mRNA_C-tenellus_contig10351.1.2 (mRNA) Choristocarpus tenellus KU2346
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-tenellus_contig10351.1.2 vs. uniprot
Match: D7FT73_ECTSI (Similar to spermatogenesis associated factor SPAF n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT73_ECTSI) HSP 1 Score: 396 bits (1018), Expect = 7.670e-123 Identity = 205/246 (83.33%), Postives = 224/246 (91.06%), Query Frame = 2 Query: 2 EVVEWPLKFPQAFARMGISPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERALQSLFKRARAAAPTIVFFDEVDALACKRGGG--TGAGATERVLTQLLTELDGIQLLKRVVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDLASREEILRISLGSVPTSEDVDSRLLADKTAGFSGAEVVALCREASICALEEDRSAERVCQRHLLLALQQIRPQITPSVLAAYDAFR 733 EVVEWPL+ P+AF RMG+SPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERA+Q+LFKRARAAAPTI+FFDEVDALACKRGGG TGAGATERVLTQLLTELDGIQ +KR+VVVAATNRPDVIDPALLRPGRLDRLVYVPPPD+ SR EILR+SL VP + DV+ LA +T GFSGAEVVALCREASICALEEDRSA +V Q HLL AL Q+RPQITP+VLA+Y +F+ Sbjct: 875 EVVEWPLRHPEAFLRMGMSPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERAMQALFKRARAAAPTIIFFDEVDALACKRGGGGETGAGATERVLTQLLTELDGIQPVKRLVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDVLSRREILRLSLAKVPCAGDVEHEALARRTEGFSGAEVVALCREASICALEEDRSATQVRQAHLLEALGQMRPQITPAVLASYASFQ 1120
BLAST of mRNA_C-tenellus_contig10351.1.2 vs. uniprot
Match: W7TTL3_9STRA (Spermatogenesis-associated protein 5 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTL3_9STRA) HSP 1 Score: 328 bits (840), Expect = 2.890e-103 Identity = 177/255 (69.41%), Postives = 202/255 (79.22%), Query Frame = 2 Query: 2 EVVEWPLKFPQAFARMGISPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERALQSLFKRARAAAPTIVFFDEVDALACKRGGGTGAGATERVLTQLLTELDGIQLLKRVVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDLASREEILRISLGSVPTSED---------VDSRLLADKTAGFSGAEVVALCREASICALEEDRSAERVCQ-RHLLLALQQIRPQITPSVLAAYDAFRG 736 E VEWPL P+AF RMGI+PP+GVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESE+ALQ LFK+ARAAAPT+VFFDEVDALA +RG G A+ERVL+QLLTELDG+Q L+RVVVVAATNRPD++DPALLRPGR+DR VYVPPPDLASR EIL+I+L VPT VD LA +T GFSGAEVVAL REA++CA+EED R+ + RH AL + QITP +L Y + G Sbjct: 226 ECVEWPLTRPEAFVRMGIAPPKGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESEKALQGLFKKARAAAPTVVFFDEVDALAGRRGDGEDCKASERVLSQLLTELDGVQPLRRVVVVAATNRPDLLDPALLRPGRIDRRVYVPPPDLASRREILKIALRGVPTESPEGEASEGAGVDLEELARRTEGFSGAEVVALSREAALCAVEEDPVHARLLRGRHFEQALAGWQRQITPRMLEYYRRYAG 480
BLAST of mRNA_C-tenellus_contig10351.1.2 vs. uniprot
Match: A0A2P4X318_9STRA (ATPase AFG2 protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X318_9STRA) HSP 1 Score: 315 bits (807), Expect = 4.550e-101 Identity = 154/244 (63.11%), Postives = 198/244 (81.15%), Query Frame = 2 Query: 2 EVVEWPLKFPQAFARMGISPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERALQSLFKRARAAAPTIVFFDEVDALACKRGGGTGAGATERVLTQLLTELDGIQLLKRVVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDLASREEILRISLGSVPTSEDVDSRLLADKTAGFSGAEVVALCREASICALEEDRSAERVCQRHLLLALQQIRPQITPSVLAAYDAFR 733 E VEWPL+ P+AF