mRNA_C-tenellus_contig10328.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10328.1.1 vs. uniprot
Match: A0A6C0HYZ4_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HYZ4_9ZZZZ) HSP 1 Score: 218 bits (555), Expect = 1.020e-61 Identity = 135/292 (46.23%), Postives = 173/292 (59.25%), Query Frame = 3 Query: 237 SIGSSEPPAWGWSKEEPKSSLRHLQSPLPKSQAWSANPLVLNLVQLFHWALSVPAILISLSVLRKMDFWLGDGIFGGSKERLLLLLLSPVIGFVGGLLPAIMMHEYEGWQVAPFKNPLL-EKFD----IRDNNNQLVREVAYRLVLLMQFIGLQTFSLAVLGFGFFNGTLLTLSIAGMLSAYLGNQKWKATF-YLFDQ----STFPVAWLTLIPFSAAMMLNLYAFHAIGN-------SAVGMLALLPTLLIFFGGVLESLLVETRFNQWCHVGAVAIMNAGIWLQWAIVRK 1061 S+G P+WGW+K EPK+SL + +AN +LNLV+L HW +PA L++ S+L D W F K+R LL LLSP+I F GGL P IMMH YEGWQVAPF +PL E+ D + D NNQ +R VAY + MQ+IGLQ FS AVLG +F G L LS+ G YLGNQ +KATF + + Q STFP+AW TL+PF + LN+YAF +G S + LA P +LI GG +E L ET F+Q H AV + NAG WLQ ++ + Sbjct: 22 SVGFPSNPSWGWNKAEPKTSLYEI------GMGHTANTFMLNLVELVHWTPIIPAFLMAQSILNNSDNW--TNYFDNDKQRTLLFLLSPIIAFFGGL-PGIMMHTYEGWQVAPFDSPLRGEQEDTNVIVSDKNNQWLRIVAYFFIFNMQYIGLQAFSYAVLGPTYFYGYLKFLSVLGFFVGYLGNQDYKATFNFKWGQTAGGSTFPLAWTTLVPFMLSASLNMYAFSDLGGLVYPGYFSVIRSLA--PPVLIALGGAIEGLFAETVFDQKIHAFAVILFNAGFWLQLIMITR 302
BLAST of mRNA_C-tenellus_contig10328.1.1 vs. uniprot
Match: A0A6C0DEU1_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DEU1_9ZZZZ) HSP 1 Score: 216 bits (551), Expect = 3.330e-61 Identity = 134/290 (46.21%), Postives = 170/290 (58.62%), Query Frame = 3 Query: 237 SIGSSEPPAWGWSKEEPKSSLRHLQSPLPKSQAWSANPLVLNLVQLFHWALSVPAILISLSVLRKMDFWLGDGIFGGSKERLLLLLLSPVIGFVGGLLPAIMMHEYEGWQVAPFKNPLLEKFD-----IRDNNNQLVREVAYRLVLLMQFIGLQTFSLAVLGFGFFNGTLLTLSIAGMLSAYLGNQKWKATF-YLFDQ----STFPVAWLTLIPFSAAMMLNLYAFHAIGNSAVG-----MLALLPTLLIFFGGVLESLLVETRFNQWCHVGAVAIMNAGIWLQWAIVRK 1061 SIG P+WGWSK PK SL + A +AN +LNLV+L HW +PA L++ S+L D W F ++R LL LLSP+I F GGL P IMMH YEGWQVAPF +PL + + + D NNQ +R VAY + MQ+IGLQTFS AVLG +F G L LS+ G YLGNQ +KATF + + Q STFP+AW TLIPF + LN+YAF +G + +L P LLI GG +E L ET F+Q H AV + N G WL+ ++ K Sbjct: 19 SIGFPSNPSWGWSKAAPKKSLYDI------GMAHTANAFMLNLVELVHWTPIIPAFLMAQSILNNSDKW--TNYFDNDEQRTLLFLLSPIIAFFGGL-PGIMMHTYEGWQVAPFDSPLRGETENTNVVVSDKNNQWLRIVAYFFIFNMQYIGLQTFSYAVLGPSYFYGCLKFLSVLGFFIGYLGNQDYKATFIFKWKQTAGGSTFPLAWATLIPFILSASLNMYAFTDLGGLVFPGYFSVIHSLTPPLLIGLGGAIEGLFAETIFDQKIHAFAVILFNLGFWLELNMIVK 299
BLAST of mRNA_C-tenellus_contig10328.1.1 vs. uniprot
