mRNA_C-tenellus_contig10377.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10377.1.1 vs. uniprot
Match: D7FQ73_ECTSI (DNA double-strand break repair rad50 ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ73_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 2.220e-19 Identity = 47/72 (65.28%), Postives = 61/72 (84.72%), Query Frame = 1 Query: 1 RETQAVLEG-LGVSTDVLTRVVFQGQHHMHGLLESTDARLKEELSVLVPMEMWQDMASRSREMARKCGEDRA 213 +ETQ VLE LG+S+ VL R +FQGQHH++GLLESTDA+LKE+L++LVPM++WQD+ASRSR ARK E+ A Sbjct: 910 KETQVVLEDELGLSSHVLGRGIFQGQHHLNGLLESTDAQLKEDLALLVPMDLWQDLASRSRVTARKSDEEAA 981
BLAST of mRNA_C-tenellus_contig10377.1.1 vs. uniprot
Match: A0A7S3V904_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V904_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 5.740e-14 Identity = 36/65 (55.38%), Postives = 54/65 (83.08%), Query Frame = 1 Query: 1 RETQ-AVLEGLGVSTDVLTRVVFQGQHHMHGLLESTDARLKEELSVLVPMEMWQDMASRSREMAR 192 +ETQ A+ E LGV+ VL+R +F GQH ++GLLE++DA+LKEELS++VP+++WQD A+R+R+ R Sbjct: 861 KETQNAIDEVLGVNNQVLSRTIFHGQHTINGLLEASDAKLKEELSIIVPLKLWQDAAARARKQGR 925
BLAST of mRNA_C-tenellus_contig10377.1.1 vs. uniprot
Match: A0A836CHZ6_9STRA (Metallophos domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ6_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.470e-13 Identity = 42/75 (56.00%), Postives = 51/75 (68.00%), Query Frame = 1 Query: 1 RETQAVLE-GLGVSTDVLTRVVFQGQHHMHG-----------LLESTDARLKEELSVLVPMEMWQDMASRSREMA 189 R+TQAVLE LG+ +VL R +FQGQHHM+G LLESTDAR KEELS+L+PM+ WQD A +R A Sbjct: 864 RDTQAVLERDLGLRAEVLRRTLFQGQHHMYGERLERVRGDPGLLESTDARFKEELSLLMPMDFWQDAARSARRAA 938
BLAST of mRNA_C-tenellus_contig10377.1.1 vs. uniprot
Match: A0A1Z5K5S0_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5S0_FISSO) HSP 1 Score: 72.4 bits (176), Expect = 5.070e-13 Identity = 36/79 (45.57%), Postives = 58/79 (73.42%), Query Frame = 1 Query: 1 RETQAVL-EGLGVSTDVLTRVVFQGQHHMHGLLESTDARLKEELSVLVPMEMWQDMASRSREMARKCGEDRARLAAQVS 234 +ETQ V+ E LG+S ++L+R +F GQH ++GLLESTD +LK+ELS++VP+++WQ AS +R+ + + A+L +S Sbjct: 634 QETQKVINEKLGISAELLSRTLFHGQHSLNGLLESTDTKLKDELSLIVPLDIWQKAASLARKQSSAASKVEAQLDGMIS 712
BLAST of mRNA_C-tenellus_contig10377.1.1 vs. uniprot
Match: A0A7S4R4E5_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R4E5_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 6.830e-13 Identity = 34/79 (43.04%), Postives = 56/79 (70.89%), Query Frame = 1 Query: 1 RETQAVL-EGLGVSTDVLTRVVFQGQHHMHGLLESTDARLKEELSVLVPMEMWQDMASRSREMARKCGEDRARLAAQVS 234 +ETQA++ E LG + D+L R +F GQH ++GLLE+TDA+ KEELS +VP+EMW++ A+ +R R+ + + +++ Sbjct: 116 KETQAIIDEHLGATRDILARTIFHGQHSINGLLEATDAKFKEELSYVVPLEMWREAATYARSTHRRLTSEADEMGGRIN 194
BLAST of mRNA_C-tenellus_contig10377.1.1 vs. uniprot
Match: A0A1Z5KEQ1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEQ1_FISSO) HSP 1 Score: 70.9 bits (172), Expect = 1.770e-12 Identity = 36/78 (46.15%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 1 RETQAVL-EGLGVSTDVLTRVVFQGQHHMHGLLESTDARLKEELSVLVPMEMWQDMASRSREMARKCGEDRARLAAQV 231 +ETQ ++ E LG+S ++L+R +F GQH ++GLLESTD +LK+ELS++VP+++WQ AS +ARK +++ AQ+ Sbjct: 652 QETQKIINEKLGISAELLSRTLFHGQHSLNGLLESTDTKLKDELSLIVPLDIWQKAAS----LARKKSSSASKVEAQL 725