RMGI PP+GVLLYGPPGCSKTL A+ALATESGMNF+A+KGPEL SKW+GESE+ ++ +F++ARAA+PT+VFFDE+DALA RG G +GA++RVL+QLLTELDG++ LKRV+VVAATNRPD++DPAL+RPGR+DR +YV PPD+ +RE+IL+I P + DV LA TA FSGAE+ ALCREA++ A+EEDR+A V +RH + AL + PQI +LA ++ FR Sbjct: 36 EAVEWPLQHPEAFTRMGIRPPKGVLLYGPPGCSKTLAAKALATESGMNFIAIKGPELFSKWVGESEQQVREVFRKARAASPTVVFFDEIDALASTRGSGGSSGASDRVLSQLLTELDGLEPLKRVLVVAATNRPDLLDPALMRPGRIDRALYVSPPDVPAREQILQIHTRKTPLASDVSMTELAIATARFSGAELQALCREAALHAVEEDRAAANVAKRHFVRALSVVTPQIDDRMLAFFERFR 279
BLAST of mRNA_C-tenellus_contig10351.1.2 vs. uniprot
Match: A0A4D9CZ55_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ55_9STRA) HSP 1 Score: 327 bits (837), Expect = 4.390e-99 Identity = 176/255 (69.02%), Postives = 202/255 (79.22%), Query Frame = 2 Query: 2 EVVEWPLKFPQAFARMGISPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERALQSLFKRARAAAPTIVFFDEVDALACKRGGGTGAGATERVLTQLLTELDGIQLLKRVVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDLASREEILRISLGSVPTSED---------VDSRLLADKTAGFSGAEVVALCREASICALEEDRSAERVCQ-RHLLLALQQIRPQITPSVLAAYDAFRG 736 E VEWPL P+AF RMGI+PP+GVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESE+ALQ LFK+ARAAAPT+VFFDEVDALA +RG G A+ERVL+QLLTELDG+Q L+RVVVVAATNRPD++DPALLRPGR+DR VYVPPPDLASR EIL+I+L VPT +D LA +T GFSGAEVVAL REA++CA+EED R+ + RH AL + QITP +L Y + G Sbjct: 559 ECVEWPLTRPEAFVRMGIAPPKGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESEKALQGLFKKARAAAPTVVFFDEVDALAGRRGDGEDCKASERVLSQLLTELDGVQPLRRVVVVAATNRPDLLDPALLRPGRIDRRVYVPPPDLASRREILKIALRGVPTESPEGEASEGAGLDLEELARRTEGFSGAEVVALSREAALCAVEEDPVHARLLRGRHFEQALAGWQRQITPRMLEYYRRYAG 813
BLAST of mRNA_C-tenellus_contig10351.1.2 vs. uniprot
Match: A0A0W8DS50_PHYNI (M96 mating-specific protein family n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DS50_PHYNI) HSP 1 Score: 312 bits (799), Expect = 1.190e-98 Identity = 154/246 (62.60%), Postives = 198/246 (80.49%), Query Frame = 2 Query: 2 EVVEWPLKFPQAFARMGISPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERALQSLFKRARAAAPTIVFFDEVDALACKRGGGTGAGATERVLTQLLTELDGIQLLKRVVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDLASREEILRISLGSVPTSEDVDSRLLADKTAGFSGAEVVALCREASICALEEDRSAERVCQRHLLLALQQIRPQITPSVLAAYDAFRGA 739 E VEWPL+ P+AF RMGI PP+GVLLYGPPGCSKTL A+ALATESGMNF+A+KGPEL SKW+GESE+ ++ +F++AR A+PT+VFFDE+DALA RG G +GA++RVL+QLLTELDG++ LKRV+VVAATNRPD++DPAL+RPGR+DR +YV PPD+ +RE+IL+I P + DV LA TA FSGAE+ ALCREA++ A+EEDR+A V +RH + AL + PQI +LA ++ FR A Sbjct: 120 EAVEWPLQHPEAFTRMGIRPPKGVLLYGPPGCSKTLAAKALATESGMNFIAIKGPELFSKWVGESEQQVREVFRKARGASPTVVFFDEIDALASMRGTGGSSGASDRVLSQLLTELDGLEPLKRVLVVAATNRPDLLDPALMRPGRIDRALYVSPPDVPAREQILQIHTRKTPLASDVSLAELAIATARFSGAELQALCREAALHAVEEDRAAVNVAKRHFVRALAVVTPQIDDRMLAFFERFRMA 365
BLAST of mRNA_C-tenellus_contig10351.1.2 vs. uniprot
