mRNA_C-tenellus_contig10316.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10316.1.1 vs. uniprot
Match: A0A6H5JKV5_9PHAE (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV5_9PHAE) HSP 1 Score: 223 bits (567), Expect = 6.740e-68 Identity = 108/136 (79.41%), Postives = 120/136 (88.24%), Query Frame = 1 Query: 166 LSYKLSVNTSTDRADFQYGQFSVIRRFKDFVWLTQRLEEEFPGIVMPALPVKMNLGKFDQVFIEKRRKELEKFLNRVAGHDELSSSQYFKTFLQADDAGLADTKDKHKAEQAPVGARHVLKWWGEAVTHVKTHVDK 573 ++YK V+TSTDR DFQYGQF+VIRRFKDFVWL+ RLEEEFPG+VMPALPVKM +GKFDQ F+EKRRKELE FLNRVA H ELS+SQYFKTFLQADDAGLADTKDK KAE+ PVG HVL+W+GE THVKT VDK Sbjct: 48 ITYK--VHTSTDRPDFQYGQFTVIRRFKDFVWLSHRLEEEFPGMVMPALPVKMVVGKFDQTFVEKRRKELEIFLNRVAAHGELSASQYFKTFLQADDAGLADTKDKEKAERVPVGPHHVLRWFGEVATHVKTQVDK 181
BLAST of mRNA_C-tenellus_contig10316.1.1 vs. uniprot
Match: A0A835Z9B1_9STRA (Sorting nexin 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9B1_9STRA) HSP 1 Score: 143 bits (360), Expect = 9.670e-38 Identity = 76/138 (55.07%), Postives = 97/138 (70.29%), Query Frame = 1 Query: 166 LSYKLSVNTSTDRADFQYGQFSVIRRFKDFVWLTQRLEEEFPGIVMPALPVKMNLGKFDQVFIEKRRKELEKFLNRVAGHDELSSSQYFKTFLQADDAGLADTKDK----HKAEQAPVGARHVLKWWGEAVTHVKTHV 567 ++YK +NT+TDR DFQYGQFSVIRRFKDFVWL++RL EEFPG++ P LP K L +FD IE+RR ELE +L RVA H ELS + F FLQADDA +AD K++ K ++ GA + + WG AVT VK+ + Sbjct: 18 ITYK--INTTTDRPDFQYGQFSVIRRFKDFVWLSERLGEEFPGVINPPLPDKETLKRFDPEHIERRRVELEHYLGRVAAHGELSGAPVFMAFLQADDAAMADKKEEAKVARKEDKGGPGAE-LKRHWGWAVTMVKSQM 152
BLAST of mRNA_C-tenellus_contig10316.1.1 vs. uniprot
Match: A0A7S3JUY8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUY8_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.240e-35 Identity = 68/133 (51.13%), Postives = 91/133 (68.42%), Query Frame = 1 Query: 166 LSYKLSVNTSTDRADFQYGQFSVIRRFKDFVWLTQRLEEEFPGIVMPALPVKMNLGKFDQVFIEKRRKELEKFLNRVAGHDELSSSQYFKTFLQADDAGLADTKDKHKAEQAPV---GARHVLKWWGEAVTHV 555 +SYK VNT T+ +F YGQFSVIRR+ DF+WL+++L + PG ++P LP K +G+F FIE RR+ LEKFLNR+ HDELS+S+YF+ FLQADD GLA K + KAEQ V G + W+ E + + Sbjct: 37 ISYK--VNTQTNLPEFNYGQFSVIRRYSDFIWLSEQLARDVPGAIVPPLPEKAVVGRFSAEFIESRRRLLEKFLNRLGAHDELSASKYFRLFLQADDGGLASAKAERKAEQIAVKKSGLSGISNWFDETMNSI 167
BLAST of mRNA_C-tenellus_contig10316.1.1 vs. uniprot
Match: A0A8J2WT43_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WT43_9STRA) HSP 1 Score: 125 bits (315), Expect = 6.710e-31 Identity = 59/111 (53.15%), Postives = 81/111 (72.97%), Query Frame = 1 Query: 166 LSYKLSVNTSTDRADFQYGQFSVIRRFKDFVWLTQRLEEEFPGIVMPALPVKMNLGKFDQVFIEKRRKELEKFLNRVAGHDELSSSQYFKTFLQADDAGLADTKDKHKAEQ 498 +SYK VNT+T+R +F YGQF VIRR+ DF WL+ RL + PG ++P LP K +G+F F+E RR++LE+FL + A H+ELS S YF+TFLQADDAGL + K + K ++ Sbjct: 37 VSYK--VNTATNREEFSYGQFGVIRRYSDFAWLSDRLARDVPGAIVPPLPDKAVVGRFGADFVESRRRQLERFLQQTAEHEELSKSHYFQTFLQADDAGLLNAKAEAKVQE 145
