mRNA_C-tenellus_contig10334.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig10334.2.1
Unique NamemRNA_C-tenellus_contig10334.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A811UVA7_CERCA ((Mediterranean fruit fly) hypothetical protein n=1 Tax=Ceratitis capitata TaxID=7213 RepID=A0A811UVA7_CERCA)

HSP 1 Score: 196 bits (499), Expect = 8.460e-53
Identity = 114/331 (34.44%), Postives = 182/331 (54.98%), Query Frame = 1
Query:   19 DACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLDQHFYAESIVRE-GMGSAEVRNTSSSLNPGMDLTARRTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILKGVTAW-YGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRKKQVE 1005
            ++CL+    +   V +L  YVDD+ +  +  + I ++K  LL  +E +D+G  +  +G+ I + +  I+L Q  Y ++++++ GM       T S LN          D+ +      PYR ++G LM+ +   RPDI+N+V  L ++ A+P   HW   +  L YLAGT   G+ Y       +  L+GY D+DWG  T  RR  TGY+ L++GA I+WKS+ Q  V  SS+E E  ++    + A++L  +L E+G+ K   A  Y DNRGA   A    F+ RT+H+DIK  F RE +S G+F +K++ T   +AD++TK L +   E
Sbjct:  598 ESCLFHGYFEKNLVLLLV-YVDDLLIASSEVKIIHKLKQKLLKYFEIKDIGRANYCLGLEIHQKDGTISLKQSGYIQALLKKFGMSQCNPVATPSELNMNF-------DKNDTINEACPYRELIGALMYMSVSARPDIANTVSRLAQFVANPTKCHWNAAKRVLRYLAGTANKGLLY----RKTDLPLIGYADADWGGCTTDRRSYTGYVFLLSGAVISWKSQKQRTVALSSTEAEYVSLAESAKEAVYLRSLLNEIGLQKLADATIYVDNRGAQCLANDPVFHARTKHIDIKHHFVRECISAGLFSLKHVSTQEMIADVMTKPLARANHE 916          
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: W8B6G9_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Ceratitis capitata TaxID=7213 RepID=W8B6G9_CERCA)

HSP 1 Score: 196 bits (499), Expect = 1.590e-52
Identity = 114/331 (34.44%), Postives = 182/331 (54.98%), Query Frame = 1
Query:   19 DACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLDQHFYAESIVRE-GMGSAEVRNTSSSLNPGMDLTARRTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILKGVTAW-YGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRKKQVE 1005
            ++CL+    +   V +L  YVDD+ +  +  + I ++K  LL  +E +D+G  +  +G+ I + +  I+L Q  Y ++++++ GM       T S LN          D+ +      PYR ++G LM+ +   RPDI+N+V  L ++ A+P   HW   +  L YLAGT   G+ Y       +  L+GY D+DWG  T  RR  TGY+ L++GA I+WKS+ Q  V  SS+E E  ++    + A++L  +L E+G+ K   A  Y DNRGA   A    F+ RT+H+DIK  F RE +S G+F +K++ T   +AD++TK L +   E
Sbjct: 1047 ESCLFHGYFEKNLVLLLV-YVDDLLIASSEVKIIHKLKQKLLKYFEIKDIGRANYCLGLEIHQKDGTISLKQSGYIQALLKKFGMSQCNPVATPSELNMNF-------DKNDTINEACPYRELIGALMYMSVSARPDIANTVSRLAQFVANPTKCHWNAAKRVLRYLAGTANKGLLY----RKTDLPLIGYADADWGGCTTDRRSYTGYVFLLSGAVISWKSQKQRTVALSSTEAEYVSLAESAKEAVYLRSLLNEIGLQKLADATIYVDNRGAQCLANDPVFHARTKHIDIKHHFVRECISAGLFSLKHVSTQEMIADVMTKPLARANHE 1365          
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: UPI001131AAB8 (Ty1/Copia family RNAse HI domain-containing protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001131AAB8)