Match: K3W9Z8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W9Z8_GLOUD) HSP 1 Score: 317 bits (811), Expect = 5.760e-98 Identity = 159/246 (64.63%), Postives = 202/246 (82.11%), Query Frame = 2 Query: 2 EVVEWPLKFPQAFARMGISPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERALQSLFKRARAAAPTIVFFDEVDALACKRGGGTGAGA--TERVLTQLLTELDGIQLLKRVVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDLASREEILRISLGSVPTSEDVDSRLLADKTAGFSGAEVVALCREASICALEEDRSAERVCQRHLLLALQQIRPQITPSVLAAYDAFR 733 E VEWPLK P+AF RMGI PP+GVLLYGPPGCSKTL A+ALATES MNF+A+KGPEL SKW+GESE+A+QS+F++ARAAAPT+VFFDE+DA+A +RGGG G G+ +RVL+QLLTELDGI+ LK+V+VVAATNRPD+ID AL+RPGR+DR++YV PPDL +R EIL I +P + DV+ + LA TA FSGAE+ +LCREA++ A+EE ++A+ V RH L AL I+PQI ++LA +D FR Sbjct: 308 EAVEWPLKHPEAFIRMGIRPPKGVLLYGPPGCSKTLTAKALATESSMNFIAIKGPELFSKWVGESEKAVQSIFRKARAAAPTVVFFDEIDAIASQRGGGDGGGSQVADRVLSQLLTELDGIEPLKQVLVVAATNRPDLIDSALMRPGRIDRVLYVGPPDLQARHEILSIHCRKIPLASDVNLQELAIATARFSGAELYSLCREAAMAAIEESKTADVVNTRHFLRALTLIQPQIDDAMLAFFDNFR 553
BLAST of mRNA_C-tenellus_contig10351.1.2 vs. uniprot
Match: H3G7P5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7P5_PHYRM) HSP 1 Score: 314 bits (805), Expect = 2.120e-97 Identity = 154/244 (63.11%), Postives = 199/244 (81.56%), Query Frame = 2 Query: 2 EVVEWPLKFPQAFARMGISPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERALQSLFKRARAAAPTIVFFDEVDALACKRGGGTGAGATERVLTQLLTELDGIQLLKRVVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDLASREEILRISLGSVPTSEDVDSRLLADKTAGFSGAEVVALCREASICALEEDRSAERVCQRHLLLALQQIRPQITPSVLAAYDAFR 733 E VEWPL+ P+AF RMGI PP+GVLLYGPPGCSKTL A+ALATESGMNF+A+KGPEL SKW+GESE+ ++ +F++ARAA+PT+VFFDE+DALA RG G +GA++RVL+QLLTELDG++ LKRV+VVAATNRPD++DPAL+RPGR+DR +YV PPD+ +RE+IL+I S P + DV LA +A FSGAE+ ALCREA++ A+EEDR+A V +RH + AL + PQI +LA ++ FR Sbjct: 289 EAVEWPLQHPEAFTRMGIRPPKGVLLYGPPGCSKTLAAKALATESGMNFIAIKGPELFSKWVGESEQQVREIFRKARAASPTVVFFDEIDALASTRGSGGSSGASDRVLSQLLTELDGLEPLKRVLVVAATNRPDLLDPALMRPGRIDRALYVSPPDVPAREQILQIHTRSTPLAPDVSLNELAIASARFSGAELRALCREAALHAVEEDRAATNVAKRHFVRALAVVTPQIDDRMLAFFERFR 532
BLAST of mRNA_C-tenellus_contig10351.1.2 vs. uniprot
Match: A0A7J2KF49_9CREN (AAA family ATPase n=1 Tax=Acidilobales archaeon TaxID=2268176 RepID=A0A7J2KF49_9CREN) HSP 1 Score: 301 bits (772), Expect = 1.150e-95 Identity = 146/244 (59.84%), Postives = 193/244 (79.10%), Query Frame = 2 Query: 2 EVVEWPLKFPQAFARMGISPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERALQSLFKRARAAAPTIVFFDEVDALACKRGGGTG-AGATERVLTQLLTELDGIQLLKRVVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDLASREEILRISLGSVPTSEDVDSRLLADKTAGFSGAEVVALCREASICALEEDRSAERVCQRHLLLALQQIRPQITPSVLAAYDAF 730 E VEWPLK P+AF R+GI PPRG+LL+GPPGC KTL+A+A+ATESG NF++VKGPE+LSKW+GESERA++ +F+RAR AAP I+FFDE+DA+A RG G G + TERV++Q+LTE+DGI+ L+ VVV+AATNRPD+IDPALLRPGRLD+L+YVPPPD+ R EI ++ +P +EDVD LA+ T G++GA++ A+CREA++ AL E+ A V H L AL+ IRP IT ++ Y A+ Sbjct: 32 ETVEWPLKHPEAFRRLGIKPPRGILLFGPPGCGKTLLAKAVATESGANFISVKGPEVLSKWVGESERAIRLIFRRARQAAPCIIFFDEIDAIAPVRGAGIGDSHVTERVVSQILTEMDGIEKLENVVVIAATNRPDIIDPALLRPGRLDKLIYVPPPDIKGRYEIFKVHTRKMPLAEDVDLWRLAELTEGYTGADIEAVCREAALMALRENIEAREVRMEHFLAALKIIRPSITEDMVKMYKAW 275
BLAST of mRNA_C-tenellus_contig10351.1.2 vs. uniprot