Match: A0A6C0CYM3_9ZZZZ (Uncharacterized protein n=2 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CYM3_9ZZZZ) HSP 1 Score: 210 bits (534), Expect = 8.860e-59 Identity = 130/283 (45.94%), Postives = 164/283 (57.95%), Query Frame = 3 Query: 258 PAWGWSKEEPKSSLRHLQSPLPKSQAWSANPLVLNLVQLFHWALSVPAILISLSVLRKMDFWLGDGIFGGSKERLLLLLLSPVIGFVGGLLPAIMMHEYEGWQVAPFKNPL---LEKFDI--RDNNNQLVREVAYRLVLLMQFIGLQTFSLAVLGFGFFNGTLLTLSIAGMLSAYLGNQKWKATFYL-----FDQSTFPVAWLTLIPFSAAMMLNLYAFHAIGNSAVG-----MLALLPTLLIFFGGVLESLLVETRFNQWCHVGAVAIMNAGIWLQWAIVRK 1061 P+WGW+K PK SL + A +AN +LNLV+ HWA +PA +++ S+L D W F K+R LL LLSP+I F GGL P IMMH YEGWQVAPF +PL LE ++ +NNNQ +R VAY + MQ+IGLQ FS A+LG FNG L LSI G L YLG+Q++KATF STFP+AW TL+PF + LNLYAF G + +L P I GG +E L ET F+Q H AV + N G WLQ ++ K Sbjct: 20 PSWGWNKAAPKKSLYEI------GMAKTANNFMLNLVEFVHWAPLIPAFMMAQSILNYSDEW--TIYFNNDKQRTLLFLLSPIIAFFGGL-PGIMMHTYEGWQVAPFDSPLRGGLEDTNVVVSENNNQWLRIVAYFFIFNMQYIGLQAFSYAILGPNSFNGWLKFLSIMGFLIGYLGDQQYKATFNFKWGNTAGGSTFPLAWTTLLPFIMSASLNLYAFSEFGKLVYPGPFHIINSLAPPTFIALGGAIEGLFAETIFDQKIHAFAVILFNTGFWLQLNMITK 293
BLAST of mRNA_C-tenellus_contig10328.1.1 vs. uniprot
Match: K0STF3_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STF3_THAOC) HSP 1 Score: 191 bits (485), Expect = 4.330e-52 Identity = 120/255 (47.06%), Postives = 153/255 (60.00%), Query Frame = 3 Query: 240 IGSSEPPAWGWSKEEPKSSL---RHLQSPLPKSQAWSANPLVLNLVQLFHWALSVPAILISLSVLRKMDFWLGDGIFGGSKERLLLLLLSPVIGFVGGLLPAIMMHEYEGWQVAPFKNPLLE-KFDIRDNNNQLVREVAYRLVLLMQFIGLQTFSLAVLGFGFFNGTLLTLSIAGMLSAYLGNQKWKATFYLFDQSTFPVAWLTLIPFSAAMMLNLYAFHAIGNSAVGML--------ALLPTLLIFFGGVLESL 968 +G + PAWGW K PKSSL + L LP Q+ +A LNLVQL HW +PA+L++ +V DFW DGIF K R LL+LLSP+I F GGL P IMMH YE WQVAPFKNPL + F I D NNQ +R VAY+ + +MQ++GL TF+L VLG+ F SI G L YLGNQ K +F LF +T P++W T+ F ++ NL AF +G + L ++L LLI GGV+E L Sbjct: 29 LGFPDNPAWGWDKAPPKSSLSDPKELGPDLPPDQSKTAKQFNLNLVQLVHWTPIIPAVLMAKNVYFYSDFW--DGIFDNDKRRSLLMLLSPIIAFFGGL-PGIMMHTYESWQVAPFKNPLDDPNFKISDFNNQWLRIVAYQFIFVMQYVGLITFALGVLGYDFL-ANFKIWSILGFLVGYLGNQHPKISFSLFQHNTMPLSWYTIGAFGFGVICNLLAFIKLGEYSFPDLKGADRLIKSVLAPLLIAAGGVIEGL 279
BLAST of mRNA_C-tenellus_contig10328.1.1 vs. uniprot
Match: A0A7G8E5X4_9SYNE (Putative membrane protein n=3 Tax=unclassified Synechococcus TaxID=2626047 RepID=A0A7G8E5X4_9SYNE) HSP 1 Score: 168 bits (426), Expect = 1.050e-43 Identity = 116/289 (40.14%), Postives = 163/289 (56.40%), Query Frame = 3 Query: 198 