HSP 1 Score: 185 bits (469), Expect = 2.450e-52
Identity = 102/317 (32.18%), Postives = 171/317 (53.94%), Query Frame = 1
Query:   16 FDACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAG--ITLDQHFYAESIVREGMGSAEVRNTSSSLNPGMDLTARRTDEEELDQRHK---PYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILKGVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPT 951
            ++ C+Y+ +  DG    L  YVDD+ +     EEI ++K  L  ++E +DLG   K++G+ I RD     + L Q  Y + +++      + +  S+ L     L+   +  +E ++ +    PY  ++G LM+    TRPDIS +V  + RY  +P   HW+ ++  L Y+  T  VG+ +    + DN  +VGY DSD+  D   RR  TGY+     AP++WKS +Q  V  S++E E  A+   ++ AI+L G+L ELG+ +     + D++ AIQ A  + ++ RT+H+D++  F RE + +G   VK I T
Sbjct:    8 YNHCVYLCKLNDGSFVYLLLYVDDMLIASKNSEEIDKLKIQLKKEFEMKDLGEAKKILGMEIIRDRRSKKLCLSQKEYLKRVLQRFGIDDKTKPVSTPLASHFKLSTTMSPMDEAEREYMSKVPYANVVGSLMYAMVCTRPDISQAVGVISRYMHNPGKEHWQAVKWILRYIHNTVDVGLVFE---QEDNQSVVGYCDSDFAGDLDKRRSTTGYVFTFAKAPVSWKSTLQSTVALSTTEAEYMAITEAVKEAIWLQGLLKELGVEQKSITIFCDSQSAIQLAKNQVYHARTKHIDVRYHFVREIIEEGGITVKKIHT 321          
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A6A3XJV1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XJV1_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.060e-51
Identity = 115/335 (34.33%), Postives = 177/335 (52.84%), Query Frame = 1
Query:   19 DACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLD--QHFYAESIVREGMGSAEVRNTSSSLNPGMDLTARR---TDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGIL-KGVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRKKQVE 1005
            D C+YVKRSK+G + V   YVDD+ +     E+I  +K+ L   ++ ++LG    ++G+ I  D    TL      Y + +V E  G    +   +    G+ L+  +   TD E+   R KPYR+++G L++    TRPDI+  V +L R+  +P  +HW      L YL  T + GI Y  G       L  Y D+DWG     RR  +G +++   AP+ +KSK Q  V  SS+E E  A+   ++  ++   +L  +G L +  T  + DN+GAI      G++ RT+HVDI+  FT E V +G  +V+Y+ T  QLADILTK L  K ++
Sbjct:   50 DQCVYVKRSKNGFIYVCL-YVDDMIIAAKTSEDIRDVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKPTRYIDDVV-EHFGQENAKPVDNPCAAGLKLSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPEKQHWNAAVRVLRYLKSTLQHGIIYHGGTHTVT--LKAYSDADWGTSLDDRRSGSGVMVMTGNAPVVFKSKFQRTVALSSAEAEYMALSLCVQEVLWTRAMLTVMGTLQRNATTIWEDNQGAIALVHNAGYHARTKHVDIRHHFTTENVERGTVKVEYVDTKNQLADILTKALGTKTLK 380          
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.820e-51
Identity = 116/341 (34.02%), Postives = 179/341 (52.49%), Query Frame = 1
Query:   13 DFDACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITL--DQHFYAESIVREGMGSAEVRNTSSSLNPGMDLTAR---RTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVG-----YGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILK-GVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRKKQV 1002
            D D C+Y +   +G   V   YVDD+ +       I  +K  +  K+  +DLG    +VG+ I  D    TL   Q  Y ESI+++  G    +   + L PG+ LT     +T+E++   + KPYR+++G LM+ A  TRPDIS +V +L R+  +P ++HW      + YL  T  VGI Y         GL+G     Y D+DW  +   RR V+G L+++ GAP+ W+S  Q  V  SS+E E  A+   ++  +++  +L E+G  + G T  Y DN+GA+  A   G+  RT+H+DI+  F RE V      ++Y+ T  QLA  +TK L  K +
Sbjct:  249 DADPCVYTRGEGEGECIVCL-YVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKK-FGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYD--------GLLGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLAYFMTKGLSSKML 579          
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: W8AYT4_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8AYT4_CERCA)

