mRNA_C-tenellus_contig10205.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10205.1.1 vs. uniprot
Match: A0A6H5KC01_9PHAE (SUZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC01_9PHAE) HSP 1 Score: 135 bits (339), Expect = 3.540e-30 Identity = 99/228 (43.42%), Postives = 124/228 (54.39%), Query Frame = 2 Query: 470 IDPALIDALDNAREYLLKLERELTEFVQAEGGPQ--RLELPPRSSYQRLIAYRLASRFKLQKASAGVHQIQAGSASSMPTAATTYPKEHRP---------------------TVFLKTSDSCVPGILLATLAAXXXXXXXXXXXXXXXXXXXXXXVASTSLANSKGRSSVIKLMRRSPGDPRAPALGRGGSGGAGSEAQMKTVADRAKEYAAARARIFGTASPPAPAP 1084 +DPAL+DAL NAR+Y+LKLE EL FV + P+ L LPPRSSYQRLIAYRLA+RFKLQKA+A + +A P ATT P T F++ +DS VP +LL+ L A + ++A + + + IKLMRR+PGDPRAP +G G G E +KTV R +EYA ARARIFGT SPP P P Sbjct: 93 VDPALMDALGNARDYVLKLEGELVAFVTTKEDPKPPHLVLPPRSSYQRLIAYRLAARFKLQKANAAQEREAIVAAGMDP--ATTIGVASPPXXXXXXXXXXXXXXXXXAQKVTAFVRVADSAVPAVLLSALDAEAKRREAAEAV-----------ATAMAVAATGSKGAPIKLMRRNPGDPRAPNPHQG-QGNGGLEKHVKTVEVREREYAEARARIFGTKSPPLPTP 306
BLAST of mRNA_C-tenellus_contig10205.1.1 vs. uniprot
Match: D8LM72_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM72_ECTSI) HSP 1 Score: 104 bits (260), Expect = 3.720e-20 Identity = 81/193 (41.97%), Postives = 102/193 (52.85%), Query Frame = 2 Query: 470 IDPALIDALDNAREYLLKLERELTEFV--QAEGGPQRLELPPRSSYQRLIAYRLASRFKLQKASAGVHQIQAGSASSMPTAATTYPKEHRP--------------------TVFLKTSDSCVPGILLATLAAXXXXXXXXXXXXXXXXXXXXXXVASTSLANSKGRSSVIKLMRRSPGDPRAPALGRG-GSGG 979 +D AL+DAL NAR+Y+LKLE EL FV E P L LPPRSSYQRLIAYRLA+RFKLQKA+A + +A P ATT P T F++ +DS VP +LL+ L A +T++A + + + IKLMRRSPGDPRAP +G G+GG Sbjct: 383 VDSALMDALGNARDYVLKLEGELVAFVTNMEEPKPPHLVLPPRSSYQRLIAYRLAARFKLQKANAAQEREAIVAAGMDP--ATTIGVASPPXXXXXXXXXXXXXXXXXQKVTAFVRVADSAVPAVLLSALDAEAKRREAAEAV-----------ATATAVAATGSKGAPIKLMRRSPGDPRAPNPHQGQGNGG 562
BLAST of mRNA_C-tenellus_contig10205.1.1 vs. uniprot
Match: A0A7S2GQ35_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQ35_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.610e-14 Identity = 75/210 (35.71%), Postives = 101/210 (48.10%), Query Frame = 2 Query: 455 GSEGSIDPALIDALDNAREYL--LKLERELTEFVQAEGGPQRLELPPRSSYQRLIAYRLASRFKLQKASAGVHQIQAGSASSMPTAATTYPKEHRPTVFLKTSDSCVPGILLATLAAXXXXXXXXXXXXXXXXXXXXXXVASTSLANSKGRSSV----IKLMRRSPGDPRAPALGRGGSGGAG--SEAQMKTVADRAKEYAAARARIFGT 1060 G EG +DP L+DALDN R L LK E + F++A ++L+ PP SSYQR+ +RLA RF L S V + G Y +E R + KT S +P +LL L++ V T G + +KLM+R P + G G S G+G + Q KTV++R K+YAAARARIFGT Sbjct: 76 GVEGFVDPFLLDALDNPRNRLMILKFEDTIVNFMRA--PREQLDFPPLSSYQRMTLHRLAVRFNLAHQSVSVGPMVPG-----------YDRESRAIMLFKTPQSFIPEVLLINLSSKES-------------------VRPTGAGGVPGCVATPKKQVKLMKRDPANS-GGRRGGGHSNGSGRKDKNQAKTVSEREKDYAAARARIFGT 252