BLAST of mRNA_C-tenellus_contig10377.1.1 vs. uniprot
Match: A0A7S0Y8J8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8J8_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.390e-12 Identity = 34/54 (62.96%), Postives = 46/54 (85.19%), Query Frame = 1 Query: 1 RETQAVLEG-LGVSTDVLTRVVFQGQHHMHGLLESTDARLKEELSVLVPMEMWQ 159 +ETQAV+E LGV+ +LTRV F GQH M+ LLE+TD++LK+ELS+LVP+E+WQ Sbjct: 311 KETQAVVEAKLGVNAQILTRVAFYGQHGMNDLLEATDSKLKDELSMLVPLELWQ 364
BLAST of mRNA_C-tenellus_contig10377.1.1 vs. uniprot
Match: A0A7S2KNW3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KNW3_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 8.400e-12 Identity = 32/53 (60.38%), Postives = 43/53 (81.13%), Query Frame = 1 Query: 1 RETQ-AVLEGLGVSTDVLTRVVFQGQHHMHGLLESTDARLKEELSVLVPMEMW 156 ++TQ A+ E LGV +L R +F GQH M+GLLE+TDA+LKEELSV+VP+E+W Sbjct: 276 KDTQIAINESLGVGPQILARTIFHGQHAMNGLLEATDAKLKEELSVIVPLELW 328
BLAST of mRNA_C-tenellus_contig10377.1.1 vs. uniprot
Match: A0A448ZKB3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKB3_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.570e-11 Identity = 34/65 (52.31%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 1 RETQAVLEG-LGVSTDVLTRVVFQGQHHMHGLLESTDARLKEELSVLVPMEMWQDMASRSREMAR 192 +ETQ+ +E LGV +L+RV F GQH M+ LLE+TD++LK+ELS+LVP+++WQ S +R AR Sbjct: 683 KETQSTIEEKLGVDAHILSRVAFYGQHGMNDLLEATDSKLKDELSLLVPLDLWQQATSTARAKAR 747
BLAST of mRNA_C-tenellus_contig10377.1.1 vs. uniprot
Match: A0A1E7FVC2_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVC2_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.020e-10 Identity = 33/61 (54.10%), Postives = 47/61 (77.05%), Query Frame = 1 Query: 1 RETQAVLEG-LGVSTDVLTRVVFQGQHHMHGLLESTDARLKEELSVLVPMEMWQDMASRSR 180 +ETQA++E LGV +LTRV F GQH M+ LLE+TD +LK+ELS++VP+++WQ S +R Sbjct: 501 KETQALVEEKLGVDAHILTRVAFYGQHGMNDLLEATDTKLKDELSLVVPLDLWQQANSVAR 561 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10377.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10377.1.1 >prot_C-tenellus_contig10377.1.1 ID=prot_C-tenellus_contig10377.1.1|Name=mRNA_C-tenellus_contig10377.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=81bp RETQAVLEGLGVSTDVLTRVVFQGQHHMHGLLESTDARLKEELSVLVPMEback to top mRNA from alignment at C-tenellus_contig10377:126..851+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10377.1.1 ID=mRNA_C-tenellus_contig10377.1.1|Name=mRNA_C-tenellus_contig10377.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=726bp|location=Sequence derived from alignment at C-tenellus_contig10377:126..851+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10377:126..851+ >mRNA_C-tenellus_contig10377.1.1 ID=mRNA_C-tenellus_contig10377.1.1|Name=mRNA_C-tenellus_contig10377.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=243bp|location=Sequence derived from alignment at C-tenellus_contig10377:126..851+ (Choristocarpus tenellus KU2346)back to top |