BLAST of mRNA_C-tenellus_contig10316.1.1 vs. uniprot
Match: F0YAT7_AURAN (PX domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAT7_AURAN) HSP 1 Score: 124 bits (311), Expect = 1.420e-30 Identity = 64/113 (56.64%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 166 LSYKLSVNTSTDRADFQYGQFSVIRRFKDFVWLTQRLEEEFPGIVMPALPVKMNLGKFDQVFIEKRRKELEKFLNRVAGHDELSSSQYFKTFLQADDAGLADTKDKHK-AEQA 501 +SYK VNT T+ +FQYGQFSVIRR+ DFVWL L+++ PG ++P LP K +G+F F+E RR+ LEKF R+A H+ELS S+YFK FLQADDAGL+ K + K AE+A Sbjct: 19 ISYK--VNTQTNLPEFQYGQFSVIRRYSDFVWLHDMLQKDVPGSIVPPLPEKAVVGRFSADFVESRRRLLEKFCVRLAAHEELSDSKYFKLFLQADDAGLSVAKAEQKLAEKA 129
BLAST of mRNA_C-tenellus_contig10316.1.1 vs. uniprot
Match: A0A067BX66_SAPPC (PX domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BX66_SAPPC) HSP 1 Score: 105 bits (263), Expect = 2.140e-23 Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = 1 Query: 166 LSYKLSVNTSTDRADFQYGQFSVIRRFKDFVWLTQRLEEEFPGIVMPALPVKMNLGKFDQVFIEKRRKELEKFLNRVAGHDELSSSQYFKTFLQADDAGLA----DTKDKHKAEQAPVGARHVLKWWGEAV 546 +SYK+S T+TDR FQ GQFSV+RRF DFVWL L FPG+++P LP K+ +G+F FIE RR+ L FL R A H E+ S+Y FL+A D L+ D K K + + G + +W+ + + Sbjct: 54 ISYKIS--TTTDRRQFQKGQFSVVRRFSDFVWLHASLCSLFPGVIVPPLPEKLLVGRFSPEFIEARRRALHLFLRRCAVHPEIQHSEYLTVFLEASDESLSAFKHDVLAKSKGKSSSGGG--LFQWFDDTI 180
BLAST of mRNA_C-tenellus_contig10316.1.1 vs. uniprot
Match: A0A7S2FTK2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FTK2_9STRA) HSP 1 Score: 103 bits (257), Expect = 6.370e-23 Identity = 52/104 (50.00%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 166 LSYKLSVNTSTDRADFQYGQFSVIRRFKDFVWLTQRLEEEFPGIVMPALPVKMNLGKFDQVFIEKRRKELEKFLNRVAGHDELSSSQYFKTFLQADDAGLADTK 477 +SYK VNT T D+ Y QFSVIRR+ DFVW+ + L PG ++P LP K + +F F+E RR+ LE+FLNR A H L+ FKTFLQADD L+ K Sbjct: 70 ISYK--VNTETSLPDYDYKQFSVIRRYSDFVWVREALLSHLPGAIIPPLPEKAVMNRFSPEFVESRRRALERFLNRCASHPLLAVHSTFKTFLQADDERLSKAK 171
BLAST of mRNA_C-tenellus_contig10316.1.1 vs. uniprot
Match: A0A1V9Z5R4_9STRA (Sorting nexin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5R4_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.970e-22 Identity = 55/131 (41.98%), Postives = 81/131 (61.83%), Query Frame = 1 Query: 166 LSYKLSVNTSTDRADFQYGQFSVIRRFKDFVWLTQRLEEEFPGIVMPALPVKMNLGKFDQVFIEKRRKELEKFLNRVAGHDELSSSQYFKTFLQADDAGLADTKD----KHKAEQAPVGARHVLKWWGEAV 546 +SYK + T+T+R F+ QFSVIRRF DFVWL L +PG+++P LP K+ +G+F F+E RR+ L+ FL+R A H E+ +S+YF FL+A D L K K KA+ A G + +W+ + + Sbjct: 48 ISYK--ITTNTERRQFKMPQFSVIRRFSDFVWLHGSLCSLYPGVIVPPLPEKLLVGRFSPEFVESRRRALQVFLSRCAVHPEIQNSEYFTVFLEAQDDALQHFKQEALTKSKAKHAGSGMG-LFQWFDDTI 175
