mRNA_C-tenellus_contig10334.2.1 (mRNA) Choristocarpus tenellus KU2346
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A811UVA7_CERCA ((Mediterranean fruit fly) hypothetical protein n=1 Tax=Ceratitis capitata TaxID=7213 RepID=A0A811UVA7_CERCA) HSP 1 Score: 196 bits (499), Expect = 8.460e-53 Identity = 114/331 (34.44%), Postives = 182/331 (54.98%), Query Frame = 1 Query: 19 DACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLDQHFYAESIVRE-GMGSAEVRNTSSSLNPGMDLTARRTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILKGVTAW-YGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRKKQVE 1005 ++CL+ + V +L YVDD+ + + + I ++K LL +E +D+G + +G+ I + + I+L Q Y ++++++ GM T S LN D+ + PYR ++G LM+ + RPDI+N+V L ++ A+P HW + L YLAGT G+ Y + L+GY D+DWG T RR TGY+ L++GA I+WKS+ Q V SS+E E ++ + A++L +L E+G+ K A Y DNRGA A F+ RT+H+DIK F RE +S G+F +K++ T +AD++TK L + E Sbjct: 598 ESCLFHGYFEKNLVLLLV-YVDDLLIASSEVKIIHKLKQKLLKYFEIKDIGRANYCLGLEIHQKDGTISLKQSGYIQALLKKFGMSQCNPVATPSELNMNF-------DKNDTINEACPYRELIGALMYMSVSARPDIANTVSRLAQFVANPTKCHWNAAKRVLRYLAGTANKGLLY----RKTDLPLIGYADADWGGCTTDRRSYTGYVFLLSGAVISWKSQKQRTVALSSTEAEYVSLAESAKEAVYLRSLLNEIGLQKLADATIYVDNRGAQCLANDPVFHARTKHIDIKHHFVRECISAGLFSLKHVSTQEMIADVMTKPLARANHE 916
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: W8B6G9_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Ceratitis capitata TaxID=7213 RepID=W8B6G9_CERCA) HSP 1 Score: 196 bits (499), Expect = 1.590e-52 Identity = 114/331 (34.44%), Postives = 182/331 (54.98%), Query Frame = 1 Query: 19 DACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLDQHFYAESIVRE-GMGSAEVRNTSSSLNPGMDLTARRTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILKGVTAW-YGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRKKQVE 1005 ++CL+ + V +L YVDD+ + + + I ++K LL +E +D+G + +G+ I + + I+L Q Y ++++++ GM T S LN D+ + PYR ++G LM+ + RPDI+N+V L ++ A+P HW + L YLAGT G+ Y + L+GY D+DWG T RR TGY+ L++GA I+WKS+ Q V SS+E E ++ + A++L +L E+G+ K A Y DNRGA A F+ RT+H+DIK F RE +S G+F +K++ T +AD++TK L + E Sbjct: 1047 ESCLFHGYFEKNLVLLLV-YVDDLLIASSEVKIIHKLKQKLLKYFEIKDIGRANYCLGLEIHQKDGTISLKQSGYIQALLKKFGMSQCNPVATPSELNMNF-------DKNDTINEACPYRELIGALMYMSVSARPDIANTVSRLAQFVANPTKCHWNAAKRVLRYLAGTANKGLLY----RKTDLPLIGYADADWGGCTTDRRSYTGYVFLLSGAVISWKSQKQRTVALSSTEAEYVSLAESAKEAVYLRSLLNEIGLQKLADATIYVDNRGAQCLANDPVFHARTKHIDIKHHFVRECISAGLFSLKHVSTQEMIADVMTKPLARANHE 1365
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: UPI001131AAB8 (Ty1/Copia family RNAse HI domain-containing protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001131AAB8) HSP 1 Score: 185 bits (469), Expect = 2.450e-52 Identity = 102/317 (32.18%), Postives = 171/317 (53.94%), Query Frame = 1 Query: 16 FDACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAG--ITLDQHFYAESIVREGMGSAEVRNTSSSLNPGMDLTARRTDEEELDQRHK---PYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILKGVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPT 951 ++ C+Y+ + DG L YVDD+ + EEI ++K L ++E +DLG K++G+ I RD + L Q Y + +++ + + S+ L L+ + +E ++ + PY ++G LM+ TRPDIS +V + RY +P HW+ ++ L Y+ T VG+ + + DN +VGY DSD+ D RR TGY+ AP++WKS +Q V S++E E A+ ++ AI+L G+L ELG+ + + D++ AIQ A + ++ RT+H+D++ F RE + +G VK I T Sbjct: 8 YNHCVYLCKLNDGSFVYLLLYVDDMLIASKNSEEIDKLKIQLKKEFEMKDLGEAKKILGMEIIRDRRSKKLCLSQKEYLKRVLQRFGIDDKTKPVSTPLASHFKLSTTMSPMDEAEREYMSKVPYANVVGSLMYAMVCTRPDISQAVGVISRYMHNPGKEHWQAVKWILRYIHNTVDVGLVFE---QEDNQSVVGYCDSDFAGDLDKRRSTTGYVFTFAKAPVSWKSTLQSTVALSTTEAEYMAITEAVKEAIWLQGLLKELGVEQKSITIFCDSQSAIQLAKNQVYHARTKHIDVRYHFVREIIEEGGITVKKIHT 321
