mRNA_C-tenellus_contig10337.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10337.1.1
Unique NamemRNA_C-tenellus_contig10337.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10337.1.1 vs. uniprot
Match: UPI001C2544AD (secreted RxLR effector protein 161-like n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2544AD)

HSP 1 Score: 86.3 bits (212), Expect = 3.050e-18
Identity = 43/108 (39.81%), Postives = 67/108 (62.04%), Query Frame = 1
Query:    7 DHEEELDPIIYPYASILGKLMFLAGMTRPDLANSVRELGRRAASPCMRHWHGLQHVLHYVTGTLDVCIHYDRGDKYMDERNKEHLVGYGDSDWGTDQQTRRSVTGYII 330
            +H  E+D I  PYA+I+G +M+    TRPD++  +  + R  A P + HWH L+ +L Y+ GT D  I +D G K ++E   + L+GY DSD+ T+  TR+S +GY+ 
Sbjct:   27 EHRREMDKI--PYANIVGSIMYTMVCTRPDISQGISVVSRYMADPGLEHWHALKWILRYLNGTQDYGILFD-GSKEIEE---QPLMGYCDSDFATNIDTRKSQSGYVF 128          
BLAST of mRNA_C-tenellus_contig10337.1.1 vs. uniprot
Match: A0A383VEJ4_TETOB (Integrase catalytic domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VEJ4_TETOB)

HSP 1 Score: 85.9 bits (211), Expect = 2.930e-17
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 1
Query:    1 RQDHEEELDPIIYPYASILGKLMFLAGMTRPDLANSVRELGRRAASPCMRHWHGLQHVLHYVTGTLDVCIHYDRGDKYMDERNKEHLVGYGDSDWGTDQQTRRSVTGYII 330
            + +  E LD   YPYA+++G L++LA  TRPD+A  V  L R  A+P M HWH  + VL Y+ GT    ++Y +        +   L+GY DSD+  D  TRRS  G+  
Sbjct: 1120 KDEDSEPLDTSKYPYATLVGALLYLANCTRPDIAYPVGVLARFMANPGMSHWHAAKGVLRYLAGTSTYGLNYSKAG------SSSTLIGYTDSDFAGDADTRRSTAGFTF 1223          
BLAST of mRNA_C-tenellus_contig10337.1.1 vs. uniprot
Match: A0A2X0M940_9BASI (BQ5605_C001g00968 protein n=1 Tax=Microbotryum silenes-dioicae TaxID=796604 RepID=A0A2X0M940_9BASI)

HSP 1 Score: 84.7 bits (208), Expect = 7.160e-17
Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = 1
Query:    1 RQDHEEELDPIIYPYASILGKLMFLAGMTRPDLANSVRELGRRAASPCMRHWHGLQHVLHYVTGTLDVCIHYDRGDKYMDERNKEHLVGYGDSDWGTDQQTRRSVTGYII 330
            R   +   DP + PY +I+GKL++L+G TRPD+A +V +  R        HW  L+H+L Y+ GT +  I Y +  + M       L G+ D+D G D  TRRSV+GY+ 
Sbjct:  458 RNRADSSFDPALIPYRAIVGKLLYLSGTTRPDIAFAVSKAARFCNDFTAEHWEALKHILRYLVGTRNFGIRYQKSFQPM----SAILEGFVDADHGADPVTRRSVSGYVF 563          
BLAST of mRNA_C-tenellus_contig10337.1.1 vs. uniprot
Match: A0A2X0M484_9BASI (BQ5605_C001g00760 protein n=2 Tax=Microbotryum silenes-dioicae TaxID=796604 RepID=A0A2X0M484_9BASI)