HSP 1 Score: 192 bits (489), Expect = 3.430e-51
Identity = 115/327 (35.17%), Postives = 178/327 (54.43%), Query Frame = 1
Query:   19 DACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLDQHFYAESIVRE-GMGSAEVRNTSSSLNPGMDLTARRTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGI-LKGVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRK 993
            + CL+  +    +  +L  YVDD+ +  +  + I  +K  LL ++E +DLG     +G+ I + E GI L Q  Y   ++++ GM       T S + P +     +  EE       PYR ++G LM+ +  TRPDI+N+V  L ++  +P   HW   +  L YLAGTT  G+ +   G+     LVGY D+DWG     RR  TGY+ L++GA I WKS+ Q  V  SS+E E  ++    + AI+L  +L ELG+ +      + DN+GA   A    F+ RT+H+DIK  F RE V+ G F+++++PT   +AD++TK L K
Sbjct: 1050 EPCLFYGKVNK-QFCLLLVYVDDLLIASSNLKNIEYIKQQLLQEFEIKDLGEAKYCLGLEIEQSENGIHLKQSGYVMDLLKQYGMEKCNPIMTPSEVKPQLPEAKDKPCEEY------PYRELIGSLMYLSVATRPDIANTVSRLAQFVTNPSMCHWLAAKRVLRYLAGTTHRGLMFRKTGDP----LVGYTDADWGGCAIDRRSYTGYIFLLSGAAITWKSQKQRTVALSSTEAEYVSLAEAAKEAIYLRSLLCELGLQMFNDIKIFVDNKGAEYLANDPVFHARTKHIDIKHHFVRESVTAGHFQLQHVPTQEMIADVMTKSLPK 1365          
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A6G0MK94_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MK94_9STRA)

HSP 1 Score: 184 bits (468), Expect = 3.760e-51
Identity = 113/339 (33.33%), Postives = 178/339 (52.51%), Query Frame = 1
Query:   13 DFDACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITL--DQHFYAESIVREGMGSAEVRNTSSSLNPGMDLTAR---RTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVG-----YGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILK-GVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRKK 996
            D D C+Y +   +G   V   YVDD+ +       I  +K  +  K+  +DLG    ++G+ I  D    TL   Q  Y ESI+++  G    +   + L PG+ LT     +T+E++   + KPYR+++G LM+ A  TRPDIS +V +L R+  +P ++HW      + YL  T  VGI Y         GL+G     Y D++W  +   RR V+G L+++ GAP+ W+S  Q  V  SS+E E  A+   ++  +++  +L ++G  + G    Y DN+GA+  A   G+  RT+H+DI+  F RE V      ++Y+ T  QLAD +TK L  K
Sbjct:   88 DADPCVYTRGEGEGECIVCL-YVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKK-FGQENAKPWLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYD--------GLLGTQLEAYSDANWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGAMVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLADFMTKGLSSK 416          
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A6A3A9V0_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3A9V0_HIBSY)

HSP 1 Score: 192 bits (488), Expect = 4.760e-51
Identity = 111/335 (33.13%), Postives = 188/335 (56.12%), Query Frame = 1
Query:   16 FDACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEA--GITLDQHFYAESIV-REGMGSAEVRNT--------SSSLNPGMDLTARRTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILKGVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRL 987
            +D+C+Y+K+  D     L  YVDD+ +     EE+ ++K  L ++++ +DLG   K++G+ ITRD     + L Q  Y + ++ R  M  A+   T        S+S  PG       ++EE+    + PY + +G +M+    +RPD++ +V  + R+ A+P   HW+ L+  L YL GTT++G+ +    E +   +VGY DSD+     +R+ +TG++  + G  ++WKS +Q  V  S++E E  A+   I+ A++L G++ ELGI + V   + DN+  I     + F+ R++H+D+KL F R+ V+KG   VK IPT    AD+LTK L
Sbjct: 1057 YDSCVYMKKQDDEISVFLLLYVDDMLVASRSKEEVQKIKGMLNSEFDMKDLGPATKILGMEITRDRKKNNLFLSQKSYIQKVLMRFNMHEAKQVTTPIGQHFRLSNSQAPG-------SEEEKTYMENIPYTSGVGSIMYGMVCSRPDLAYAVSIISRFMANPGKAHWEALKWTLRYLRGTTELGLMFKKQ-ENEREKVVGYVDSDYAGSIDTRKSLTGFIFTVFGTAVSWKSNLQSVVALSTTEAEYIAVTEAIKEAMWLQGMVEELGIQQKVLTVFCDNQSTIHLTRNQVFHERSKHIDVKLHFVRDVVTKGSITVKKIPTEENPADMLTKAL 1383          
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A6A4CLK4_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=10 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CLK4_9STRA)