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A6A3XJV1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XJV1_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.060e-51 Identity = 115/335 (34.33%), Postives = 177/335 (52.84%), Query Frame = 1 Query: 19 DACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLD--QHFYAESIVREGMGSAEVRNTSSSLNPGMDLTARR---TDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGIL-KGVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRKKQVE 1005 D C+YVKRSK+G + V YVDD+ + E+I +K+ L ++ ++LG ++G+ I D TL Y + +V E G + + G+ L+ + TD E+ R KPYR+++G L++ TRPDI+ V +L R+ +P +HW L YL T + GI Y G L Y D+DWG RR +G +++ AP+ +KSK Q V SS+E E A+ ++ ++ +L +G L + T + DN+GAI G++ RT+HVDI+ FT E V +G +V+Y+ T QLADILTK L K ++ Sbjct: 50 DQCVYVKRSKNGFIYVCL-YVDDMIIAAKTSEDIRDVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKPTRYIDDVV-EHFGQENAKPVDNPCAAGLKLSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPEKQHWNAAVRVLRYLKSTLQHGIIYHGGTHTVT--LKAYSDADWGTSLDDRRSGSGVMVMTGNAPVVFKSKFQRTVALSSAEAEYMALSLCVQEVLWTRAMLTVMGTLQRNATTIWEDNQGAIALVHNAGYHARTKHVDIRHHFTTENVERGTVKVEYVDTKNQLADILTKALGTKTLK 380
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.820e-51 Identity = 116/341 (34.02%), Postives = 179/341 (52.49%), Query Frame = 1 Query: 13 DFDACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITL--DQHFYAESIVREGMGSAEVRNTSSSLNPGMDLTAR---RTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVG-----YGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILK-GVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRKKQV 1002 D D C+Y + +G V YVDD+ + I +K + K+ +DLG +VG+ I D TL Q Y ESI+++ G + + L PG+ LT +T+E++ + KPYR+++G LM+ A TRPDIS +V +L R+ +P ++HW + YL T VGI Y GL+G Y D+DW + RR V+G L+++ GAP+ W+S Q V SS+E E A+ ++ +++ +L E+G + G T Y DN+GA+ A G+ RT+H+DI+ F RE V ++Y+ T QLA +TK L K + Sbjct: 249 DADPCVYTRGEGEGECIVCL-YVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKK-FGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYD--------GLLGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLAYFMTKGLSSKML 579
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: W8AYT4_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8AYT4_CERCA) HSP 1 Score: 192 bits (489), Expect = 3.430e-51 Identity = 115/327 (35.17%), Postives = 178/327 (54.43%), Query Frame = 1 Query: 19 DACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLDQHFYAESIVRE-GMGSAEVRNTSSSLNPGMDLTARRTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGI-LKGVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRK 993 + CL+ + + +L YVDD+ + + + I +K LL ++E +DLG +G+ I + E GI L Q Y ++++ GM T S + P + + EE PYR ++G LM+ + TRPDI+N+V L ++ +P HW + L YLAGTT