BLAST of mRNA_C-tenellus_contig10205.1.1 vs. uniprot
Match: W7TB05_9STRA (SUZ domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TB05_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 6.120e-10 Identity = 68/212 (32.08%), Postives = 92/212 (43.40%), Query Frame = 2 Query: 461 EGSIDPALIDALDNAREYL--LKLERELTEFVQAEGGPQRLELPPRSSYQRLIAYRLASRFKLQKASAGVHQIQAGSASSMPTAATTYPKEHRPTVFLKTSDSCVPGILLATLAAXXXXXXXXXXXXXXXXXXXXXXVASTSLANSKGRSSVIKLM--RRSPGDPRAPALGRGGSGGAGSEAQMKTV------ADRAKEYAAARARIFGTAS 1066 + +IDP L A+DN RE + L+ E + +F++A Q+LEL P SSY RL+ YRLA RF L A+ G AG +R F KT S +P +LL + ++ V++LM RR+PG G G+G E TV DR K YA ARARIFG++S Sbjct: 59 DAAIDPILTGAMDNPRERVNVLRYEDAMVQFMKAGTKQQQLELSPNSSYHRLVLYRLAHRFGLHGAAEGEVGADAGG--------------NRSVKFFKTPQSSIPHLLLIDTCGKEGVNG-----------------SGXXXXXXXAKAPVMRLMQRRRTPGGDSEAKEGAVRGKGSGEEKTSSTVNGARSVIDREKAYAEARARIFGSSS 239
BLAST of mRNA_C-tenellus_contig10205.1.1 vs. uniprot
Match: K3WHI7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHI7_GLOUD) HSP 1 Score: 72.0 bits (175), Expect = 9.000e-10 Identity = 73/217 (33.64%), Postives = 95/217 (43.78%), Query Frame = 2 Query: 422 AGAAAAVASATGSEGSIDPALIDALDNAREYL--LKLERELTEFVQAEGGPQRLELPPRSSYQRLIAYRLASRFKLQKASAGVHQI-QAGSASSMPTAATTYPKEHRPTVFLKTSDSCVPGILLATLAAXXXXXXXXXXXXXXXXXXXXXXVASTSLANSKGRSSVIKLMRRSPGDPRAPALGRGGSGGAGSEAQ--MKTVADRAKEYAAARARIFG 1057 A A+A ++ G +DP L+ LDN RE L LK E ++ F+++ PQ L PP SSY RLI +RLA R L+ +A + Q G R KTS S VP +LL L+A +S K+M R G R A GG GG G +A+ +T+ DR K YA ARARIFG Sbjct: 95 AATASAASALNGGGAPMDPVLVACLDNPRERLTVLKFEDQIVRFIRSSREPQ-LIFPPLSSYHRLIIHRLAERCCLEHQTADYNPYAQHGGYDG---------NSSRVVTLFKTSQSVVPSVLLIDLSADRQQPMVTP-------------------------ASAPKIMVRKRGTTRPGA--NGGRGGNGQDAKNAQRTMQDREKAYAEARARIFG 274
BLAST of mRNA_C-tenellus_contig10205.1.1 vs. uniprot
Match: A0A662WIY5_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIY5_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.630e-8 Identity = 69/214 (32.24%), Postives = 92/214 (42.99%), Query Frame = 2 Query: 425 GAAAAVASATGS-EGSIDPALIDALDNAREYL--LKLERELTEFVQAEGGPQRLELPPRSSYQRLIAYRLASRFKLQKASAGVHQIQAGSASSMPTAATTYPKEHRPTVFLKTSDSCVPGILLATLAAXXXXXXXXXXXXXXXXXXXXXXVASTSLANSKGRSSVIKLMRRSPGDPRAPALGRGGSGGAGSEAQMKTVADRAKEYAAARARIFG 