HSP 1 Score: 186 bits (472), Expect = 5.190e-51
Identity = 116/335 (34.63%), Postives = 177/335 (52.84%), Query Frame = 1
Query:   19 DACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLD--QHFYAESIVREGMGSAEVRNTSSSLNPGMDLTARR---TDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGIL-KGVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRKKQVE 1005
            D C+YVKRSK+G + V   YVDD+ +     EEI  +K+ L   ++ ++LG    ++G+ I  D    TL      Y + +V E  G    +   +    G+ L+  +   TD E+   R KPYR+++G L++    TRPDI+  V +L R+  +P  +HW      L YL  T + GI Y  G       L  Y D+DWG     RR  +G +++   AP+ +KSK Q  V  SS+E E  A+   ++  ++   +L  +G L +  T  + DN+GAI      G++ RT+HVDI+  FT E V +G  +V+Y+ T  QLADILTK L  K ++
Sbjct:  171 DQCVYVKRSKNGFIYVCL-YVDDMIIAAKTSEEIRDVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKPTRYIDDVV-EHFGQENAKPVDNPCAAGLKLSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPEKQHWNAAVRVLRYLKSTLQHGIIYHGGTHTVT--LKAYSDADWGTSLDDRRSGSGVMVMTGNAPVVFKSKFQRTVALSSAEAEYMALSLCVQEVLWTRAMLTVMGTLQRNATTIWEDNQGAIALVHNAGYHARTKHVDIRHHFTTENVERGTVKVEYVDTKNQLADILTKALGTKTLK 501          
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A8J6D8H8_9ROSI (Integrase catalytic domain-containing protein n=5 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D8H8_9ROSI)

HSP 1 Score: 192 bits (487), Expect = 6.250e-51
Identity = 109/327 (33.33%), Postives = 181/327 (55.35%), Query Frame = 1
Query:   16 FDACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDE--AGITLDQHFYAESIVREGMGSAEVRNTSSSLNPGMDLTAR---RTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILKGVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTK 981
            +D C+Y+++  D     L  YVDD+ +     +EI ++K  L  ++E +DLG   K++G+ I+RD+    + L+Q  Y + +++    +   ++ S+ L   + L A+   +T+EE       PY   +G LM+    TRPDIS +V  + RY   P   HW+ ++  L YL  T  VG+ +     +    +VGY DSD+  D   RR  TGYL  +  AP++WKS +Q  V  S++E E  A+   ++ AI+L G+L +LGI++   + Y D++ AI  A  + ++ RT+H+D++  F RE   KG   ++ IPTA   AD++TK
Sbjct:  958 YDNCVYLQKLHDRSFIYLLLYVDDMLIASKSQKEIDKLKAQLNEEFEMKDLGEAKKILGMEISRDKQRGKLCLNQKQYLKKVLQCFGVNENTKHVSTPLASHLKLNAQLSPKTEEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVGVVSRYMHDPGKGHWQAVKWILRYLRKTVDVGLVFEQDEALGQF-VVGYVDSDFAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVAISTTEAEYMAVTEAVKEAIWLNGLLEDLGIVQSHISLYCDSQSAIHLAKNQVYHSRTKHIDVRYHFVREVFEKGKILLQKIPTADNPADMMTK 1283          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A811UVA7_CERCA8.460e-5334.44(Mediterranean fruit fly) hypothetical protein n=1... [more]
W8B6G9_CERCA1.590e-5234.44Retrovirus-related Pol polyprotein from transposon... [more]
UPI001131AAB82.450e-5232.18Ty1/Copia family RNAse HI domain-containing protei... [more]
A0A6A3XJV1_9STRA1.060e-5134.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3Q908_9STRA2.820e-5134.02Retrovirus-related Pol polyprotein from transposon... [more]
W8AYT4_CERCA3.430e-5135.17Retrovirus-related Pol polyprotein from transposon... [more]
A0A6G0MK94_9STRA3.760e-5133.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3A9V0_HIBSY4.760e-5133.13Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A6A4CLK4_9STRA5.190e-5134.63Retrovirus-related Pol polyprotein from transposon... [more]
A0A8J6D8H8_9ROSI6.250e-5133.33Integrase catalytic domain-containing protein n=5 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10334contigC-tenellus_contig10334:4327..5340 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7070.TC004282-PA
PFAMsRVT_2,Retrotran_gag_2,rve
Model size1014
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.6e-13
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta,3BI7U@33208|Metazoa,3CTS1@33213|Bilateria,41WYJ@6656|Arthropoda,3SQRW@50557|Insecta
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size384
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789126.525655-UTR-C-tenellus_contig10334:4326..48301680789126.525655-UTR-C-tenellus_contig10334:4326..4830Choristocarpus tenellus KU2346UTRC-tenellus_contig10334 4327..4830 -
1680789126.5513492-UTR-C-tenellus_contig10334:5214..53401680789126.5513492-UTR-C-tenellus_contig10334:5214..5340Choristocarpus tenellus KU2346UTRC-tenellus_contig10334 5215..5340 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789126.5412076-CDS-C-tenellus_contig10334:4830..52141680789126.5412076-CDS-C-tenellus_contig10334:4830..5214Choristocarpus tenellus KU2346CDSC-tenellus_contig10334 4831..5214 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10334.2.1prot_C-tenellus_contig10334.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig10334 4831..5214 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig10334.2.1

