mRNA_C-tenellus_contig10201.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10201.1.1 vs. uniprot
Match: A0A6H5KVA0_9PHAE (Formate--tetrahydrofolate ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVA0_9PHAE) HSP 1 Score: 218 bits (554), Expect = 2.190e-65 Identity = 102/114 (89.47%), Postives = 110/114 (96.49%), Query Frame = 1 Query: 10 VQEKMNVVCREMYRASDVEWSPEAEEKVKVYEEAGYGKLPICVAKTQYSLSTDPAAKGAPTGHTVFVRDVRASVGAGFVYLLCGDINTIPGLPTRPGFYDVDIEFDTGRVVGLF 351 ++EKMN VCREMYRA+ VEWSPEAEEKV +YE+AGYGKLPICVAKTQYSLSTDP+AKGAP+GHTVFVRDVRASVGAGFVYLLCGDINTIPGLPTRPGFYDVDI+F TGRVVGLF Sbjct: 532 IKEKMNTVCREMYRAASVEWSPEAEEKVAIYEKAGYGKLPICVAKTQYSLSTDPSAKGAPSGHTVFVRDVRASVGAGFVYLLCGDINTIPGLPTRPGFYDVDIDFGTGRVVGLF 645
BLAST of mRNA_C-tenellus_contig10201.1.1 vs. uniprot
Match: D0RMJ3_PHYIT (Formate--tetrahydrofolate ligase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0RMJ3_PHYIT) HSP 1 Score: 164 bits (414), Expect = 1.540e-47 Identity = 74/114 (64.91%), Postives = 93/114 (81.58%), Query Frame = 1 Query: 10 VQEKMNVVCREMYRASDVEWSPEAEEKVKVYEEAGYGKLPICVAKTQYSLSTDPAAKGAPTGHTVFVRDVRASVGAGFVYLLCGDINTIPGLPTRPGFYDVDIEFDTGRVVGLF 351 + EK V+C+E+Y A VE+S EA++K+ VY + GYGKLP+C AKT SLSTDP KG PTG +V VRD+RASVGAGFVYLLCGD+ T+P LPTRPGFYDVD++ +TG+V+GLF Sbjct: 212 IPEKFEVICKEIYGADGVEFSEEAKKKLAVYSQRGYGKLPVCCAKTHLSLSTDPKPKGVPTGFSVTVRDIRASVGAGFVYLLCGDMMTVPALPTRPGFYDVDLDTETGKVIGLF 325
BLAST of mRNA_C-tenellus_contig10201.1.1 vs. uniprot
Match: A0A2P4X753_9STRA (Formate--tetrahydrofolate ligase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X753_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.730e-47 Identity = 77/114 (67.54%), Postives = 96/114 (84.21%), Query Frame = 1 Query: 10 VQEKMNVVCREMYRASDVEWSPEAEEKVKVYEEAGYGKLPICVAKTQYSLSTDPAAKGAPTGHTVFVRDVRASVGAGFVYLLCGDINTIPGLPTRPGFYDVDIEFDTGRVVGLF 351 + EK V+C+E+Y A VE+S EA++K+ VY + GYGKLP+C AKT SLST+PAAKG PTG +V VRD+RASVGAGFVYLLCGD+ T+PGLPTRPGFYDVD++ +TG+VVGLF Sbjct: 398 IAEKFEVICKEIYGADGVEFSEEAKKKLVVYSQRGYGKLPVCCAKTHLSLSTNPAAKGVPTGFSVTVRDIRASVGAGFVYLLCGDMMTVPGLPTRPGFYDVDLDTETGKVVGLF 511
BLAST of mRNA_C-tenellus_contig10201.1.1 vs. uniprot
Match: A0A4Q5Y295_9DELT (Formate--tetrahydrofolate ligase n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q5Y295_9DELT) HSP 1 Score: 159 bits (403), Expect = 1.990e-47 Identity = 73/114 (64.04%), Postives = 92/114 (80.70%), Query Frame = 1 Query: 10 VQEKMNVVCREMYRASDVEWSPEAEEKVKVYEEAGYGKLPICVAKTQYSLSTDPAAKGAPTGHTVFVRDVRASVGAGFVYLLCGDINTIPGLPTRPGFYDVDIEFDTGRVVGLF 351 ++EK+ +C+E+Y A VE+S AE ++ Y AGYG LP+C+AKTQYSLSTD + KG P G +V VRDVRA+VGAG++Y +CGDI TIPGLPTRPGFYDVD++ DTGRVVGLF Sbjct: 83 LKEKVECICKEIYGADRVEYSELAERRLAAYTAAGYGNLPVCMAKTQYSLSTDASKKGVPRGFSVTVRDVRAAVGAGYIYPICGDIMTIPGLPTRPGFYDVDVDLDTGRVVGLF 196