HSP 1 Score: 82.4 bits (202), Expect = 9.950e-17
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 1
Query:    1 RQDHEEELDPIIYPYASILGKLMFLAGMTRPDLANSVRELGRRAASPCMRHWHGLQHVLHYVTGTLDVCIHYDRGDKYMDERNKEHLVGYGDSDWGTDQQTRRSVTGYII 330
            R   +   DP   PY +I+GKL++L+G TRPD+A +V +  R        HW  L+H+L Y+ GT +  I Y +  + M       L G+ D+D G D  TRRSV+GY+ 
Sbjct:   18 RNRADSGFDPASIPYRAIVGKLLYLSGTTRPDIAFAVSKAARFCNDFTAEHWEALKHILRYLVGTRNFGIRYQKSFQPM----SAILEGFVDADHGADPVTRRSVSGYVF 123          
BLAST of mRNA_C-tenellus_contig10337.1.1 vs. uniprot
Match: A0A2X0MTB1_9BASI (BQ5605_C043g12072 protein n=1 Tax=Microbotryum silenes-dioicae TaxID=796604 RepID=A0A2X0MTB1_9BASI)

HSP 1 Score: 82.8 bits (203), Expect = 3.570e-16
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 1
Query:    1 RQDHEEELDPIIYPYASILGKLMFLAGMTRPDLANSVRELGRRAASPCMRHWHGLQHVLHYVTGTLDVCIHYDRGDKYMDERNKEHLVGYGDSDWGTDQQTRRSVTGYII 330
            R   +   DP   PY +I+GKL++L+G TRPD+A +V +  R        HW  L+H+L Y+ GT +  I Y +  + M       L G+ D+D G D  TRRSV+GY+ 
Sbjct: 1284 RNRTDSGFDPASIPYCAIVGKLLYLSGTTRPDIAFAVSKAARFCNDFTAEHWEALKHILRYLVGTRNFGIRYQKSFQPM----SAILEGFVDADHGADPVTRRSVSGYVF 1389          
BLAST of mRNA_C-tenellus_contig10337.1.1 vs. uniprot
Match: A0A2X0LL29_9BASI (BZ3500_MvSof-1268-A1-R1_Chr6-2g08557 protein n=1 Tax=Microbotryum saponariae TaxID=289078 RepID=A0A2X0LL29_9BASI)

HSP 1 Score: 82.0 bits (201), Expect = 4.070e-16
Identity = 41/104 (39.42%), Postives = 61/104 (58.65%), Query Frame = 1
Query:   19 ELDPIIYPYASILGKLMFLAGMTRPDLANSVRELGRRAASPCMRHWHGLQHVLHYVTGTLDVCIHYDRGDKYMDERNKEHLVGYGDSDWGTDQQTRRSVTGYII 330
            + DP   PY +I+GKL++L+G TRPD+A +V +  R   +    HW  L+H+L Y+ GT +  I Y +  + M       L G+ D+D G D  TRRSV+GY+ 
Sbjct:   90 DFDPASIPYHAIVGKLLYLSGTTRPDIAFAVSKAARFCNNFKAEHWEALKHILRYLVGTRNFGIQYQKTHQPM----SAILEGFVDADHGADPVTRRSVSGYVF 189          
BLAST of mRNA_C-tenellus_contig10337.1.1 vs. uniprot
Match: A0A2X0PJ36_9BASI (BQ5605_C030g10874 protein n=1 Tax=Microbotryum silenes-dioicae TaxID=796604 RepID=A0A2X0PJ36_9BASI)

HSP 1 Score: 82.4 bits (202), Expect = 4.350e-16
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 1
Query:    1 RQDHEEELDPIIYPYASILGKLMFLAGMTRPDLANSVRELGRRAASPCMRHWHGLQHVLHYVTGTLDVCIHYDRGDKYMDERNKEHLVGYGDSDWGTDQQTRRSVTGYII 330
            R   +   DP   PY +I+GKL++L+G TRPD+A +V +  R        HW  L+H+L Y+ GT +  I Y +  + M       L G+ D+D G D  TRRSV+GY+ 
Sbjct:  254 RNRADSGFDPASIPYRAIVGKLLYLSGTTRPDIAFAVSKAARFCNDFTAEHWEALKHILRYLVGTRNFGIRYQKSFQPM----SAILEGFVDADHGADPVTRRSVSGYVF 359          
BLAST of mRNA_C-tenellus_contig10337.1.1 vs. uniprot
Match: A0A2X0LYI0_9BASI (BQ5605_C002g01323 protein n=1 Tax=Microbotryum silenes-dioicae TaxID=796604 RepID=A0A2X0LYI0_9BASI)

