCAGCGCCAGCGCTGGT
GCCCACGTCTGCACCTGCGCCTGCGCCTGTGCCTGTGCCTGCGCCTGCGC
AAGCACCGGGGTCTGGGGGGTATGATTTCTCCCTCCCTCCACCTTCTGTG
CCTGCGCTGCCTGCACCAATTTACTCTGCCCAACCCCCGCAGTTCTCATC
TTCTTTGCCGATGCCTCTGCCGGGGAGTTGGTCCCAGGCTCCTCCACCTA
TGCCGCCGATGCCACAGTTTGGAGGTGATGTTCCTTGCCCCACCCCAATG
CGCCCCCTTAACACTATCTGGATCACAGGTTACATCCCACCACCTCTTCC
TCCTGGGAGCAACAGCACTGCACCCCAGTGGCCTCCAGCTCCACAGTATG
TTCCTCCCCCGTTGCCACCTGGAAGTGACCCTCCTCTTCCACCAACCTCC
AATCCTCCACTGCCGCCGGTGTTTGATGCTCCACTGCCTGGTCAACCTCC
GCTTCCCCCT
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