1057 GA + V AT S G +DP L+ L+N+RE L LK E ++ F++ P L PP SSY RLI +RLA R L+ +A + + SA R KTS S VP +LL L+ +S K+M R G R A G G+G G +++ DR + YA ARARIFG Sbjct: 74 GAGSPVGPATASAHGPLDPVLVAGLENSRERLTLLKFEDQIVRFLKNPREPH-LNFPPLSSYHRLIVHRLAQRCALEHQTADYNPYEGSSA--------------RVVTLFKTSQSAVPRVLLIDLSTDRQTPAVTP-------------------------ASAPKIMVRKRGAQRPGANGGRGNGADGRA--TRSMQDRERAYAEARARIFG 245
BLAST of mRNA_C-tenellus_contig10205.1.1 vs. uniprot
Match: A0A662YFL1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFL1_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.850e-7 Identity = 62/200 (31.00%), Postives = 84/200 (42.00%), Query Frame = 2 Query: 464 GSIDPALIDALDNAREYL--LKLERELTEFVQAEGGPQRLELPPRSSYQRLIAYRLASRFKLQKASAGVHQIQAGSASSMPTAATTYPKEHRPTVFLKTSDSCVPGILLATLAAXXXXXXXXXXXXXXXXXXXXXXVASTSLANSKGRSSVIKLMRRSPGDPRAPALGRGGSGGAGSEAQMKTVADRAKEYAAARARIFG 1057 G +DP L+ L+N+RE L LK E ++ F++ P L PP SSY RLI +RLA R L+ +A + + SA R KT S VP +LL L+ +S K+M R G R A G G+G G +++ DR + YA ARARIFG Sbjct: 157 GPLDPVLVAGLENSRERLTLLKFEDQIVRFLKNPREPH-LNFPPLSSYHRLIVHRLAQRCALEHQTADYNPYEGSSA--------------RVVTLFKTPQSAVPRVLLIDLSTDRQTPAVTP-------------------------ASAPKIMVRKRGAQRPGANGGRGNGADGRA--TRSMQDRERAYAEARARIFG 314
BLAST of mRNA_C-tenellus_contig10205.1.1 vs. uniprot
Match: A0A485KN85_9STRA (Aste57867_9610 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KN85_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.000e-7 Identity = 64/210 (30.48%), Postives = 95/210 (45.24%), Query Frame = 2 Query: 470 IDPALIDALDNAREYL--LKLERELTEFVQAEGGPQRLELPPRSSYQRLIAYRLASRFKLQKASAGVHQIQAGSASSMPTAATTYPKEHRPTVFLKTSDSCVPGILLATLAAXXXXXXXXXXXXXXXXXXXXXXVASTSLANSKGRSSVI--KLMRRSPG------DPRAPALGRGGSGGAGSEAQMKTVADRAKEYAAARARIFGTASP 1069 +DP L+ AL+N RE L L+ E ++ F+++ + L PP SSY RLI +RLA R L+ ++ + + T A T KT+ +CVP +LL L+ +S A+S S K+M R P + +APA S+ + +T+ +R KEYAAARARIFG +P Sbjct: 103 LDPVLVAALENPRERLTLLQFEDQIVHFIRSSRDTE-LVFPPLSSYHRLIIHRLAERCVLEHQTSDFAAYNSMGYDTNTTRAVT---------LFKTAYTCVPSVLLINLSTE----------------------SSNPAASSAFSSHAAPPKIMTRKPNKNAAHKNQKAPA----------SDTKNRTIQEREKEYAAARARIFGEDAP 270
BLAST of mRNA_C-tenellus_contig10205.1.1 vs. uniprot