MTASGPNGNEDFSSIGSSEPPAWGWSKEEPKSSLRHLQSPLPK-SQAWSANPLVLNLVQLFHWALSVPAILISLSVLRKMDFWLGDGIFGGSKERLLLLLLSPVIGFVGGLLPAIMMHEYEGWQVAPFKNPLLEKFDIRDNNNQLVREVAYRLVLLMQFIGLQTFSLAVLGFGFFNGTLLTLSIAGMLSAYLGNQKWKATFYLFDQSTFPVAWLTLIPFSAAMMLNLYAFHAI-GNSAVG-----MLALLPTLLIFFGGVLESLLVETRFNQWCHVGAVAIMNAGIWLQ 1043 MT+ N D S+G P W W K PK+SL + + L + ++ W +LNLV+L HW +P ++S + + + + GGS R+ LLLLSP+I GGL+ I MHEYEGWQVA FKNPL F + NN+ +REVAY+L+ ++Q +GL FSLAV GF + +T ++ L A++G Q KATF DQ FP+A L+ F A +N A+ A+ G+ V LA L LL+ GG++E +L E+ FNQW H AV +N G+ Q Sbjct: 1 MTSDRITDNTD-PSLGYYPSPGWEWQKPAPKASL--VANKLDRFAKGW-----ILNLVELVHWLPFIPTFILSFLIFQHSEDL--RPLLGGSDLRVFLLLLSPLIQTFGGLM-GITMHEYEGWQVAFFKNPLDSDFAVDHYNNEWLREVAYKLLFVLQGLGLLAFSLAVFGF---SAITITFAVLSGLIAFIGPQNPKATFSFNDQPVFPLAISILVVFIANASVNFIAYFALLGDPLVAEGLPRALAALAPLLLMLGGMIEGILAESSFNQWWHFTAVVFLNLGMVAQ 275
BLAST of mRNA_C-tenellus_contig10328.1.1 vs. uniprot
Match: A0A6I5R9Y5_9CYAN (Uncharacterized protein n=2 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=A0A6I5R9Y5_9CYAN) HSP 1 Score: 167 bits (422), Expect = 3.720e-43 Identity = 103/268 (38.43%), Postives = 151/268 (56.34%), Query Frame = 3 Query: 258 PAWGWSKEEPKSSLRHLQSPLPKSQAWSANPLVLNLVQLFHWALSVPAILISLSVLRKMDFWLGDGIFGGSKERLLLLLLSPVIGFVGGLLPAIMMHEYEGWQVAPFKNPLLEKFDIRDNNNQLVREVAYRLVLLMQFIGLQTFSLAVLGFGFFNGTLLTLSIAGMLSAYLGNQKWKATFYLFDQSTFPVAWLTLIPFSAAMMLNLYAFHAIGNSAVG------MLALLPTLLIFFGGVLESLLVETRFNQWCHVGAVAIMNAGIWLQ 1043 P W W K EPK+ L + A A +LNLV+L HW L +P+ ++S + + + G+ ++ LL ++PVI GL+ A++MHEYEGWQV FKNPL F I D NN+ +REVAY+++ +Q +GL FSL V GF F +TL+I ++ ++G Q KATFY +Q FP+A ++ F ++N A+ + + A+ +LA L LL GGV+E +L E+ FNQW H GAV +N G+ Q Sbjct: 20 PGWEWQKPEPKTYL------VKHDLAQYARVWILNLVELVHWILLIPSFILSFIIFQHTEILTARL---GTDLQVYLLSIAPVIQAFAGLV-AVVMHEYEGWQVVYFKNPLDSDFKIEDFNNEWLREVAYKMLFFLQVVGLLAFSLGVFGFSKF---FITLAIISLVLGFIGPQNPKATFYFNEQPVFPIAISLVVVFIVNAIVNFVAYFHLFSPALEAANLPIILAGLAPLLFMLGGVIEGVLAESTFNQWIHFGAVIFLNLGLLAQ 274
BLAST of mRNA_C-tenellus_contig10328.1.1 vs. uniprot
Match: A0A1Z3HJW1_9CYAN (Uncharacterized protein n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HJW1_9CYAN) HSP 1 Score: 164 bits (414), Expect = 4.990e-42 Identity = 103/275 (37.45%), Postives = 159/275 (57.82%), Query Frame = 3 Query: 237 SIGSSEPPAWGWSKEEPKSSLRHLQSPLPKSQAWSANPLVLNLVQLFHWALSVPAILISLSVLRKMDFWLGDGIFGGSKERLLLLLLSPVIGFVGGLLPAIMMHEYEGWQVAPFKNPLLEKFDIRDNNNQLVREVAYRLVLLMQFIGLQTFSLAVLGFGFFNGTLLTLSIAGMLSAYLGNQKWKATFYLFDQSTFPVAWLTLIPFSAAMMLNLYAFHAIGNSAVGM------LALLPTLLIFFGGVLESLLVETRFNQWCHVGAVAIMNAGIWLQ 1043 S+G P W W K EPK+ L+ + A