BLAST of mRNA_C-tenellus_contig10316.1.1 vs. uniprot
Match: W4FQ38_9STRA (PX domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQ38_9STRA) HSP 1 Score: 102 bits (253), Expect = 2.290e-22 Identity = 54/113 (47.79%), Postives = 69/113 (61.06%), Query Frame = 1 Query: 166 LSYKLSVNTSTDRADFQYGQFSVIRRFKDFVWLTQRLEEEFPGIVMPALPVKMNLGKFDQVFIEKRRKELEKFLNRVAGHDELSSSQYFKTFLQADDAGLADTK-DKHKAEQA 501 +SYK + TSTDR FQ QFSVIRRF DFVWL L ++PG+V+P LP K+ +G+F F+E RR+ L FL R H E+ S + TFL+A D L K DK K + Sbjct: 82 ISYK--ITTSTDRRQFQKSQFSVIRRFSDFVWLHASLCAQYPGVVVPPLPEKLLVGRFSPEFVESRRRALHLFLCRCGAHPEIQHSDHLTTFLEASDDALTHFKADKAKGSSS 192
BLAST of mRNA_C-tenellus_contig10316.1.1 vs. uniprot
Match: A0A7S2CHT8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHT8_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.290e-22 Identity = 52/105 (49.52%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 166 LSYKLSVNTSTDRADFQYGQFSVIRRFKDFVWLTQRLEEEFPGIVMPALPVKMNLGKFDQVFIEKRRKELEKFLNRVAGHDELSSSQYFKTFLQADDAGLADTKD 480 +SYK VNT T ++ Y QFSVIRR+ DFVWL + L + PG ++P LP K + +F F+E RR+ LE+FLNR A H S ++ FKTFL ADD L TK+ Sbjct: 41 ISYK--VNTETTLEEYDYNQFSVIRRYSDFVWLRETLLKSLPGAIIPPLPEKAMMNRFAPEFVEGRRRALERFLNRCAEHPLASKNETFKTFLLADDDKLKKTKE 143 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10316.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10316.1.1 >prot_C-tenellus_contig10316.1.1 ID=prot_C-tenellus_contig10316.1.1|Name=mRNA_C-tenellus_contig10316.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=191bp SVGVQAQHYRLRPREAGSGHECLHYLQGGFFRITFQWSQFLLDLLVHLPAback to top mRNA from alignment at C-tenellus_contig10316:171..2590- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10316.1.1 ID=mRNA_C-tenellus_contig10316.1.1|Name=mRNA_C-tenellus_contig10316.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2420bp|location=Sequence derived from alignment at C-tenellus_contig10316:171..2590- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10316:171..2590- >mRNA_C-tenellus_contig10316.1.1 ID=mRNA_C-tenellus_contig10316.1.1|Name=mRNA_C-tenellus_contig10316.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=573bp|location=Sequence derived from alignment at C-tenellus_contig10316:171..2590- (Choristocarpus tenellus KU2346)back to top |