Match: A0A5D6XMK8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XMK8_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 3.300e-7 Identity = 70/214 (32.71%), Postives = 91/214 (42.52%), Query Frame = 2 Query: 422 AGAAAAVASATGSEGSIDPALIDALDNAREYL--LKLERELTEFVQAEGGPQRLELPPRSSYQRLIAYRLASRFKLQKASAGVHQIQAGSASSMPTAATTYPKEHRPTVFLKTSDSCVPGILLATLAAXXXXXXXXXXXXXXXXXXXXXXVASTSLANSKGRSSVIKLMRRSPGDPRAPALGRGGSGGAGSEAQMKTVADRAKEYAAARARIFG 1057 A AA A + GS G +DP LI L+N RE L LK E ++ F++ PQ L PP SSY RLI +RLA R L+ +A Q G+A A R KT S VPG+LL L+ S + + V K+M R PR A G G G A + +++ DR + YA IFG Sbjct: 59 ASAATAAHALDGSRGPLDPVLIACLENPRERLTLLKFEDQIVRFLKNPREPQ-LVFPPLSSYHRLIIHRLAERCCLEHQTADYGQYAPGAAYDGNAA--------RAVTLFKTGASVVPGVLLIDLS-------------------------SDRQQQTVTPAVVPKIMVRKRAAPRPGANGGRGPGDA--KNAQRSMQDRERAYAEXXXXIFG 236
BLAST of mRNA_C-tenellus_contig10205.1.1 vs. uniprot
Match: A0A8K1FCI7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCI7_PYTOL) HSP 1 Score: 63.2 bits (152), Expect = 5.610e-7 Identity = 65/214 (30.37%), Postives = 94/214 (43.93%), Query Frame = 2 Query: 434 AAVASATGSEGSIDPALIDALDNAREYL--LKLERELTEFVQAEGGPQRLELPPRSSYQRLIAYRLASRFKLQKASAGVHQIQA----GSASSMPTAATTYPKEHRPTVFLKTSDSCVPGILLATLAAXXXXXXXXXXXXXXXXXXXXXXVASTSLANSKGRSSVIKLMRRSPGDPRAPALGRGGSGGAGSEAQMKTVADRAKEYAAARARIFG 1057 AA +A+ G +DP L+ L+N RE L LK E ++ F++ Q L PP SSY RLI +RLA R L+ + + + G+AS + T KTS + +P +LL L+A A + + I + +R+ P A G G GGA A +++ DR + YA ARARIFG Sbjct: 96 AAATAASARFGPLDPVLLAGLENPRERLSVLKFEDQIVRFIKNPRENQ-LSFPPLSSYHRLIIHRLAERCCLEHQTGDYNPYSSQGYDGNASRVVT-------------LFKTSQTVIPRVLLIDLSAEKQQP-----------------------AVTPASAPKIMMRKRNTQHPGNGAAG--GRGGADGRATQRSIEDRERAYAEARARIFG 270 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10205.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10205.1.1 >prot_C-tenellus_contig10205.1.1 ID=prot_C-tenellus_contig10205.1.1|Name=mRNA_C-tenellus_contig10205.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=398bp MAMEEWETAVATLEIDPGHKESNGTLSAEKPPSSLGEAGGGSTGGSGGVNback to top mRNA from alignment at C-tenellus_contig10205:1587..5542+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10205.1.1 ID=mRNA_C-tenellus_contig10205.1.1|Name=mRNA_C-tenellus_contig10205.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3956bp|location=Sequence derived from alignment at C-tenellus_contig10205:1587..5542+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10205:1587..5542+ >mRNA_C-tenellus_contig10205.1.1 ID=mRNA_C-tenellus_contig10205.1.1|Name=mRNA_C-tenellus_contig10205.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1194bp|location=Sequence derived from alignment at C-tenellus_contig10205:1587..5542+ (Choristocarpus tenellus KU2346)back to top |