A +LNLV++ HW L VP+ ++S + + D L + + G+ ++ LL ++P+I GL+ A++MHEYEGWQVA FKNPL FDI++ NN+ +REVAY+++ +Q +GL FSL V G N + ++A ++ A+L Q KATF +Q FP+A ++ F ++N A++ + + A+ + LA L LL GGV+E + E+ FNQW H GAV +N G+ +Q Sbjct: 14 SLGYYPNPGWEWQKPEPKTYLKE------HNLAQYARVWILNLVEIVHWILLVPSFILSFIIFQHGDA-LAERL--GTDIQVYLLSVAPLIQAFAGLV-AVVMHEYEGWQVAYFKNPLDTDFDIKNFNNEWLREVAYKMLFFLQIVGLLAFSLGVFGI---NKVSIAFAVASIVLAFLAPQNPKATFTFNNQPVFPIATALVVIFIVNAIVNFIAYYYLFSPALQLAQLPRILAGLAPLLFMMGGVIEGVFAESTFNQWIHFGAVIFLNLGLLVQ 275
BLAST of mRNA_C-tenellus_contig10328.1.1 vs. uniprot
Match: A0A552JW19_9CHRO (Uncharacterized protein n=1 Tax=Microcystis wesenbergii Mw_QC_S_20081001_S30D TaxID=2486245 RepID=A0A552JW19_9CHRO) HSP 1 Score: 162 bits (411), Expect = 1.270e-41 Identity = 104/271 (38.38%), Postives = 157/271 (57.93%), Query Frame = 3 Query: 258 PAWGWSKEEPKSSLRHLQSPLPK-SQAWSANPLVLNLVQLFHWALSVPAILISLSVLRKMDFWLGDGIFGGSKERLLLLLLSPVIGFVGGLLPAIMMHEYEGWQVAPFKNPLLEKFDIRDNNNQLVREVAYRLVLLMQFIGLQTFSLAVLGFGFFNGTLLTLSIAGM--LSAYLGNQKWKATFYLFDQSTFPVAWLTLIPFSAAMMLNLYAFHAIGNSAVG------MLALLPTLLIFFGGVLESLLVETRFNQWCHVGAVAIMNAGIWLQ 1043 P W W K EPK+ L ++ L K +QAW +LNLV+ HW L VP+ ++S + + L + G+ ++ LL ++P+I GL+ A++MHEYEGWQV FKNPL F+I+D NN+ +RE+AY+++ +Q +GL FSL V G T LTL A + L +LG Q KATF ++DQ FP++ ++ F ++N A++ + +SA+ +LA LL GG++E + E+ FNQW H GAV +N G+ Q Sbjct: 20 PGWEWQKPEPKAYL--VKHDLDKYAQAW-----ILNLVEFVHWILLVPSFILSFLIFQHSGM-LASKL--GTDIQVYLLSIAPIIQSFAGLV-AVVMHEYEGWQVVCFKNPLDSDFNIKDFNNEWLREIAYKMLFFLQILGLLAFSLGVFGL-----TKLTLVFAAVSILIGFLGPQNPKATFNIYDQPVFPISRWLVVVFIVNAIVNFVAYYYLFSSALEAANLSTILAGFAPLLFMIGGIIEGVFAESTFNQWIHFGAVIFLNLGLLTQ 274
BLAST of mRNA_C-tenellus_contig10328.1.1 vs. uniprot
Match: A0A166UBI7_9CYAN (Uncharacterized protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A166UBI7_9CYAN) HSP 1 Score: 162 bits (411), Expect = 1.490e-41 Identity = 113/271 (41.70%), Postives = 152/271 (56.09%), Query Frame = 3 Query: 258 PAWGWSKEEPKSSLRHLQSPLPK-SQAWSANPLVLNLVQLFHWALSVPAILISLSVLRKMDFWLGDGIFGGSKERLLLLLLSPVIGFVGGLLPAIMMHEYEGWQVAPFKNPLLEKFDIRDNNNQLVREVAYRLVLLMQFIGLQTFSLAVLGFGFFNGTLLTLSIAGMLSAYLGNQKWKATFYLFD-QSTFPVAWLTLIPFSAAMMLNLYA-FH------AIGNSAVGMLALLPTLLIFFGGVLESLLVETRFNQWCHVGAVAIMNAGIWLQ 1043 P W W K EPK+ L ++ L K ++ W +LNLV+L HW VPA ++S + + G+ ++ LL ++P+I GGL IMMHEYEGWQV FKNPL FDI+D NN+ +REVAY+L+ ++Q GL FSL V G N LT +I + A++G Q KAT Y D Q FP+A L+ F ++N A FH A N V + L PTLL+ GGV+E +L E+ FNQW H AV +N GI +Q Sbjct: 25 PGWEWQKPEPKTYL--VEQDLAKYARGW-----ILNLVELVHWLPFVPAFILSFLIFQHSSALKA---ILGTDIQVFLLAIAPIIQTFGGL-TGIMMHEYEGWQVVHFKNPLDSDFDIKDFNNEWLREVAYKLLFVLQGAGLLAFSLGVFGI---NKITLTFAIVSGIVAFIGPQNPKATIYPIDNQPVFPLAVSILVVFIVNAIVNFVAYFHLFTPALAAANLPVVLAGLAPTLLML-GGVVEGILAESTFNQWWHFTAVIFLNLGIIVQ 280