G+ + G+ LVGY D+DWG RR TGY+ L++GA I WKS+ Q V SS+E E ++ + AI+L +L ELG+ + + DN+GA A F+ RT+H+DIK F RE V+ G F+++++PT +AD++TK L K Sbjct: 1050 EPCLFYGKVNK-QFCLLLVYVDDLLIASSNLKNIEYIKQQLLQEFEIKDLGEAKYCLGLEIEQSENGIHLKQSGYVMDLLKQYGMEKCNPIMTPSEVKPQLPEAKDKPCEEY------PYRELIGSLMYLSVATRPDIANTVSRLAQFVTNPSMCHWLAAKRVLRYLAGTTHRGLMFRKTGDP----LVGYTDADWGGCAIDRRSYTGYIFLLSGAAITWKSQKQRTVALSSTEAEYVSLAEAAKEAIYLRSLLCELGLQMFNDIKIFVDNKGAEYLANDPVFHARTKHIDIKHHFVRESVTAGHFQLQHVPTQEMIADVMTKSLPK 1365
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A6G0MK94_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MK94_9STRA) HSP 1 Score: 184 bits (468), Expect = 3.760e-51 Identity = 113/339 (33.33%), Postives = 178/339 (52.51%), Query Frame = 1 Query: 13 DFDACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITL--DQHFYAESIVREGMGSAEVRNTSSSLNPGMDLTAR---RTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVG-----YGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILK-GVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRKK 996 D D C+Y + +G V YVDD+ + I +K + K+ +DLG ++G+ I D TL Q Y ESI+++ G + + L PG+ LT +T+E++ + KPYR+++G LM+ A TRPDIS +V +L R+ +P ++HW + YL T VGI Y GL+G Y D++W + RR V+G L+++ GAP+ W+S Q V SS+E E A+ ++ +++ +L ++G + G Y DN+GA+ A G+ RT+H+DI+ F RE V ++Y+ T QLAD +TK L K Sbjct: 88 DADPCVYTRGEGEGECIVCL-YVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKK-FGQENAKPWLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYD--------GLLGTQLEAYSDANWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAEQVGAMVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLADFMTKGLSSK 416
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A6A3A9V0_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3A9V0_HIBSY) HSP 1 Score: 192 bits (488), Expect = 4.760e-51 Identity = 111/335 (33.13%), Postives = 188/335 (56.12%), Query Frame = 1 Query: 16 FDACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEA--GITLDQHFYAESIV-REGMGSAEVRNT--------SSSLNPGMDLTARRTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILKGVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRL 987 +D+C+Y+K+ D L YVDD+ + EE+ ++K L ++++ +DLG K++G+ ITRD + L Q Y + ++ R M A+ T S+S PG ++EE+ + PY + +G +M+ +RPD++ +V + R+ A+P HW+ L+ L YL GTT++G+ + E + +VGY DSD+ +R+ +TG++ + G ++WKS +Q V S++E E A+ I+ A++L G++ ELGI + V + DN+ I + F+ R++H+D+KL F R+ V+KG VK IPT AD+LTK L Sbjct: 1057 YDSCVYMKKQDDEISVFLLLYVDDMLVASRSKEEVQKIKGMLNSEFDMKDLGPATKILGMEITRDRKKNNLFLSQKSYIQKVLMRFNMHEAKQVTTPIGQHFRLSNSQAPG-------SEEEKTYMENIPYTSGVGSIMYGMVCSRPDLAYAVSIISRFMANPGKAHWEALKWTLRYLRGTTELGLMFKKQ-ENEREKVVGYVDSDYAGSIDTRKSLTGFIFTVFGTAVSWKSNLQSVVALSTTEAEYIAVTEAIKEAMWLQGMVEELGIQQKVLTVFCDNQSTIHLTRNQVFHERSKHIDVKLHFVRDVVTKGSITVKKIPTEENPADMLTKAL 1383