BLAST of mRNA_C-tenellus_contig10201.1.1 vs. uniprot
Match: A0A2P4X4K6_9STRA (Formate--tetrahydrofolate ligase n=23 Tax=Peronosporaceae TaxID=4777 RepID=A0A2P4X4K6_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.840e-46 Identity = 76/114 (66.67%), Postives = 96/114 (84.21%), Query Frame = 1 Query: 10 VQEKMNVVCREMYRASDVEWSPEAEEKVKVYEEAGYGKLPICVAKTQYSLSTDPAAKGAPTGHTVFVRDVRASVGAGFVYLLCGDINTIPGLPTRPGFYDVDIEFDTGRVVGLF 351 + EK V+C+E+Y A VE+S EA++K+ VY + GYGKLP+C AKT SLST+PAAKG PTG +V VRD+RASVGAGFVYLLCGD+ T+PGLPTRPGFYDVD++ +TG+V+GLF Sbjct: 591 IAEKFEVICKEIYGADGVEFSEEAKKKLAVYSQRGYGKLPVCCAKTHLSLSTNPAAKGVPTGFSVTVRDIRASVGAGFVYLLCGDMMTVPGLPTRPGFYDVDLDTETGKVIGLF 704
BLAST of mRNA_C-tenellus_contig10201.1.1 vs. uniprot
Match: A0A3M6V8G8_9STRA (Formate--tetrahydrofolate ligase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8G8_9STRA) HSP 1 Score: 167 bits (424), Expect = 2.060e-46 Identity = 76/114 (66.67%), Postives = 93/114 (81.58%), Query Frame = 1 Query: 10 VQEKMNVVCREMYRASDVEWSPEAEEKVKVYEEAGYGKLPICVAKTQYSLSTDPAAKGAPTGHTVFVRDVRASVGAGFVYLLCGDINTIPGLPTRPGFYDVDIEFDTGRVVGLF 351 + EK V+C+E+Y A VE+S EA+ K+ VY E GYG LP+C AKT SLSTDP AKG PTG +V VRD+RASVGAGFVYLLCGD+ T+PGLPTRPGFYDVD++ +TG+V+GLF Sbjct: 566 IAEKFEVICKEIYGADSVEFSEEAKMKLAVYSERGYGNLPVCCAKTHLSLSTDPTAKGVPTGFSVTVRDIRASVGAGFVYLLCGDMTTVPGLPTRPGFYDVDLDTETGKVIGLF 679
BLAST of mRNA_C-tenellus_contig10201.1.1 vs. uniprot
Match: A0A4D9CUJ7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUJ7_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.160e-46 Identity = 76/111 (68.47%), Postives = 88/111 (79.28%), Query Frame = 1 Query: 19 KMNVVCREMYRASDVEWSPEAEEKVKVYEEAGYGKLPICVAKTQYSLSTDPAAKGAPTGHTVFVRDVRASVGAGFVYLLCGDINTIPGLPTRPGFYDVDIEFDTGRVVGLF 351 K+ + REMY VE+S AEE++K YE AG+G LP+CVAKTQYSLS D AAKG PTG V VR++RA VGAGF+Y L GDI TIPGLPTRPGFYDVDI+F TGR+VGLF Sbjct: 157 KLETIVREMYGGDGVEYSEVAEEQIKAYESAGFGHLPMCVAKTQYSLSCDAAAKGVPTGFKVAVREIRACVGAGFLYALAGDIMTIPGLPTRPGFYDVDIDFATGRIVGLF 267
BLAST of mRNA_C-tenellus_contig10201.1.1 vs. uniprot
Match: A0A2D4C5S4_PYTIN (Formate--tetrahydrofolate ligase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C5S4_PYTIN) HSP 1 Score: 165 bits (418), Expect = 5.210e-46 Identity = 74/114 (64.91%), Postives = 94/114 (82.46%), Query Frame = 1 Query: 10 VQEKMNVVCREMYRASDVEWSPEAEEKVKVYEEAGYGKLPICVAKTQYSLSTDPAAKGAPTGHTVFVRDVRASVGAGFVYLLCGDINTIPGLPTRPGFYDVDIEFDTGRVVGLF 351 + EK +C+E+Y A+ VE+S EA++K+++Y GYG LP+C AKT SLSTDP AKG PTG TV VRD+RASVGAGFVYLLCGD+ T+PGLPTRPGFYDVD++ +TG+V+GLF Sbjct: 470 IAEKFETICKEIYGAAKVEFSEEAQKKMEIYTARGYGALPVCCAKTHLSLSTDPXAKGVPTGFTVTVRDIRASVGAGFVYLLCGDMMTVPGLPTRPGFYDVDLDTETGKVIGLF 583