HSP 1 Score: 82.4 bits (202), Expect = 4.740e-16
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 1
Query:    1 RQDHEEELDPIIYPYASILGKLMFLAGMTRPDLANSVRELGRRAASPCMRHWHGLQHVLHYVTGTLDVCIHYDRGDKYMDERNKEHLVGYGDSDWGTDQQTRRSVTGYII 330
            R   +   DP   PY +I+GKL++L+G TRPD+A +V +  R        HW  L+H+L Y+ GT +  I Y +  + M       L G+ D+D G D  TRRSV+GY+ 
Sbjct:  738 RNRADSGFDPASIPYRAIVGKLLYLSGTTRPDIAFAVSKAARFCNDFTAEHWEALKHILRYLVGTRNFGIRYQKSFQPM----SAILEGFVDADHGADPVTRRSVSGYVF 843          
BLAST of mRNA_C-tenellus_contig10337.1.1 vs. uniprot
Match: A0A2X0N0G9_9BASI (BQ5605_C006g04190 protein n=1 Tax=Microbotryum silenes-dioicae TaxID=796604 RepID=A0A2X0N0G9_9BASI)

HSP 1 Score: 82.4 bits (202), Expect = 4.750e-16
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 1
Query:    1 RQDHEEELDPIIYPYASILGKLMFLAGMTRPDLANSVRELGRRAASPCMRHWHGLQHVLHYVTGTLDVCIHYDRGDKYMDERNKEHLVGYGDSDWGTDQQTRRSVTGYII 330
            R   +   DP   PY +I+GKL++L+G TRPD+A +V +  R        HW  L+H+L Y+ GT +  I Y +  + M       L G+ D+D G D  TRRSV+GY+ 
Sbjct:  772 RNRADSGFDPASIPYRAIVGKLLYLSGTTRPDIAFAVSKAARFCNDFTAEHWEALKHILRYLVGTRNFGIRYQKSFQPM----SAILEGFVDADHGADPVTRRSVSGYVF 877          
BLAST of mRNA_C-tenellus_contig10337.1.1 vs. uniprot
Match: A0A2X0MLC6_9BASI (BQ5605_C002g01665 protein n=2 Tax=Microbotryum silenes-dioicae TaxID=796604 RepID=A0A2X0MLC6_9BASI)

HSP 1 Score: 82.4 bits (202), Expect = 4.840e-16
Identity = 42/110 (38.18%), Postives = 61/110 (55.45%), Query Frame = 1
Query:    1 RQDHEEELDPIIYPYASILGKLMFLAGMTRPDLANSVRELGRRAASPCMRHWHGLQHVLHYVTGTLDVCIHYDRGDKYMDERNKEHLVGYGDSDWGTDQQTRRSVTGYII 330
            R   +   DP   PY +I+GKL++L+G TRPD+A +V +  R        HW  L+H+L Y+ GT +  I Y +  + M       L G+ D+D G D  TRRSV+GY+ 
Sbjct: 1289 RNRADSGFDPASIPYRAIVGKLLYLSGTTRPDIAFAVSKAARFCNDFTAEHWEALKHILRYLVGTRNFGIRYQKSFQPM----SAILEGFVDADHGADPVTRRSVSGYVF 1394          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10337.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C2544AD3.050e-1839.81secreted RxLR effector protein 161-like n=1 Tax=Sa... [more]
A0A383VEJ4_TETOB2.930e-1739.09Integrase catalytic domain-containing protein n=1 ... [more]
A0A2X0M940_9BASI7.160e-1738.18BQ5605_C001g00968 protein n=1 Tax=Microbotryum sil... [more]
A0A2X0M484_9BASI9.950e-1738.18BQ5605_C001g00760 protein n=2 Tax=Microbotryum sil... [more]
A0A2X0MTB1_9BASI3.570e-1638.18BQ5605_C043g12072 protein n=1 Tax=Microbotryum sil... [more]
A0A2X0LL29_9BASI4.070e-1639.42BZ3500_MvSof-1268-A1-R1_Chr6-2g08557 protein n=1 T... [more]
A0A2X0PJ36_9BASI4.350e-1638.18BQ5605_C030g10874 protein n=1 Tax=Microbotryum sil... [more]
A0A2X0LYI0_9BASI4.740e-1638.18BQ5605_C002g01323 protein n=1 Tax=Microbotryum sil... [more]
A0A2X0N0G9_9BASI4.750e-1638.18BQ5605_C006g04190 protein n=1 Tax=Microbotryum sil... [more]
A0A2X0MLC6_9BASI4.840e-1638.18BQ5605_C002g01665 protein n=2 Tax=Microbotryum sil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10337contigC-tenellus_contig10337:1630..1959 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog13333.ERM98543
Model size330
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.8e-20
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,383NN@33090|Viridiplantae,3GNHS@35493|Streptophyta
Descriptiontransposition, RNA-mediated
Cds size330
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789126.5837772-CDS-C-tenellus_contig10337:1629..19591680789126.5837772-CDS-C-tenellus_contig10337:1629..1959Choristocarpus tenellus KU2346CDSC-tenellus_contig10337 1630..1959 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10337.1.1prot_C-tenellus_contig10337.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10337 1630..1959 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10337.1.1