BLAST of mRNA_C-tenellus_contig10328.1.1 vs. uniprot
Match: A0A6I5P8F3_9CYAN (Uncharacterized protein n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5P8F3_9CYAN) HSP 1 Score: 161 bits (407), Expect = 4.710e-41 Identity = 112/283 (39.58%), Postives = 157/283 (55.48%), Query Frame = 3 Query: 216 NGNEDFSSIGSSEPPAWGWSKEEPKSSLRHLQSPLPK-SQAWSANPLVLNLVQLFHWALSVPAILISLSVLRKMDFWLGDGIFGGSKERLLLLLLSPVIGFVGGLLPAIMMHEYEGWQVAPFKNPLLEKFDIRDNNNQLVREVAYRLVLLMQFIGLQTFSLAVLGFGFFNGTLLTLSIAGMLSAYLGNQKWKATFYLFDQSTFPVAWLTLIPFSAAMMLNLYAFHAIGNSAVG------MLALLPTLLIFFGGVLESLLVETRFNQWCHVGAVAIMNAGIWLQ 1043 N N D S+G P W W K E K+ L ++ L K ++AW +LNLV+L HW VP ++S + + + G S ++ LLLLSP++ GGL+ I MHEYEGWQV F+NPL F+IRD NN+ +REVAY+L+ LMQ GL FSL V G N LT +I + A++G Q KATF Q FP++ L+ F ++N A+ + NSA+ LA + +L+ GGV+E ++ E+ FNQW H AV +N G+ Q Sbjct: 7 NENSD-PSLGYYPRPGWEWQKPEAKTYL--VEHDLAKYARAW-----ILNLVELVHWLPFVPTFILSFLIFQHSSEL--HALLGSSDMQVFLLLLSPIVQTFGGLM-GITMHEYEGWQVVFFQNPLDTDFEIRDCNNEWLREVAYKLLFLMQGAGLLAFSLGVFGI---NKITLTFAIISGVIAFIGPQNPKATFNFNGQPVFPLSVSILVVFIINAIVNFVAYFFLFNSALVAVNLPVFLAGVAPILLMLGGVIEGVVAESTFNQWWHFTAVIFLNLGMVAQ 275 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10328.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10328.1.1 >prot_C-tenellus_contig10328.1.1 ID=prot_C-tenellus_contig10328.1.1|Name=mRNA_C-tenellus_contig10328.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=356bp MVLRLFQVVGVLVLPLCSQSLKLSPNLFNKPLVVSRPVDSPRSFGAGPANback to top mRNA from alignment at C-tenellus_contig10328:906..3929+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10328.1.1 ID=mRNA_C-tenellus_contig10328.1.1|Name=mRNA_C-tenellus_contig10328.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3024bp|location=Sequence derived from alignment at C-tenellus_contig10328:906..3929+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10328:906..3929+ >mRNA_C-tenellus_contig10328.1.1 ID=mRNA_C-tenellus_contig10328.1.1|Name=mRNA_C-tenellus_contig10328.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1068bp|location=Sequence derived from alignment at C-tenellus_contig10328:906..3929+ (Choristocarpus tenellus KU2346)back to top |