BLAST of mRNA_C-tenellus_contig10201.1.1 vs. uniprot
Match: A0A662XUW9_9STRA (Formate--tetrahydrofolate ligase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUW9_9STRA) HSP 1 Score: 166 bits (419), Expect = 7.340e-46 Identity = 76/114 (66.67%), Postives = 93/114 (81.58%), Query Frame = 1 Query: 10 VQEKMNVVCREMYRASDVEWSPEAEEKVKVYEEAGYGKLPICVAKTQYSLSTDPAAKGAPTGHTVFVRDVRASVGAGFVYLLCGDINTIPGLPTRPGFYDVDIEFDTGRVVGLF 351 + EK V+C+E+Y A+ VE+S EA++K+ VY GYG LP+C AKT SLSTDP AKG PTG +V VRDVRAS GAGFVYLLCGD+ T+PGLPTRPGFYDVD++ DTG+V+GLF Sbjct: 528 IAEKFEVICKEIYGAASVEFSEEAKKKLAVYTARGYGTLPVCCAKTHLSLSTDPTAKGVPTGFSVTVRDVRASAGAGFVYLLCGDMMTVPGLPTRPGFYDVDLDADTGKVIGLF 641
BLAST of mRNA_C-tenellus_contig10201.1.1 vs. uniprot
Match: A0A6U4C1F9_9STRA (Formate--tetrahydrofolate ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4C1F9_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.520e-45 Identity = 77/114 (67.54%), Postives = 94/114 (82.46%), Query Frame = 1 Query: 10 VQEKMNVVCREMYRASDVEWSPEAEEKVKVYEEAGYGKLPICVAKTQYSLSTDPAAKGAPTGHTVFVRDVRASVGAGFVYLLCGDINTIPGLPTRPGFYDVDIEFDTGRVVGLF 351 ++EK +C+ +Y A++VE+S AEE++ YE AG+G LPIC+AKTQYSLS D A KG PT TV VRDVRASVGAGF+Y +CGDI TIPGLPTRPGFYDVD++F+TGRVVGLF Sbjct: 535 IKEKTAAICQGIYGAANVEYSELAEERIAAYEAAGFGDLPICIAKTQYSLSCDAALKGVPTDFTVTVRDVRASVGAGFLYFICGDIMTIPGLPTRPGFYDVDLDFETGRVVGLF 648 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10201.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10201.1.1 >prot_C-tenellus_contig10201.1.1 ID=prot_C-tenellus_contig10201.1.1|Name=mRNA_C-tenellus_contig10201.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=111bp MNVVCREMYRASDVEWSPEAEEKVKVYEEAGYGKLPICVAKTQYSLSTDPback to top mRNA from alignment at C-tenellus_contig10201:291..2586+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10201.1.1 ID=mRNA_C-tenellus_contig10201.1.1|Name=mRNA_C-tenellus_contig10201.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2296bp|location=Sequence derived from alignment at C-tenellus_contig10201:291..2586+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10201:291..2586+ >mRNA_C-tenellus_contig10201.1.1 ID=mRNA_C-tenellus_contig10201.1.1|Name=mRNA_C-tenellus_contig10201.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=333bp|location=Sequence derived from alignment at C-tenellus_contig10201:291..2586+ (Choristocarpus tenellus KU2346)back to top |