>prot_C-tenellus_contig10337.1.1 ID=prot_C-tenellus_contig10337.1.1|Name=mRNA_C-tenellus_contig10337.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=110bp
RQDHEEELDPIIYPYASILGKLMFLAGMTRPDLANSVRELGRRAASPCMR
HWHGLQHVLHYVTGTLDVCIHYDRGDKYMDERNKEHLVGYGDSDWGTDQQ
TRRSVTGYII
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mRNA from alignment at C-tenellus_contig10337:1630..1959+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10337.1.1 ID=mRNA_C-tenellus_contig10337.1.1|Name=mRNA_C-tenellus_contig10337.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=330bp|location=Sequence derived from alignment at C-tenellus_contig10337:1630..1959+ (Choristocarpus tenellus KU2346)
AGACAAGATCATGAGGAGGAACTAGATCCCATCATTTACCCCTATGCCAG TATTCTTGGGAAACTCATGTTCTTAGCAGGCATGACTAGACCAGACCTGG CTAATAGCGTTCGTGAACTGGGGCGTAGAGCAGCATCTCCATGTATGCGA CACTGGCACGGACTGCAACACGTTCTGCATTACGTAACAGGGACATTGGA TGTCTGTATTCACTATGATCGAGGGGACAAATATATGGACGAGAGGAATA AAGAACACCTGGTTGGGTACGGAGATTCTGACTGGGGCACCGACCAACAA ACACGCAGGAGTGTTACAGGGTACATAATA
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Coding sequence (CDS) from alignment at C-tenellus_contig10337:1630..1959+

>mRNA_C-tenellus_contig10337.1.1 ID=mRNA_C-tenellus_contig10337.1.1|Name=mRNA_C-tenellus_contig10337.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=330bp|location=Sequence derived from alignment at C-tenellus_contig10337:1630..1959+ (Choristocarpus tenellus KU2346)
AGACAAGATCATGAGGAGGAACTAGATCCCATCATTTACCCCTATGCCAG
TATTCTTGGGAAACTCATGTTCTTAGCAGGCATGACTAGACCAGACCTGG
CTAATAGCGTTCGTGAACTGGGGCGTAGAGCAGCATCTCCATGTATGCGA
CACTGGCACGGACTGCAACACGTTCTGCATTACGTAACAGGGACATTGGA
TGTCTGTATTCACTATGATCGAGGGGACAAATATATGGACGAGAGGAATA
AAGAACACCTGGTTGGGTACGGAGATTCTGACTGGGGCACCGACCAACAA
ACACGCAGGAGTGTTACAGGGTACATAATA
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