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A6A4CLK4_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=10 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CLK4_9STRA) HSP 1 Score: 186 bits (472), Expect = 5.190e-51 Identity = 116/335 (34.63%), Postives = 177/335 (52.84%), Query Frame = 1 Query: 19 DACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLD--QHFYAESIVREGMGSAEVRNTSSSLNPGMDLTARR---TDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGIL-KGVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTKRLRKKQVE 1005 D C+YVKRSK+G + V YVDD+ + EEI +K+ L ++ ++LG ++G+ I D TL Y + +V E G + + G+ L+ + TD E+ R KPYR+++G L++ TRPDI+ V +L R+ +P +HW L YL T + GI Y G L Y D+DWG RR +G +++ AP+ +KSK Q V SS+E E A+ ++ ++ +L +G L + T + DN+GAI G++ RT+HVDI+ FT E V +G +V+Y+ T QLADILTK L K ++ Sbjct: 171 DQCVYVKRSKNGFIYVCL-YVDDMIIAAKTSEEIRDVKDALKNAFKMKELGPAKFILGMEIDHDMTAGTLKIKPTRYIDDVV-EHFGQENAKPVDNPCAAGLKLSKTQSPGTDAEQNAMRSKPYRSLIGCLLYITTCTRPDIAFVVTQLSRFLENPEKQHWNAAVRVLRYLKSTLQHGIIYHGGTHTVT--LKAYSDADWGTSLDDRRSGSGVMVMTGNAPVVFKSKFQRTVALSSAEAEYMALSLCVQEVLWTRAMLTVMGTLQRNATTIWEDNQGAIALVHNAGYHARTKHVDIRHHFTTENVERGTVKVEYVDTKNQLADILTKALGTKTLK 501
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Match: A0A8J6D8H8_9ROSI (Integrase catalytic domain-containing protein n=5 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D8H8_9ROSI) HSP 1 Score: 192 bits (487), Expect = 6.250e-51 Identity = 109/327 (33.33%), Postives = 181/327 (55.35%), Query Frame = 1 Query: 16 FDACLYVKRSKDGRVAVLFHYVDDITLTGNYHEEITRMKNNLLTKYEGRDLGTPDKLVGVAITRDE--AGITLDQHFYAESIVREGMGSAEVRNTSSSLNPGMDLTAR---RTDEEELDQRHKPYRTILGKLMFQAGMTRPDISNSVRELGRYGASPCDRHWKGLQHAL*YLAGTTKVGIHYPAGGEMDNGGLVGYGDSDWGNDTASRRIVTGYLILMNGAPIAWKSKMQGAVTTSSSEVE*TAMVHGIRHAIFLIGILGELGILKGVTAWYGDNRGAIQAAITEGFNGRTRHVDIKLKFTREYVSKGVFRVKYIPTALQLADILTK 981 +D C+Y+++ D L YVDD+ + +EI ++K L ++E +DLG K++G+ I+RD+ + L+Q Y + +++ + ++ S+ L + L A+ +T+EE PY +G LM+ TRPDIS +V + RY P HW+ ++ L YL T VG+ + + +VGY DSD+ D RR TGYL + AP++WKS +Q V S++E E A+ ++ AI+L G+L +LGI++ + Y D++ AI A + ++ RT+H+D++ F RE KG ++ IPTA AD++TK Sbjct: 958 YDNCVYLQKLHDRSFIYLLLYVDDMLIASKSQKEIDKLKAQLNEEFEMKDLGEAKKILGMEISRDKQRGKLCLNQKQYLKKVLQCFGVNENTKHVSTPLASHLKLNAQLSPKTEEEREYMAKVPYANAVGSLMYAMVCTRPDISQAVGVVSRYMHDPGKGHWQAVKWILRYLRKTVDVGLVFEQDEALGQF-VVGYVDSDFAGDLDKRRSTTGYLFTLAKAPVSWKSTLQSTVAISTTEAEYMAVTEAVKEAIWLNGLLEDLGIVQSHISLYCDSQSAIHLAKNQVYHSRTKHIDVRYHFVREVFEKGKILLQKIPTADNPADMMTK 1283 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10334.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10334.2.1 >prot_C-tenellus_contig10334.2.1 ID=prot_C-tenellus_contig10334.2.1|Name=mRNA_C-tenellus_contig10334.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=128bp MKNNLLTKYEGRDLGTPDKLVGVAITRDEAGITLDQHFYAESIVREGMGSback to top mRNA from alignment at C-tenellus_contig10334:4327..5340- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10334.2.1 ID=mRNA_C-tenellus_contig10334.2.1|Name=mRNA_C-tenellus_contig10334.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1014bp|location=Sequence derived from alignment at C-tenellus_contig10334:4327..5340- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10334:4327..5340- >mRNA_C-tenellus_contig10334.2.1 ID=mRNA_C-tenellus_contig10334.2.1|Name=mRNA_C-tenellus_contig10334.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=384bp|location=Sequence derived from alignment at C-tenellus_contig10334:4327..5340- (Choristocarpus tenellus KU2346)back to top |