>prot_C-tenellus_contig10334.2.1 ID=prot_C-tenellus_contig10334.2.1|Name=mRNA_C-tenellus_contig10334.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=128bp
MKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLDQHFYAESIVREGMGS
AEVRNTSSSLNPGMDLTARRTDEEELDQRHKPYRTILGKLMFQAGMTRPD
ISNSVRELGRYGASPCDRHWKGLQHAL*
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mRNA from alignment at C-tenellus_contig10334:4327..5340-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig10334.2.1 ID=mRNA_C-tenellus_contig10334.2.1|Name=mRNA_C-tenellus_contig10334.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1014bp|location=Sequence derived from alignment at C-tenellus_contig10334:4327..5340- (Choristocarpus tenellus KU2346)
TGGAGTGTTGGCGACTTTGATGCCTGCTTGTATGTCAAAAGGAGTAAAGA TGGAAGGGTTGCTGTTCTTTTTCACTACGTGGATGACATCACATTGACTG GAAACTACCACGAAGAAATAACAAGGATGAAGAACAATCTGCTTACCAAG TACGAAGGACGGGACCTCGGGACCCCAGACAAGTTAGTTGGGGTGGCAAT CACCAGGGATGAGGCTGGCATCACACTAGACCAGCATTTCTATGCAGAGA GCATTGTTCGAGAAGGAATGGGATCTGCAGAAGTACGGAATACCTCATCA TCTCTAAACCCAGGAATGGACCTGACAGCAAGAAGAACTGACGAGGAGGA GCTGGACCAGAGGCACAAACCCTACCGCACCATCCTGGGAAAACTTATGT TCCAAGCCGGGATGACACGACCAGACATATCCAACAGTGTGCGGGAACTG GGAAGATATGGAGCATCTCCATGTGACCGACACTGGAAAGGGCTGCAACA TGCTCTATGATACCTGGCGGGCACCACAAAAGTAGGGATACACTATCCTG CTGGTGGTGAAATGGACAATGGGGGCCTGGTCGGGTATGGAGACTCAGAC TGGGGCAATGATACTGCATCAAGGCGGATCGTGACAGGGTATCTAATACT CATGAATGGAGCACCAATTGCATGGAAATCCAAGATGCAGGGAGCTGTAA CCACATCTTCATCAGAGGTGGAATGAACAGCGATGGTGCATGGAATAAGG CATGCAATATTTCTCATAGGCATTCTGGGGGAACTGGGTATACTCAAAGG GGTCACGGCTTGGTATGGAGACAATCGAGGAGCGATACAAGCAGCGATAA CCGAAGGTTTCAATGGACGGACAAGACATGTCGACATCAAGCTGAAATTC ACCAGGGAGTATGTTAGCAAAGGAGTTTTTAGAGTAAAATATATTCCCAC GGCACTCCAACTTGCAGACATCTTGACCAAAAGACTACGCAAGAAGCAGG TAGAAGACTTTGTA
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Coding sequence (CDS) from alignment at C-tenellus_contig10334:4327..5340-

>mRNA_C-tenellus_contig10334.2.1 ID=mRNA_C-tenellus_contig10334.2.1|Name=mRNA_C-tenellus_contig10334.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=384bp|location=Sequence derived from alignment at C-tenellus_contig10334:4327..5340- (Choristocarpus tenellus KU2346)
ATGAAGAACAATCTGCTTACCAAGTACGAAGGACGGGACCTCGGGACCCC
AGACAAGTTAGTTGGGGTGGCAATCACCAGGGATGAGGCTGGCATCACAC
TAGACCAGCATTTCTATGCAGAGAGCATTGTTCGAGAAGGAATGGGATCT
GCAGAAGTACGGAATACCTCATCATCTCTAAACCCAGGAATGGACCTGAC
AGCAAGAAGAACTGACGAGGAGGAGCTGGACCAGAGGCACAAACCCTACC
GCACCATCCTGGGAAAACTTATGTTCCAAGCCGGGATGACACGACCAGAC
ATATCCAACAGTGTGCGGGAACTGGGAAGATATGGAGCATCTCCATGTGA
CCGACACTGGAAAGGGCTGCAACATGCTCTATGA
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