Match: A0A1V9ZWH3_9STRA (ATPase AFG2 protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWH3_9STRA) HSP 1 Score: 305 bits (782), Expect = 1.340e-95 Identity = 149/244 (61.07%), Postives = 195/244 (79.92%), Query Frame = 2 Query: 2 EVVEWPLKFPQAFARMGISPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERALQSLFKRARAAAPTIVFFDEVDALACKRGGGTGAGATERVLTQLLTELDGIQLLKRVVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDLASREEILRISLGSVPTSEDVDSRLLADKTAGFSGAEVVALCREASICALEEDRSAERVCQRHLLLALQQIRPQITPSVLAAYDAFR 733 E VEWPL+ P+AF RMGI PP+G+LLYGPPGCSKTL A+ALATE GMNF+A+KGPEL SKW+GESE+A+QS+F +ARAAAP++VFFDE+DA+A R G+ +G +RVL+QLL ELDGI+ LK+V++VAATNRPD+ID AL+RPGR+DR++YV PPD +REEILRI +P +EDV+ + LA+ T FSGAE+ A CREA++CA++ED + + V +RH AL I PQI +L +D +R Sbjct: 158 EAVEWPLQHPEAFVRMGIRPPKGILLYGPPGCSKTLTAKALATEGGMNFIAIKGPELFSKWVGESEKAIQSIFSKARAAAPSVVFFDEIDAVASSRQ-GSSSGVGDRVLSQLLNELDGIEPLKKVIIVAATNRPDLIDSALMRPGRIDRILYVGPPDCTAREEILRIHTRKMPLAEDVNIKELANLTDRFSGAELAAYCREAALCAIQEDYNTKSVARRHFNSALGMITPQIDDQMLDFFDHYR 400
BLAST of mRNA_C-tenellus_contig10351.1.2 vs. uniprot
Match: G4YK00_PHYSP (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YK00_PHYSP) HSP 1 Score: 315 bits (807), Expect = 2.940e-95 Identity = 155/244 (63.52%), Postives = 198/244 (81.15%), Query Frame = 2 Query: 2 EVVEWPLKFPQAFARMGISPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESERALQSLFKRARAAAPTIVFFDEVDALACKRGGGTGAGATERVLTQLLTELDGIQLLKRVVVVAATNRPDVIDPALLRPGRLDRLVYVPPPDLASREEILRISLGSVPTSEDVDSRLLADKTAGFSGAEVVALCREASICALEEDRSAERVCQRHLLLALQQIRPQITPSVLAAYDAFR 733 E VEWPL+ P+AF RMGI PP+GVLLYGPPGCSKTL A+ALATESGMNF+A+KGPEL SKW+GESE+ ++ +F++ARAA+PT+VFFDE+DALA RG G G+GA++RVL+QLLTELDG++ LKRV+VVAATNRPD++DPAL+RPGR+DR +YV PPD+ RE+IL+I P + DV LA TA FSGAE+ ALCREA++ A+EEDR+A V +RH + AL + PQI +LA ++ FR Sbjct: 507 EAVEWPLQHPEAFTRMGIRPPKGVLLYGPPGCSKTLAAKALATESGMNFIAIKGPELFSKWVGESEQQVREVFRKARAASPTVVFFDEIDALASTRGSGGGSGASDRVLSQLLTELDGLEPLKRVLVVAATNRPDLLDPALMRPGRIDRALYVSPPDVPVREQILQIHTRKTPLASDVSLAELAIATARFSGAELQALCREAALHAVEEDRAAVNVAKRHFVRALSIVTPQIDDRMLAFFERFR 750 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10351.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10351.1.2 >prot_C-tenellus_contig10351.1.2 ID=prot_C-tenellus_contig10351.1.2|Name=mRNA_C-tenellus_contig10351.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=243bp MGISPPRGVLLYGPPGCSKTLMARALATESGMNFLAVKGPELLSKWLGESback to top mRNA from alignment at C-tenellus_contig10351:2129..5596- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10351.1.2 ID=mRNA_C-tenellus_contig10351.1.2|Name=mRNA_C-tenellus_contig10351.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3468bp|location=Sequence derived from alignment at C-tenellus_contig10351:2129..5596- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10351:2129..5596- >mRNA_C-tenellus_contig10351.1.2 ID=mRNA_C-tenellus_contig10351.1.2|Name=mRNA_C-tenellus_contig10351.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=729bp|location=Sequence derived from alignment at C-tenellus_contig10351:2129..5596- (Choristocarpus tenellus KU2346)back to top |